CmaCh09G003730 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G003730
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr09: 1558864 .. 1559650 (+)
RNA-Seq ExpressionCmaCh09G003730
SyntenyCmaCh09G003730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGCCTCCATCGTCAAGCCTTCCTTTACAAGATTTATTTCCCCCATTTTTTTTGGAGGGCGTGTAAATAGGAGCTGAGCAATTGTTGTGCGTAGGGTAACGACCATCCGTTCTGTTGATATGATTTTATGATCTGCTGTTTTACGTGGTTACTGACTCTTCACTGTTCTCTGATTAACATGATAGAGAATTTAGCAGTCTCTCAAGTGGTGATCAGGGGTGGAATACATTGCAGAAAAAGATTGAGCGGCCTGATCAGAATTCCTGTATGCTACTTTATGCGCTGTTCATTATCAATTTATCATTGCTAAGCGTACACGCAGCTTTAATATTATATGTCATAGAGACCCTCACATAGAATGATGCTTCCAACTTTTTGCATGTTTCTACTTTATTACGATATTTGTTGACTGAGAGTTCAGATTAGACATTCTCGCCACACACTGCACCAGGTCTGATTTGAAAATTGTGTGGTTACGTTTAGTGATGGATATTGTCTTCCAAATTTCTGATTTGACAACGTAATTTTATCTTATCTTGTACTTTCTTATTCAATTTAGTGGGATTCGTTTGTGGCTTCTGATAATTCCAATTTCCATAAAAAAGCACGTATCACCAATCCCAGATCATTTGCAAGGTTGATAGCTGAGGCCGCCGCAATTGCAGCACATGCTTTAGCCATTCAGTCTGTGGATAGGACGGTGGTCTATATCAATGGAGGCGATCGCTTCCCGTTGCAGATAAGCATGCTGCCGTTTCTGTGGACCCAGTTTTTCAGATAA

mRNA sequence

ATGGATGTGCCTCCATCGTCAAGCCTTCCTTTACAAGATTTATTTCCCCCATTTTTTTTGGAGGGCGTAGAATTTAGCAGTCTCTCAAGTGGTGATCAGGGGTGGAATACATTGCAGAAAAAGATTGAGCGGCCTGATCAGAATTCCTGTATGCTACTTTATGCGCTGTTCATTATCAATTTATCATTGCTAAGCGTACACGCAGCTTTAATATTATATATTAGACATTCTCGCCACACACTGCACCAGTGGGATTCGTTTGTGGCTTCTGATAATTCCAATTTCCATAAAAAAGCACGTATCACCAATCCCAGATCATTTGCAAGGTTGATAGCTGAGGCCGCCGCAATTGCAGCACATGCTTTAGCCATTCAGTCTGTGGATAGGACGGTGGTCTATATCAATGGAGGCGATCGCTTCCCGTTGCAGATAAGCATGCTGCCGTTTCTGTGGACCCAGTTTTTCAGATAA

Coding sequence (CDS)

ATGGATGTGCCTCCATCGTCAAGCCTTCCTTTACAAGATTTATTTCCCCCATTTTTTTTGGAGGGCGTAGAATTTAGCAGTCTCTCAAGTGGTGATCAGGGGTGGAATACATTGCAGAAAAAGATTGAGCGGCCTGATCAGAATTCCTGTATGCTACTTTATGCGCTGTTCATTATCAATTTATCATTGCTAAGCGTACACGCAGCTTTAATATTATATATTAGACATTCTCGCCACACACTGCACCAGTGGGATTCGTTTGTGGCTTCTGATAATTCCAATTTCCATAAAAAAGCACGTATCACCAATCCCAGATCATTTGCAAGGTTGATAGCTGAGGCCGCCGCAATTGCAGCACATGCTTTAGCCATTCAGTCTGTGGATAGGACGGTGGTCTATATCAATGGAGGCGATCGCTTCCCGTTGCAGATAAGCATGCTGCCGTTTCTGTGGACCCAGTTTTTCAGATAA

Protein sequence

MDVPPSSSLPLQDLFPPFFLEGVEFSSLSSGDQGWNTLQKKIERPDQNSCMLLYALFIINLSLLSVHAALILYIRHSRHTLHQWDSFVASDNSNFHKKARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQISMLPFLWTQFFR
Homology
[Close]
BLAST of CmaCh09G003730 vs. NCBI nr
Match: KAG6591496.1 (G-protein coupled receptor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 7.3e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 84  WDSFVASDNSNFHKKARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQ 143
           WDSFVASDNSNFHKKARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQ
Sbjct: 334 WDSFVASDNSNFHKKARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQ 393

Query: 144 ISMLPFLWTQFFR 157
           ISMLPFLWTQFFR
Sbjct: 394 ISMLPFLWTQFFR 406

[Close]
BLAST of CmaCh09G003730 vs. NCBI nr
Match: KAG7024381.1 (hypothetical protein SDJN02_13195, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.2 bits (365), Expect = 4.7e-31
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 84  WDSFVASDNSNFHKKARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQ 143
           WDSFVASDNSNFHK+ARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQ
Sbjct: 30  WDSFVASDNSNFHKEARITNPRSFARLIAEAAAIAAHALAIQSVDRTVVYINGGDRFPLQ 89

Query: 144 ISMLPFLWTQFFR 157
           IS+LPFLWTQFFR
Sbjct: 90  ISLLPFLWTQFFR 102

The following BLAST results are available for this feature:
BLAST of CmaCh09G003730 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G003730 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G003730 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591496.17.3e-32100.00G-protein coupled receptor 1, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7024381.14.7e-3197.26hypothetical protein SDJN02_13195, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh09G003730 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G003730.1CmaCh09G003730.1mRNA