CmaCh08G011460 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G011460
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionHAD-like domain containing protein
LocationCma_Chr08: 7070223 .. 7070469 (+)
RNA-Seq ExpressionCmaCh08G011460
SyntenyCmaCh08G011460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGTTTAAATTGAAAATGATTAAATTATTTTTTAGAAAGTTATTTATATGGTGTGATTGGATGAAGGTGGGGAAGCTCGTGAAGAATATAGAGCCGGATTATGTAGTGGAAACGGTACATAATTTGTCACTAGAAATTCCAGAGATATGGGTAAATGCAAAATTAGATAATGGCGATGGAATGATCCATCAGAATCGAAACGACGTCGATTCTATTCTCATGAAAACAGCTATCGGTGCTTAA

mRNA sequence

ATGAACGTGGGGAAGCTCGTGAAGAATATAGAGCCGGATTATGTAGTGGAAACGGTACATAATTTGTCACTAGAAATTCCAGAGATATGGGTAAATGCAAAATTAGATAATGGCGATGGAATGATCCATCAGAATCGAAACGACGTCGATTCTATTCTCATGAAAACAGCTATCGGTGCTTAA

Coding sequence (CDS)

ATGAACGTGGGGAAGCTCGTGAAGAATATAGAGCCGGATTATGTAGTGGAAACGGTACATAATTTGTCACTAGAAATTCCAGAGATATGGGTAAATGCAAAATTAGATAATGGCGATGGAATGATCCATCAGAATCGAAACGACGTCGATTCTATTCTCATGAAAACAGCTATCGGTGCTTAA

Protein sequence

MNVGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA
Homology
BLAST of CmaCh08G011460 vs. ExPASy TrEMBL
Match: A0A6J1KIK0 (uncharacterized protein LOC111494281 OS=Cucurbita maxima OX=3661 GN=LOC111494281 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA
Sbjct: 206 VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 263

BLAST of CmaCh08G011460 vs. ExPASy TrEMBL
Match: A0A6J1EVA9 (uncharacterized protein LOC111436918 OS=Cucurbita moschata OX=3662 GN=LOC111436918 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.8e-19
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIE DY VETVHNL+ EIPEIWVNAKLDN D MIHQNRNDVDSILM+TAI A
Sbjct: 200 VGKLVKNIEADYAVETVHNLAQEIPEIWVNAKLDNDDEMIHQNRNDVDSILMETAISA 257

BLAST of CmaCh08G011460 vs. ExPASy TrEMBL
Match: A0A0A0KEU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G423990 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGK VK+ E DYVVETVHNL   IPEIW+N  LD  D M++++RNDVDSI M   +GA
Sbjct: 200 VGKTVKSKEADYVVETVHNLVQAIPEIWMNTDLDGDDEMMNRSRNDVDSIHMAATVGA 257

BLAST of CmaCh08G011460 vs. ExPASy TrEMBL
Match: A0A6J1CA04 (uncharacterized protein LOC111009574 OS=Momordica charantia OX=3673 GN=LOC111009574 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-10
Identity = 33/58 (56.90%), Postives = 47/58 (81.03%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGK VK+ E DY +ETVHNL+  IPEIWV+ + D+ D MI+++R++VDS+L+ TA+GA
Sbjct: 200 VGKAVKSKEADYAMETVHNLAQAIPEIWVSVESDDDDEMINRSRSEVDSVLVATAVGA 257

BLAST of CmaCh08G011460 vs. ExPASy TrEMBL
Match: A0A6P4A421 (uncharacterized protein LOC107423015 isoform X3 OS=Ziziphus jujuba OX=326968 GN=LOC107423015 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-07
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGK  K+ E DYV+ET++NL+  IPEIWV ++ D GD  I + R+++DSIL  TA+GA
Sbjct: 210 VGKAAKSKEADYVLETINNLAQVIPEIWV-SESDGGDQRISRTRSEIDSILSTTAVGA 266

BLAST of CmaCh08G011460 vs. NCBI nr
Match: XP_022999954.1 (uncharacterized protein LOC111494281 [Cucurbita maxima])

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA
Sbjct: 206 VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 263

BLAST of CmaCh08G011460 vs. NCBI nr
Match: KAG6593894.1 (hypothetical protein SDJN03_13370, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19
Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIE DY VETVHNL+ EIPEIWVNAKLDN D MIHQNRNDVDSILM+TAIGA
Sbjct: 200 VGKLVKNIEADYAVETVHNLAQEIPEIWVNAKLDNDDEMIHQNRNDVDSILMETAIGA 257

BLAST of CmaCh08G011460 vs. NCBI nr
Match: XP_023514947.1 (uncharacterized protein LOC111779108 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.0 bits (258), Expect = 4.6e-19
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIE DY VETVHNL+ EIPEIW+N KLDN DGMI+QNRNDVDSILM+TAIGA
Sbjct: 200 VGKLVKNIEADYAVETVHNLAQEIPEIWINVKLDNDDGMINQNRNDVDSILMETAIGA 257

BLAST of CmaCh08G011460 vs. NCBI nr
Match: XP_022930478.1 (uncharacterized protein LOC111436918 [Cucurbita moschata])

HSP 1 Score: 103.2 bits (256), Expect = 7.9e-19
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIE DY VETVHNL+ EIPEIWVNAKLDN D MIHQNRNDVDSILM+TAI A
Sbjct: 200 VGKLVKNIEADYAVETVHNLAQEIPEIWVNAKLDNDDEMIHQNRNDVDSILMETAISA 257

BLAST of CmaCh08G011460 vs. NCBI nr
Match: KAG7026240.1 (SPAC24B11.05 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.8 bits (247), Expect = 8.7e-18
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAKLDNGDGMIHQNRNDVDSILMKTAIGA 61
           VGKLVKNIE DY VETVHNL+ EIPEIWVNAKLDN D MI+ NRNDVDSIL++TAIGA
Sbjct: 175 VGKLVKNIEADYAVETVHNLAQEIPEIWVNAKLDNDDEMINHNRNDVDSILLETAIGA 232

BLAST of CmaCh08G011460 vs. TAIR 10
Match: AT2G32150.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 40.8 bits (94), Expect = 4.5e-04
Identity = 20/62 (32.26%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 3   VGKLVKNIEPDYVVETVHNLSLEIPEIWVNAK----LDNGDGMIHQNRNDVDSILMKTAI 61
           VG+  K  + DY VETV  ++  +PEIW  A      D G   I +++++++ +    A+
Sbjct: 202 VGRAEKTKDADYAVETVTEIATAVPEIWATATATGGFDVGGERIRRSKSELEGMASIAAV 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KIK01.8e-24100.00uncharacterized protein LOC111494281 OS=Cucurbita maxima OX=3661 GN=LOC111494281... [more]
A0A6J1EVA93.8e-1986.21uncharacterized protein LOC111436918 OS=Cucurbita moschata OX=3662 GN=LOC1114369... [more]
A0A0A0KEU01.1e-1062.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G423990 PE=4 SV=1[more]
A0A6J1CA043.2e-1056.90uncharacterized protein LOC111009574 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6P4A4212.6e-0753.45uncharacterized protein LOC107423015 isoform X3 OS=Ziziphus jujuba OX=326968 GN=... [more]
Match NameE-valueIdentityDescription
XP_022999954.13.7e-24100.00uncharacterized protein LOC111494281 [Cucurbita maxima][more]
KAG6593894.11.6e-1987.93hypothetical protein SDJN03_13370, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023514947.14.6e-1984.48uncharacterized protein LOC111779108 [Cucurbita pepo subsp. pepo][more]
XP_022930478.17.9e-1986.21uncharacterized protein LOC111436918 [Cucurbita moschata][more]
KAG7026240.18.7e-1882.76SPAC24B11.05 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
AT2G32150.14.5e-0432.26Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G011460.1CmaCh08G011460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity