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CmaCh08G009980 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAACCGTAACGAGGGAAGCTAATTCAGACAAGAAATTCACAGGAACTTTTTTTGCTTTTGCTCATTCCGTACTTACTTCCGCAGTCGACGAACCAGCGAGTGGTGAAGGTTCATCAAAGGAAGATTTCAGTGACATAATCGGAAGAAGAAATCACAGAGATGCGTGGTTACGGTTTGGCTTTATCTGGTACTGATTCACGTTGCTTTGTACCGGCGATGCCTCCGATTTTCTCTCCGAGAAGAGCCTCTCCGTCGGTAGGAAATTCGCAGGTTCTGTTTCCTAAATCGACACGGAATCCTTCTCTTTGCGTCAGAGCGAAGGCAGCCGTCGTCAACGAGGCGCTTGTCTCCGACGCTGTTGAGATTAGCTTCTACGATCTTTTAGGAATACCGGAGTCGGGGTCTATGGCGGAGATTAAGCAGGCGTACAAGCAGATGGCTCTGAAATATCATCCGGACGTCTCGCCGCCGGATAGGATCGAGGAGTATACCAGAAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTGTCTGATCCTCGTATGAGAGCTTTGTATGATAGAGACATGTTGGGAGGCCTTCACCTTGCTTTCTCTGCTCGAAGACGTGGCAACAACGAGGTACATTTCTTGCCGATTTTTGAGGTCAATTTGGTTTCTGAATCAATTAGGAATCGGATGCCTTCTCTACCTTATTTCATGGCAAATTATTTCGTTTTAGTGAGTTGATTTTTGACCTGATTAGCTTCTACGATTTTTGACCTGTTTTTGTATAGGTAATTAGATGAAGAACATCATCTGGTATTTCTTTAAGGAAAAAAAAACTATTAGTTGAAACATAATTTACAAACTACAGAGGTATATTGACAATATACAAATGTTCTTTGAGGAATTTATTTTAGCAATTGATTAACCATAATTTTAGGATCTTTTGATTCTATCCTCTGTCTCACTTGCTAGTTGCTTAAGCTTGCCGCATGCTTCTATTATACTTTTCAAAATGCCAAAGTCACACAAGACGTTTTGGCGTTATTATTTTTTACTTCACCATCGTTTCTTAAAATAATCTGTTCTTAATTCAAATGACCTAAGTGCTTCAAAACAGGGATAATCAAGACAAAATTATGATTCCTGGATATAATCATATGGCAGATATCAATTCTTGTAGTTTCTGTATCAGAATTTCCTAAATTAAATATGCACTTGTCTGATTCTTTCCTTGAATTACTCAGGAAATGGAAGTGAAAAGTGGGTGGAAGAGCCTTTGGCAGGATCAGCTATCAGGCTTGAGGAGAAGAAGCATGAACAAAGATTCAGGAGCAAGCATGTCGTGGGGAGCACGAATGCGCAGACAAAGGGACGAGCTTAACGACGACGAAGACGAGGTGTAATTTGGTTTCTCCCTTGCTCTAAAACTTTCAACCTTCCTGCACATAGCTGATACAATATACAATAGCTGGATTCAAGAACTCAATTAGCACTCAAGAACTCAATTAGCACTCTTTATACACAGCCGACTGAGTACTAGAACTTCTGCTTCCACTGTGAAACCCAAATTGTTTAGAGCCCAAAAATTGGGAAGTTTTTCATAGGGAATGTAAATCACTAGCAAACTAGTATTCAATGTATATATATGGAAATTAAAATTTCTCGAGTACTTTGAG TGAAACCGTAACGAGGGAAGCTAATTCAGACAAGAAATTCACAGGAACTTTTTTTGCTTTTGCTCATTCCGTACTTACTTCCGCAGTCGACGAACCAGCGAGTGGTGAAGGTTCATCAAAGGAAGATTTCAGTGACATAATCGGAAGAAGAAATCACAGAGATGCGTGGTTACGGTTTGGCTTTATCTGGTACTGATTCACGTTGCTTTGTACCGGCGATGCCTCCGATTTTCTCTCCGAGAAGAGCCTCTCCGTCGGTAGGAAATTCGCAGGTTCTGTTTCCTAAATCGACACGGAATCCTTCTCTTTGCGTCAGAGCGAAGGCAGCCGTCGTCAACGAGGCGCTTGTCTCCGACGCTGTTGAGATTAGCTTCTACGATCTTTTAGGAATACCGGAGTCGGGGTCTATGGCGGAGATTAAGCAGGCGTACAAGCAGATGGCTCTGAAATATCATCCGGACGTCTCGCCGCCGGATAGGATCGAGGAGTATACCAGAAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTGTCTGATCCTCGTATGAGAGCTTTGTATGATAGAGACATGTTGGGAGGCCTTCACCTTGCTTTCTCTGCTCGAAGACGTGGCAACAACGAGGAAATGGAAGTGAAAAGTGGGTGGAAGAGCCTTTGGCAGGATCAGCTATCAGGCTTGAGGAGAAGAAGCATGAACAAAGATTCAGGAGCAAGCATGTCGTGGGGAGCACGAATGCGCAGACAAAGGGACGAGCTTAACGACGACGAAGACGAGGTGTAATTTGGTTTCTCCCTTGCTCTAAAACTTTCAACCTTCCTGCACATAGCTGATACAATATACAATAGCTGGATTCAAGAACTCAATTAGCACTCAAGAACTCAATTAGCACTCTTTATACACAGCCGACTGAGTACTAGAACTTCTGCTTCCACTGTGAAACCCAAATTGTTTAGAGCCCAAAAATTGGGAAGTTTTTCATAGGGAATGTAAATCACTAGCAAACTAGTATTCAATGTATATATATGGAAATTAAAATTTCTCGAGTACTTTGAG ATGCGTGGTTACGGTTTGGCTTTATCTGGTACTGATTCACGTTGCTTTGTACCGGCGATGCCTCCGATTTTCTCTCCGAGAAGAGCCTCTCCGTCGGTAGGAAATTCGCAGGTTCTGTTTCCTAAATCGACACGGAATCCTTCTCTTTGCGTCAGAGCGAAGGCAGCCGTCGTCAACGAGGCGCTTGTCTCCGACGCTGTTGAGATTAGCTTCTACGATCTTTTAGGAATACCGGAGTCGGGGTCTATGGCGGAGATTAAGCAGGCGTACAAGCAGATGGCTCTGAAATATCATCCGGACGTCTCGCCGCCGGATAGGATCGAGGAGTATACCAGAAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTGTCTGATCCTCGTATGAGAGCTTTGTATGATAGAGACATGTTGGGAGGCCTTCACCTTGCTTTCTCTGCTCGAAGACGTGGCAACAACGAGGAAATGGAAGTGAAAAGTGGGTGGAAGAGCCTTTGGCAGGATCAGCTATCAGGCTTGAGGAGAAGAAGCATGAACAAAGATTCAGGAGCAAGCATGTCGTGGGGAGCACGAATGCGCAGACAAAGGGACGAGCTTAACGACGACGAAGACGAGGTGTAA MRGYGLALSGTDSRCFVPAMPPIFSPRRASPSVGNSQVLFPKSTRNPSLCVRAKAAVVNEALVSDAVEISFYDLLGIPESGSMAEIKQAYKQMALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPRMRALYDRDMLGGLHLAFSARRRGNNEEMEVKSGWKSLWQDQLSGLRRRSMNKDSGASMSWGARMRRQRDELNDDEDEV Homology
BLAST of CmaCh08G009980 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2) HSP 1 Score: 176.8 bits (447), Expect = 2.5e-43 Identity = 100/194 (51.55%), Postives = 130/194 (67.01%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy Swiss-Prot
Match: Q9WZV3 (Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=dnaJ PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.8e-12 Identity = 31/65 (47.69%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy Swiss-Prot
