CmaCh08G011060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G011060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH92-like
Location	Cma_Chr08: 6865949 .. 6867038 (-)
RNA-Seq Expression	CmaCh08G011060
Synteny	CmaCh08G011060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGGATTTCCGGTGGAATTCTGGCATACTGATCTCTATTGGCTCGACACTCCAATCTCCGTCTCCGACCCCGCTCCGGGACAGATAAGTGCTTTCGTACCATATCTGCCCCAACCCGCCATCGGATCGGGGCAAAAAAACAATCCCATCGCCGCCACCTATTCGGAGAACATCCACAAGAGAGTGATCAAGTACTGGAGAAAGAAGTGGCAAGAAAAAAAGAAACCAGCTGAAATGGGAGATCTAGAGAGAGAAAAAAGTCACCAACACATGCTGAACGAGAGGATGAGGAGAGAGAAACATAGACGGAGCTATTCTGAACTCCACTCTATGCTCCCAAGTAAAACTAAGGTCCTGTCAATATTATACTATTATTATACTGAGTCATAATTATTAACTGGTCTAATAAGAGCCAAAACTTTACACAGACGATGGGTTGTCGTTGATATTGTATGTGTTATTTTGTTTTTGTAGAACGACAAGAATTCAATCGTTCAAATGGCGGCGAGGACGATAGAGGAGCTGAAAGCCTCAGAGGGAATGCTAAAGAAGAGAAATATAGAGCTGGAAATGGCGTTATCAGCAAAGAAGAGAAAGCAAGAGAAGGGGACGACACCAATTAGGGTTGCAGTGGCTAACCCTTCATCTGGGATAAACTCTATGCTGGGTGTTCTTAATCTTCTCAAAACTGTTGGAGTGAATGCCAAAGCTATTCATGCCACTTTCTTGGACTCTCAGTTTTCGACCCACATCGCCATTGAATCTCACGTAAGATCACCCGACTCTTTTAAATTTGTGTCAAATAGGTAACATAACTCTATTTAATAGAGTAAACAATTTGTTCCTAAAATATCACAATCTTTAAGACGTGTTTAAGTTTTAAAGACGAACGTATTGTGTCGGACTTTGTGTAATAATTTATGGATTTGGAAGAAATGTTGGTTTGTTTGGTTGGTTTGATGGGCAGATGAGAGCTGCCGAAGTGGAAAGAGCGTTGCAAATGACGCTAAGCGAAGCAGAGAGGAAATTTCAAAGGCAATGCGAGGAAGGTTCCCATGACGTAAAAGATGGGTCCACAATTTGA

mRNA sequence

ATGGATGATGGATTTCCGGTGGAATTCTGGCATACTGATCTCTATTGGCTCGACACTCCAATCTCCGTCTCCGACCCCGCTCCGGGACAGATAAGTGCTTTCGTACCATATCTGCCCCAACCCGCCATCGGATCGGGGCAAAAAAACAATCCCATCGCCGCCACCTATTCGGAGAACATCCACAAGAGAGTGATCAAGTACTGGAGAAAGAAGTGGCAAGAAAAAAAGAAACCAGCTGAAATGGGAGATCTAGAGAGAGAAAAAAGTCACCAACACATGCTGAACGAGAGGATGAGGAGAGAGAAACATAGACGGAGCTATTCTGAACTCCACTCTATGCTCCCAAGTAAAACTAAGAACGACAAGAATTCAATCGTTCAAATGGCGGCGAGGACGATAGAGGAGCTGAAAGCCTCAGAGGGAATGCTAAAGAAGAGAAATATAGAGCTGGAAATGGCGTTATCAGCAAAGAAGAGAAAGCAAGAGAAGGGGACGACACCAATTAGGGTTGCAGTGGCTAACCCTTCATCTGGGATAAACTCTATGCTGGGTGTTCTTAATCTTCTCAAAACTGTTGGAGTGAATGCCAAAGCTATTCATGCCACTTTCTTGGACTCTCAGTTTTCGACCCACATCGCCATTGAATCTCACATGAGAGCTGCCGAAGTGGAAAGAGCGTTGCAAATGACGCTAAGCGAAGCAGAGAGGAAATTTCAAAGGCAATGCGAGGAAGGTTCCCATGACGTAAAAGATGGGTCCACAATTTGA

Coding sequence (CDS)

