CmaCh09G003380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G003380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr09: 1395849 .. 1400742 (-)
RNA-Seq Expression	CmaCh09G003380
Synteny	CmaCh09G003380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATAAATTCGTGGTGCCGGCGTGGGAGTTGAAGAATCGACTTGGATAGAAACCGGTTTGGTTGAAGTTGTTGGTGAAGAATTCAACCACAACAGTTCACGAACAACGTCCATTCACATCATCTCCTAAGGGCTTTTGAGGCATTTCCAAATTGCGAACGAGGAGTTCAGGTTTCCTTTGTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTCTTCTTTATTTGATCATTGCTAGGAGATCAATCTTTGGAGTGTTCATTGTGCTAATTAAACAATACGTTCGATGTGGATCTTCCAGTAAAAGTGCTGCTGCCGAGTCCGACACCTCGTTTGATCTACGCAAGTAAGTATTTGCACCCATAGTCCGACACCTCGTTCAATCTATCAAATGAACTGAACGATTCGCGCTTTAGTGAAGTTGCATCGTTATCTCATTCGAATTTTAGAACTAAGTATTACTTAGAACAGTGTCCAAACTTTACTCGGTTAGGAAGGGGGAAGAGAAGTTTGTGGCATGTTACCTTGTTTTATGATATATAATTTATTCCATGTCGTATTTTCTAGATTCTGATCGTTATTTAAAGCACACGATTAATAATCAGTATTAGGCTTGAACTTTTCAAGCGTAGTGCATTTTTTCATCAAGACAGATTTTATCTTATTTTACTTTCTCCCATTGTAGTGGCTCAACAACACAGAGTTATAATACAGAATAGCCATGGTGAAAAGCTTGTTGGAATCCTGCATGATACCGGATCAAGCGAGCTCGTTATTGTTTGCCATGGATTTCAGTCCTCGAAGGTTTTATATATTAGATTCTTTTTTTATGGTTCTGACTCGATTCTTTTCTTTCTTTGTATGAGTAAATTATCTATCTGTCTGCTTGGACTCACATGATATGTGAAAGTGTCCTCCCATGTGTTTTTCCATTTCCATTGAGAAAACTACCTTAAGGTACTTTACATTGTGTTTTTGAGTTGTGATTTTGTTTTTATGTTCAATTATAATGTGTTGTTAAGAATGTTGTTGAGTTCAAATGAATCAAGATTAACATTTCTGGGATTTGTTCGCGATGCATTACATTAGAGTTTTCGTTATGATGAGGGCTTGCTATCCTTTTCTCTTTCAAATTCTTCTCGATCTTGGTTGACTTGATATTTTGAACTGTCTTTTGTAGGATCGCATTCCTATGGTGAACCTCGCCACTGCTTTAGAGAAAGAAGGGATGAGTGTTTTCCGTTTTGACTTTGCTGGAAACGGGTAAGATCTTAGGACGGGTAATGGACGAGGTAATGTAGTTTTGCATGTGGGAAAAATCATAGAACACGTCTCTTCACCTTATGATTTGAAATTTATGGTTGAAGTTTACCAGTCTAATTAATAAGAAGGGTGCTCCTGTAAATGTGAGAATTTACAATTGTATGCTTATATATCTTACTTTAACGATGTCAATTTTCCACCATTTTGATTCTTAAAGAATTAAGCATATTTATTTGCTCCAAAGCTGAAGTTTCTAAAAGTTTCTTGAAGAAGTATAATACCATCAAAGCTTCTCCATGTTTATATGTCCATAACTTCAGTGGAAACTCTTCTTTATAGACCGTCTTTATTCCCATGTATCTTGCATGCTATAGTGCATATTAACTATGTATAATGTGTTTTTTTTATTGAATCCGAGCAACAATCTTTAAGAAAAGAAGGTTATTGTTATAGTTTTGGTTTCTGTTTTCTTTTTTATTCTATGATTTGTTTCAAATACAGGTTTGGGTCTGCTTCTCTGGCTATTGTGGGCATTAGGAATAATATCATTTGATACAAACATTTATCCTCAGTCTCAAATTTAGATAGCAACGGACAACCACGTTGTCTAAGTTCTCACGTATCTAAAAATTATTGCTTAAAAATGCTCTATGTTCTAATTACAAGGAAAACCATGCTATGCCATAGAAATTCCCAGTTGCGTACAATTTGATCGTGATTGTATACAATCGAGCACCCAAACTACTTTTTTGTTCTATGTTTGGCAGAGAAAGTGAAGGTTCATTCCAGTATGGCAACTACCGCAGAGAAGCTGATGATTTACGTGCTGTTGTGCAACATTTCCATGGAAAGGAACATACAGTGACCGCAATAATTGGACACAGTAAAGGTCTTTATCCTTGCTCATTCTGGTGAAATGAATCTAGTATAAAGTGCAAATTTGGGAGTTTGTATAATTTATTGAAGACATAATCAGCACTTTGAAAACATTTCCATGGCAAGGAACATATGGTAACCGCCAATTTACTTGTTATTTTGTTGCAGGGGGGAATGTAGTTCTCTTGTATGCCTCAAAGTATAGAGACATTCATACAGTTGTTAATATATCTGGCCGATTTAACCTTGAAAGAGGGATTGAAGGTCGCTTAGGTAAAGACTTTTTGCAAAGAATTAAGCAAAAAGGGTTTATTGATGTCCAGAATAGAAGAGGTAAGCCATCAAATTCTAGTTTCTGTTTCAACATCACCGAGATTCCACAAAATGACACAAGTTCTTAAGTGATCTTCTCCGTTTCTGCTTTACAGAAACATTCCAGCTTCCTCATTATAATTAGAAACTAATTTCTTTTATTTCATGTTTTTGTAATCAGGGAAGATCGAATATCGTGTCACTGAAGAAAGTTTAATGGACCGACTAACTACCGAGGTTCATGCAGCATGCTCAGCAATTCAGCGTGACTGTAGGTGAGGAATGTAGCTCTTCTATTTAATCCTTTCTTTTAGGATCATGACAATGGAATGAATGCTGGGCTGGGCCACCTCGAATGGTATGAGCCATATCCTTAATAACTTATCCAATTAGCACATATTAACCGTGATGTAGGTAAGTCGGATGGAAAGTGGTGTTTGTAGTGGAGGACGGTGGAACCCGCTAATATGAAAAGCAAGAGAAACCCCACTTTAGATTTGCTTGATTCTTCATTTTTATTCACTTTTCTTCTTCAGGGTTTTGACGGTTCATGGATCAATGGATAAAATTGTACCAGCTGAAGATGCTGTCGAGTTTTCCAAGTCCATAGCAAATCATGTTCTATGCATCATGGAAGGGGCTGATCATGAATATACTGCTCACCAAGATGAATTGGCTTCAGTTGTTGTGAACTTCGTTAAAGCTAATCTTCATCTGCACAAAGATACAACCGAGCCGCAGCTGTGCAGAAAGCCCGACAGAGGTGGTCGTTCCTGTTTGTAAATCTCAATTCCTCCTTCAAGATGTAAGAACAAGAAGCACTTTCTTTGATTGAGAAGATTTTAGTCAGATTCTGATGTTATTTCCAAACTTGTAATCATAATTTATACTCCGATGGTGAAATTTGCAGATTAGATGATAAAAGAGATGATTCTAGAAAAGGGTTGCATGCACAAAAGGCATCTTGGCAGTGGGAGTAGTCCCGATCAATACACATCAACAAAGGGTTTGGTTTCTTTACAGAAAAGAAAAGAAGCACGCGACAATGAGAGCGAGAAGGTCTGATTTACAAGTGGCATTACAAAACTTGAAGAAGCAAAAAAGAAAAGTGCAGCAAAGAACACCCCAACCCCAAAGTTGAAAGAAGAATGAAAGGGGTTTCTTCATGAACCCATAACTAAAACTTAACAATTGAAGATTCTTCTTCCACTTTTGCAGGCGATCATTCTCAGAGACAGTAAAAGTAAGGCAGTGAAACTGATGGAGCCCACCAACAAATACATGGCGCAGCTACTCTGTTTGATGATTATGCCTTACAAATTTGAGGTAACCTCATTTTTGTCCTTTTTCTTTGTTCTTTCTCTCTCTTTTTTTACCATGAATCTTAAGCTTCTCGTTGTCTTAGGATTCATTTGGGTAATATTTTGTTGGCTGTTCTAAACTTTTCTATTTTTGAAAGGAAATTTAAAAAAAAAAAGAAAATTGATATATTGTCTTTTTTACAAAAATTAGAAAAAGAAAAAAAGTTTGACTTCAATATCCTTTTTTTTTTTTTTTTTTTTTTCTGGAGGCTACGGAAATCGAATTTATTCTTAGAAAGCCTGAAGAAAAAGAAGTGTAGTTATTTTTAGTACATTATGAATCTATATTTCATACAATTTCTTGTCATTTTGATTGAAATAAATTCCGTAGAATAAGGCACAGTTGAATCATTTGAAGAAAAAAGGTTGGGATTATGATTTGTAATTTATAGTAAATTCTTAATCTCTAAACCCCTCTGAAAAATAATAATAATAATAATGAGAATTAAAAATTAAAAATTAAAAAAAAAAAAGGGAAAATGTAGAGCTCCTAAACCTGACATTATTCCAACTGCCCTTCCCTCCCACGGCATCGTCACGCCCTCCTCACGTGCCTCCTAATTTCACTCTACATAATTATTACATTAATGCATATTAATCAAACACAGCTTAGGGCGCTGTGTGCGCGTATTCATTAATCACTTTCTCCTAACTCACTACAAAAATCAATGTCCTTTATTATTATTATTTTTTTATTTTTTATTTTTATTTTTAAGAGGGGAGCTATTAATTACTAGTGTCACAAATCTGACACGAAATGTTATTTATTTATTGACCTAATAGGGCGACCCAAGTGTTTAAGAACCC

mRNA sequence

GATATAAATTCGTGGTGCCGGCGTGGGAGTTGAAGAATCGACTTGGATAGAAACCGGTTTGGTTGAAGTTGTTGGTGAAGAATTCAACCACAACAGTTCACGAACAACGTCCATTCACATCATCTCCTAAGGGCTTTTGAGGCATTTCCAAATTGCGAACGAGGAGTTCAGTAAAAGTGCTGCTGCCGAGTCCGACACCTCGTTTGATCTACGCAATGGCTCAACAACACAGAGTTATAATACAGAATAGCCATGGTGAAAAGCTTGTTGGAATCCTGCATGATACCGGATCAAGCGAGCTCGTTATTGTTTGCCATGGATTTCAGTCCTCGAAGGATCGCATTCCTATGGTGAACCTCGCCACTGCTTTAGAGAAAGAAGGGATGAGTGTTTTCCGTTTTGACTTTGCTGGAAACGGAGAAAGTGAAGGTTCATTCCAGTATGGCAACTACCGCAGAGAAGCTGATGATTTACGTGCTGTTGTGCAACATTTCCATGGAAAGGAACATACAGTGACCGCAATAATTGGACACAGTAAAGGGGGGAATGTAGTTCTCTTGTATGCCTCAAAGTATAGAGACATTCATACAGTTGTTAATATATCTGGCCGATTTAACCTTGAAAGAGGGATTGAAGGTCGCTTAGGTAAAGACTTTTTGCAAAGAATTAAGCAAAAAGGGTTTATTGATGTCCAGAATAGAAGAGGGAAGATCGAATATCGTGTCACTGAAGAAAGTTTAATGGACCGACTAACTACCGAGGTTCATGCAGCATGCTCAGCAATTCAGCGTGACTGTAGGGTTTTGACGGTTCATGGATCAATGGATAAAATTGTACCAGCTGAAGATGCTGTCGAGTTTTCCAAGTCCATAGCAAATCATGTTCTATGCATCATGGAAGGGGCTGATCATGAATATACTGCTCACCAAGATGAATTGGCTTCAGTTGTTGTGAACTTCGTTAAAGCTAATCTTCATCTGCACAAAGATACAACCGAGCCGCAGCTGTGCAGAAAGCCCGACAGAGGTGGTCGTTCCTGTTTGTAAATCTCAATTCCTCCTTCAAGATATTAGATGATAAAAGAGATGATTCTAGAAAAGGGTTGCATGCACAAAAGGCATCTTGGCAGTGGGAGTAGTCCCGATCAATACACATCAACAAAGGGTTTGGTTTCTTTACAGAAAAGAAAAGAAGCACGCGACAATGAGAGCGAGAAGGCGATCATTCTCAGAGACAGTAAAAGTAAGGCAGTGAAACTGATGGAGCCCACCAACAAATACATGGCGCAGCTACTCTGTTTGATGATTATGCCTTACAAATTTGAGGGCGACCCAAGTGTTTAAGAACCC

Coding sequence (CDS)

ATGATAAAAGAGATGATTCTAGAAAAGGGTTGCATGCACAAAAGGCATCTTGGCAGTGGGAGTAGTCCCGATCAATACACATCAACAAAGGGTTTGGTTTCTTTACAGAAAAGAAAAGAAGCACGCGACAATGAGAGCGAGAAGGCGATCATTCTCAGAGACAGTAAAAGTAAGGCAGTGAAACTGATGGAGCCCACCAACAAATACATGGCGCAGCTACTCTGTTTGATGATTATGCCTTACAAATTTGAGGGCGACCCAAGTGTTTAA

Protein sequence

MIKEMILEKGCMHKRHLGSGSSPDQYTSTKGLVSLQKRKEARDNESEKAIILRDSKSKAVKLMEPTNKYMAQLLCLMIMPYKFEGDPSV

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh09G003380 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh09G003380 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh09G003380 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh09G003380 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G003380.1	CmaCh09G003380.1	mRNA