Match: A5IIT4 (Chaperone protein DnaJ OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=dnaJ PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.8e-12 Identity = 31/65 (47.69%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy Swiss-Prot
Match: B1LCI2 (Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) OX=126740 GN=dnaJ PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.8e-12 Identity = 31/65 (47.69%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy Swiss-Prot
Match: Q2KDW7 (Chaperone protein DnaJ OS=Rhizobium etli (strain CFN 42 / ATCC 51251) OX=347834 GN=dnaJ PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11 Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy TrEMBL
Match: A0A6J1KFW2 (chaperone protein dnaJ 20, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494708 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.0e-111 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy TrEMBL
Match: A0A6J1HHM6 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464407 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105 Identity = 195/206 (94.66%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy TrEMBL
Match: A0A6J1H3S2 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460232 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.6e-88 Identity = 170/205 (82.93%), Postives = 183/205 (89.27%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy TrEMBL
Match: A0A6J1KVG4 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499073 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86 Identity = 168/205 (81.95%), Postives = 180/205 (87.80%), Query Frame = 0
BLAST of CmaCh08G009980 vs. ExPASy TrEMBL
Match: A0A6J1CE65 (chaperone protein dnaJ 20, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111009883 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 5.4e-81 Identity = 159/198 (80.30%), Postives = 175/198 (88.38%), Query Frame = 0
BLAST of CmaCh08G009980 vs. NCBI nr
Match: XP_023000441.1 (chaperone protein dnaJ 20, chloroplastic [Cucurbita maxima]) HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CmaCh08G009980 vs. NCBI nr
Match: XP_022964372.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 391.3 bits (1004), Expect = 5.0e-105 Identity = 195/206 (94.66%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of CmaCh08G009980 vs. NCBI nr
Match: KAG6593757.1 (Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104 Identity = 196/206 (95.15%), Postives = 200/206 (97.09%), Query Frame = 0
BLAST of CmaCh08G009980 vs. NCBI nr
Match: KAG7026089.1 (Chaperone protein dnaJ 20, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387.5 bits (994), Expect = 7.2e-104 Identity = 195/206 (94.66%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of CmaCh08G009980 vs. NCBI nr
Match: XP_023513423.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 384.0 bits (985), Expect = 8.0e-103 Identity = 193/206 (93.69%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of CmaCh08G009980 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 ) HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44 Identity = 100/194 (51.55%), Postives = 130/194 (67.01%), Query Frame = 0
BLAST of CmaCh08G009980 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 ) HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31 Identity = 70/150 (46.67%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of CmaCh08G009980 vs. TAIR 10
Match: AT3G62600.1 (DNAJ heat shock family protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11 Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of CmaCh08G009980 vs. TAIR 10
Match: AT1G59980.1 (ARG1-like 2 ) HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11 Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of CmaCh08G009980 vs. TAIR 10
Match: AT5G01390.1 (DNAJ heat shock family protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10 Identity = 30/76 (39.47%), Postives = 53/76 (69.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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