ATGGATGATGGATTTCCGGTGGAATTCTGGCATACTGATCTCTATTGGCTCGACACTCCAATCTCCGTCTCCGACCCCGCTCCGGGACAGATAAGTGCTTTCGTACCATATCTGCCCCAACCCGCCATCGGATCGGGGCAAAAAAACAATCCCATCGCCGCCACCTATTCGGAGAACATCCACAAGAGAGTGATCAAGTACTGGAGAAAGAAGTGGCAAGAAAAAAAGAAACCAGCTGAAATGGGAGATCTAGAGAGAGAAAAAAGTCACCAACACATGCTGAACGAGAGGATGAGGAGAGAGAAACATAGACGGAGCTATTCTGAACTCCACTCTATGCTCCCAAGTAAAACTAAGAACGACAAGAATTCAATCGTTCAAATGGCGGCGAGGACGATAGAGGAGCTGAAAGCCTCAGAGGGAATGCTAAAGAAGAGAAATATAGAGCTGGAAATGGCGTTATCAGCAAAGAAGAGAAAGCAAGAGAAGGGGACGACACCAATTAGGGTTGCAGTGGCTAACCCTTCATCTGGGATAAACTCTATGCTGGGTGTTCTTAATCTTCTCAAAACTGTTGGAGTGAATGCCAAAGCTATTCATGCCACTTTCTTGGACTCTCAGTTTTCGACCCACATCGCCATTGAATCTCACATGAGAGCTGCCGAAGTGGAAAGAGCGTTGCAAATGACGCTAAGCGAAGCAGAGAGGAAATTTCAAAGGCAATGCGAGGAAGGTTCCCATGACGTAAAAGATGGGTCCACAATTTGA

Protein sequence

MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQRQCEEGSHDVKDGSTI

Homology

[Close]

BLAST of CmaCh08G011060 vs. ExPASy Swiss-Prot
Match: Q9FIX5 (Transcription factor bHLH92 OS=Arabidopsis thaliana OX=3702 GN=BHLH92 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-26
Identity = 87/229 (37.99%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 9   FWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENIHKRVIKYW 68
           FW   +  +    SVS P     SAF  Y+    +   +  +P  ++   N+ KR++   
Sbjct: 16  FWDLIVADISGDRSVSVPIR---SAFRSYMKDTEL---RMMSPKISSSKVNVKKRMVNLL 75

Query: 69  RKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKNDKNSIVQM 128
           RK W+EKK        E+E+S +HML ER RREK ++SY  LHS+LP  TKNDKNSIV+ 
Sbjct: 76  RKNWEEKKNTVAP---EKERSRRHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEK 135

Query: 129 AARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGINSMLGVLNL 188
           A   I +L+  +  L +R I++    SAK    E   T +RV +  P SG++SML  L+ 
Sbjct: 136 AVDEIAKLQRLKKELVRR-IKVIEEKSAKDGHDEMSETKVRVNLKEPLSGLDSMLEALHY 195

Query: 189 LKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERK 238
           LK++G   K +HA F   +FS  + IE+ +R  EVE+ ++  L E E K
Sbjct: 196 LKSMGTKLKTVHANFSPQEFSATMTIETQIRGEEVEKRVERRLQETEWK 234

[Close]

BLAST of CmaCh08G011060 vs. ExPASy Swiss-Prot
Match: Q75KV9 (Transcription factor BHLH148 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-18
Identity = 60/163 (36.81%), Postives = 100/163 (61.35%), Query Frame = 0


Query: 74  EKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKNDKNSIVQMAARTI 133
           ++++  +  D+E  +  +HM+ ER RREK  +SY++L++M+ S++K DKNSIVQ AA  I
Sbjct: 114 QRRRRGQGADVESSRGFRHMMRERQRREKLSQSYADLYAMVSSRSKGDKNSIVQSAAIYI 173

Query: 134 EELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGINSMLGVLNLLKTVG 193
            ELK +   L++RN EL+  +     +Q   T  ++  V  PSS I+SM+  L  LK + 
Sbjct: 174 HELKVARDQLQRRNEELKAQIMGHDEQQPCVT--VQFEVDEPSSSIDSMIAALRRLKGMS 233

Query: 194 VNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAER 237
           V A+ I ++   ++  T + +E+ + A EVE+A++  L E ER
Sbjct: 234 VKARGIRSSMSGNRLWTEMNVETTIAACEVEKAVEEALKEVER 274

[Close]

BLAST of CmaCh08G011060 vs. ExPASy Swiss-Prot
Match: Q9LTS4 (Putative transcription factor bHLH041 OS=Arabidopsis thaliana OX=3702 GN=BHLH41 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.3e-04
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 91  QHMLNERMRREKHRRSYSELHSMLPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIEL 150
           QHM++ER RREK   S+  L S+LP  TK DK S++ +A   +  L+     L +RN E+
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREV 348

Query: 151 EMALSAKK 159
           E  L+ ++
Sbjct: 349 EAKLAGER 356

[Close]

BLAST of CmaCh08G011060 vs. ExPASy TrEMBL
Match: A0A6J1KK97 (transcription factor bHLH92-like OS=Cucurbita maxima OX=3661 GN=LOC111494781 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.3e-136
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENI 60
           MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENI
Sbjct: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENI 60

Query: 61  HKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKN 120
           HKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKN
Sbjct: 61  HKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKN 120

Query: 121 DKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGIN 180
           DKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGIN
Sbjct: 121 DKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGIN 180

Query: 181 SMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQR 240
           SMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQR
Sbjct: 181 SMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQR 240

Query: 241 QCEEGSHDVKDGSTI 256
           QCEEGSHDVKDGSTI
Sbjct: 241 QCEEGSHDVKDGSTI 255

[Close]

BLAST of CmaCh08G011060 vs. ExPASy TrEMBL
Match: A0A6J1EQ49 (transcription factor bHLH92-like OS=Cucurbita moschata OX=3662 GN=LOC111436803 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.8e-118
Identity = 227/246 (92.28%), Postives = 235/246 (95.53%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIA-----AT 60
           MDDGFPVEFWHTDL+WLD PI VSDPAPGQISAFVPYLPQP IGS QKNNPI      AT
Sbjct: 1   MDDGFPVEFWHTDLHWLDPPIPVSDPAPGQISAFVPYLPQPTIGSRQKNNPITATTIIAT 60

Query: 61  YSENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLP 120
           YSEN+HKRVI+YWRK+WQEKKKPAEMGDLERE+SH+HMLNERMRREKHRRSYSELHSMLP
Sbjct: 61  YSENVHKRVIEYWRKQWQEKKKPAEMGDLERERSHRHMLNERMRREKHRRSYSELHSMLP 120

Query: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180
           SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP
Sbjct: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180

Query: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAE 240
           SSGINSMLGVLNLLKTVGVNAKAIHATFLDS+FSTHIAI+SHMRAAEVERALQMTLSEAE
Sbjct: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAIDSHMRAAEVERALQMTLSEAE 240

Query: 241 RKFQRQ 242
           RK QRQ
Sbjct: 241 RKLQRQ 246

[Close]

BLAST of CmaCh08G011060 vs. ExPASy TrEMBL
Match: A0A5A7UQX2 (Transcription factor bHLH92 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00150 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.5e-75
Identity = 166/267 (62.17%), Postives = 195/267 (73.03%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISV------SDPAPGQISAFVPYLPQPAIG-SGQKNNPIA 60
           MDD FPVEFWH D +WLD PISV      S P   QISAF+PYL  P  G  GQ NN IA
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  ATY--------SENIHKRVIKYWRKKWQEKKK-PAEMGDLEREKSHQHMLNERMRREKHR 120
            T         S N++KR+I+YW K W EKK+ P   GDLEREK H+HMLNERMRREK +
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 RSYSELHSMLPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG 180
           +SY  LHSMLP  TKNDKNSIVQ AARTI+E+K  E  LK+RN ELEM ++   +K+EK 
Sbjct: 121 QSYLALHSMLPKNTKNDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIAIAMKKKEKE 180

Query: 181 TTPIRVAVANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVE 240
              I VA+ N S GINSML VLN+LKTVGVN+KAIHATF +SQFS  +AI++HM AAEVE
Sbjct: 181 KRIINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQLAIDTHMGAAEVE 240

Query: 241 RALQMTLSEAERKFQRQCEEGSHDVKD 252
           RALQ+TL+EAERKF+RQ  EGS ++KD
Sbjct: 241 RALQVTLNEAERKFRRQYSEGSKEIKD 267

[Close]

BLAST of CmaCh08G011060 vs. ExPASy TrEMBL
Match: A0A1S3CPU0 (transcription factor bHLH92 OS=Cucumis melo OX=3656 GN=LOC103502857 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.5e-75
Identity = 166/267 (62.17%), Postives = 195/267 (73.03%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISV------SDPAPGQISAFVPYLPQPAIG-SGQKNNPIA 60
           MDD FPVEFWH D +WLD PISV      S P   QISAF+PYL  P  G  GQ NN IA
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  ATY--------SENIHKRVIKYWRKKWQEKKK-PAEMGDLEREKSHQHMLNERMRREKHR 120
            T         S N++KR+I+YW K W EKK+ P   GDLEREK H+HMLNERMRREK +
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 RSYSELHSMLPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG 180
           +SY  LHSMLP  TKNDKNSIVQ AARTI+E+K  E  LK+RN ELEM ++   +K+EK 
Sbjct: 121 QSYLALHSMLPKNTKNDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIAIAMKKKEKE 180

Query: 181 TTPIRVAVANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVE 240
              I VA+ N S GINSML VLN+LKTVGVN+KAIHATF +SQFS  +AI++HM AAEVE
Sbjct: 181 KRIINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQLAIDTHMGAAEVE 240

Query: 241 RALQMTLSEAERKFQRQCEEGSHDVKD 252
           RALQ+TL+EAERKF+RQ  EGS ++KD
Sbjct: 241 RALQVTLNEAERKFRRQYSEGSKEIKD 267

[Close]

BLAST of CmaCh08G011060 vs. ExPASy TrEMBL
Match: A0A6J1H311 (transcription factor bHLH92 OS=Cucurbita moschata OX=3662 GN=LOC111459950 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 8.8e-73
Identity = 153/247 (61.94%), Postives = 188/247 (76.11%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPIS----VSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATY 60
           MDD FPVEFWH DL+WLD PIS    VS PA  Q SAFVPYL +P     QKN   A   
Sbjct: 1   MDDTFPVEFWHNDLFWLDAPISVPVPVSAPAQQQKSAFVPYLSRPNFRIEQKNKLAAPAA 60

Query: 61  SENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPS 120
           S +++KRVI+YWRK+W EKK+ A +GDLEREK H+HM+NER RRE+ ++SY  +HS+LP 
Sbjct: 61  SNSVNKRVIEYWRKQWHEKKEAAALGDLEREKCHRHMMNERTRREREKQSYLGVHSLLPK 120

Query: 121 KTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPS 180
           KTKNDKNSIVQ AARTI+EL+ASE MLK+RN ELEMA++AK R+  KGT PIR+   NPS
Sbjct: 121 KTKNDKNSIVQAAARTIQELRASEEMLKRRNSELEMAIAAKNRENAKGTKPIRLEWPNPS 180

Query: 181 SGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAI-ESHMRAAEVERALQMTLSEAE 240
           +GI+SML VLN+LKT  +N KAIHA F +S FS  +AI ++HM  AEVER LQ T+ EA+
Sbjct: 181 AGIDSMLAVLNVLKTGRINPKAIHANFFNSLFSAQLAIDDTHMGGAEVERVLQATVREAD 240

Query: 241 RKFQRQC 243
            +F+RQC
Sbjct: 241 GRFRRQC 247

[Close]

BLAST of CmaCh08G011060 vs. NCBI nr
Match: XP_023000539.1 (transcription factor bHLH92-like [Cucurbita maxima])

HSP 1 Score: 494.2 bits (1271), Expect = 6.8e-136
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENI 60
           MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENI
Sbjct: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENI 60

Query: 61  HKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKN 120
           HKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKN
Sbjct: 61  HKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKN 120

Query: 121 DKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGIN 180
           DKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGIN
Sbjct: 121 DKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGIN 180

Query: 181 SMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQR 240
           SMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQR
Sbjct: 181 SMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERKFQR 240

Query: 241 QCEEGSHDVKDGSTI 256
           QCEEGSHDVKDGSTI
Sbjct: 241 QCEEGSHDVKDGSTI 255

[Close]

BLAST of CmaCh08G011060 vs. NCBI nr
Match: XP_022930317.1 (transcription factor bHLH92-like [Cucurbita moschata])

HSP 1 Score: 435.3 bits (1118), Expect = 3.7e-118
Identity = 227/246 (92.28%), Postives = 235/246 (95.53%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIA-----AT 60
           MDDGFPVEFWHTDL+WLD PI VSDPAPGQISAFVPYLPQP IGS QKNNPI      AT
Sbjct: 1   MDDGFPVEFWHTDLHWLDPPIPVSDPAPGQISAFVPYLPQPTIGSRQKNNPITATTIIAT 60

Query: 61  YSENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLP 120
           YSEN+HKRVI+YWRK+WQEKKKPAEMGDLERE+SH+HMLNERMRREKHRRSYSELHSMLP
Sbjct: 61  YSENVHKRVIEYWRKQWQEKKKPAEMGDLERERSHRHMLNERMRREKHRRSYSELHSMLP 120

Query: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180
           SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP
Sbjct: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180

Query: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAE 240
           SSGINSMLGVLNLLKTVGVNAKAIHATFLDS+FSTHIAI+SHMRAAEVERALQMTLSEAE
Sbjct: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAIDSHMRAAEVERALQMTLSEAE 240

Query: 241 RKFQRQ 242
           RK QRQ
Sbjct: 241 RKLQRQ 246

[Close]

BLAST of CmaCh08G011060 vs. NCBI nr
Match: KAG7026190.1 (Transcription factor bHLH92, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434.5 bits (1116), Expect = 6.4e-118
Identity = 226/246 (91.87%), Postives = 234/246 (95.12%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNP-----IAAT 60
           MDDGFPVEFWHTDLYWLD PI V DPAPGQISAFVPYLPQP IGS QKNNP     I AT
Sbjct: 1   MDDGFPVEFWHTDLYWLDPPIPVPDPAPGQISAFVPYLPQPTIGSRQKNNPITATTITAT 60

Query: 61  YSENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLP 120
           YSEN+HKRVI+YWRK+WQEKKKPAEMGDLERE+SH+HMLNERMRREKHRRSYSELHSMLP
Sbjct: 61  YSENVHKRVIEYWRKQWQEKKKPAEMGDLERERSHRHMLNERMRREKHRRSYSELHSMLP 120

Query: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180
           SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP
Sbjct: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180

Query: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAE 240
           SSGINSMLGVLNLLKTVGVNAKAIHATFLDS+FSTHIAI+SHMRAAEVER LQMT+SEAE
Sbjct: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAIDSHMRAAEVERELQMTVSEAE 240

Query: 241 RKFQRQ 242
           RKFQRQ
Sbjct: 241 RKFQRQ 246

[Close]

BLAST of CmaCh08G011060 vs. NCBI nr
Match: KAG6593858.1 (Transcription factor basic helix-loop-helix 92, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.1 bits (1115), Expect = 8.3e-118
Identity = 225/246 (91.46%), Postives = 234/246 (95.12%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNP-----IAAT 60
           MDDGFPVEFWHTDLYWLD PI V DPAPGQISAF+PYLPQP IGS QKNNP     I AT
Sbjct: 1   MDDGFPVEFWHTDLYWLDPPIPVPDPAPGQISAFIPYLPQPTIGSRQKNNPITATTITAT 60

Query: 61  YSENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLP 120
           YSEN+HKRVI+YWRK+WQEKKKPAEMGDLERE+SH+HMLNERMRREKHRRSYSELHSMLP
Sbjct: 61  YSENVHKRVIEYWRKQWQEKKKPAEMGDLERERSHRHMLNERMRREKHRRSYSELHSMLP 120

Query: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180
           SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP
Sbjct: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180

Query: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAE 240
           SSGINSMLGVLNLLKTVGVNAKAIHATFLDS+FSTHIAI+SHMRAAEVER LQMT+SEAE
Sbjct: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAIDSHMRAAEVERELQMTVSEAE 240

Query: 241 RKFQRQ 242
           RKFQRQ
Sbjct: 241 RKFQRQ 246

[Close]

BLAST of CmaCh08G011060 vs. NCBI nr
Match: XP_023513950.1 (transcription factor bHLH92-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.9e-107
Identity = 205/227 (90.31%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNP-----IAAT 60
           MDDGFPVEFWHTDLYWLD PI VSDPAPGQISAFVPYLPQPAIGS QKNNP     I AT
Sbjct: 1   MDDGFPVEFWHTDLYWLDAPIPVSDPAPGQISAFVPYLPQPAIGSRQKNNPITATTITAT 60

Query: 61  YSENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLP 120
           YSEN+HKRVI+YWRK+WQEKKKPAEMGDLERE+SH+HMLNERMRREKHR+SYSELHSMLP
Sbjct: 61  YSENVHKRVIEYWRKRWQEKKKPAEMGDLERERSHRHMLNERMRREKHRQSYSELHSMLP 120

Query: 121 SKTKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180
            K KNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP
Sbjct: 121 IKVKNDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANP 180

Query: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAE 223
           SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAI+SH+R+ +
Sbjct: 181 SSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIDSHVRSPD 227

[Close]

BLAST of CmaCh08G011060 vs. TAIR 10
Match: AT5G43650.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 87/229 (37.99%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 9   FWHTDLYWLDTPISVSDPAPGQISAFVPYLPQPAIGSGQKNNPIAATYSENIHKRVIKYW 68
           FW   +  +    SVS P     SAF  Y+    +   +  +P  ++   N+ KR++   
Sbjct: 16  FWDLIVADISGDRSVSVPIR---SAFRSYMKDTEL---RMMSPKISSSKVNVKKRMVNLL 75

Query: 69  RKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSMLPSKTKNDKNSIVQM 128
           RK W+EKK        E+E+S +HML ER RREK ++SY  LHS+LP  TKNDKNSIV+ 
Sbjct: 76  RKNWEEKKNTVAP---EKERSRRHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEK 135

Query: 129 AARTIEELKASEGMLKKRNIELEMALSAKKRKQEKGTTPIRVAVANPSSGINSMLGVLNL 188
           A   I +L+  +  L +R I++    SAK    E   T +RV +  P SG++SML  L+ 
Sbjct: 136 AVDEIAKLQRLKKELVRR-IKVIEEKSAKDGHDEMSETKVRVNLKEPLSGLDSMLEALHY 195

Query: 189 LKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEVERALQMTLSEAERK 238
           LK++G   K +HA F   +FS  + IE+ +R  EVE+ ++  L E E K
Sbjct: 196 LKSMGTKLKTVHANFSPQEFSATMTIETQIRGEEVEKRVERRLQETEWK 234

[Close]

BLAST of CmaCh08G011060 vs. TAIR 10
Match: AT5G56960.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.9e-05
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 91  QHMLNERMRREKHRRSYSELHSMLPSKTKNDKNSIVQMAARTIEELKASEGMLKKRNIEL 150
           QHM++ER RREK   S+  L S+LP  TK DK S++ +A   +  L+     L +RN E+
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREV 348

Query: 151 EMALSAKK 159
           E  L+ ++
Sbjct: 349 EAKLAGER 356

The following BLAST results are available for this feature:

BLAST of CmaCh08G011060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIX5	3.5e-26	37.99	Transcription factor bHLH92 OS=Arabidopsis thaliana OX=3702 GN=BHLH92 PE=1 SV=1	[more]
Q75KV9	2.7e-18	36.81	Transcription factor BHLH148 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH148...	[more]
Q9LTS4	8.3e-04	39.71	Putative transcription factor bHLH041 OS=Arabidopsis thaliana OX=3702 GN=BHLH41 ...	[more]

BLAST of CmaCh08G011060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KK97	3.3e-136	100.00	transcription factor bHLH92-like OS=Cucurbita maxima OX=3661 GN=LOC111494781 PE=...	[more]
A0A6J1EQ49	1.8e-118	92.28	transcription factor bHLH92-like OS=Cucurbita moschata OX=3662 GN=LOC111436803 P...	[more]
A0A5A7UQX2	2.5e-75	62.17	Transcription factor bHLH92 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CPU0	2.5e-75	62.17	transcription factor bHLH92 OS=Cucumis melo OX=3656 GN=LOC103502857 PE=4 SV=1	[more]
A0A6J1H311	8.8e-73	61.94	transcription factor bHLH92 OS=Cucurbita moschata OX=3662 GN=LOC111459950 PE=4 S...	[more]

BLAST of CmaCh08G011060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000539.1	6.8e-136	100.00	transcription factor bHLH92-like [Cucurbita maxima]	[more]
XP_022930317.1	3.7e-118	92.28	transcription factor bHLH92-like [Cucurbita moschata]	[more]
KAG7026190.1	6.4e-118	91.87	Transcription factor bHLH92, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6593858.1	8.3e-118	91.46	Transcription factor basic helix-loop-helix 92, partial [Cucurbita argyrosperma ...	[more]
XP_023513950.1	3.9e-107	90.31	transcription factor bHLH92-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh08G011060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43650.1	2.5e-27	37.99	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G56960.1	5.9e-05	39.71	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 93..142 e-value: 8.1E-4 score: 28.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 91..136 e-value: 3.2E-7 score: 30.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 87..136 score: 11.731307
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 82..149 e-value: 5.5E-8 score: 34.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 86..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..109
None	No IPR available	PANTHER	PTHR46665:SF6	TRANSCRIPTION FACTOR BHLH92	coord: 1..243
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 92..137 e-value: 2.43466E-8 score: 47.176
IPR044658	Transcription factor bHLH92/bHLH041-like	PANTHER	PTHR46665	TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED	coord: 1..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G011060.1	CmaCh08G011060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity