CmaCh08G008470 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G008470
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr08: 5135647 .. 5136217 (-)
RNA-Seq ExpressionCmaCh08G008470
SyntenyCmaCh08G008470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTTTTGCAAGTCTTGCACGAAGTTTCGACGAAGTTTCTCTATCGAATTAAACAGCGAAGGGACAGTTACAGATCAGTGTAGTGCTCATCCAGCGCAGAGCTTCAATGAATCGCCCATCCATGGCGATCTTCTGCCGTGTCTCTTCCTCGTTTGAGCTTCTTTAGAGCTTCGTTTTCGAGATCAATGGATTCCTCATCTCTCAGTTACAGACACAGAACAGCCACATCGCCAATTTGGCCGTCATTGCCTTCTGCGGATGCGCGGATTCAGTTTCGAGCAACACTGGTACCGTTTCGCTTCTCTGTAGCTTCCTAAATTTGGTATGCGTTCGCTCCTTTTTTTCCTACTTCAAAATCCCCCAATTTCACCGCTCTTCCAGGAATATCGTAACTGTCTCCACCGTCTCCACCGTCTCCACCAGAATTAGCATCGATAATTTGGCTGTTTTTCTTTATTATTCAAGTTCATCGCGTGTTTTCGATTTCTGGACCTTTTTTTTTCGAGTCTGAATGATTCTTGTTTTCGTCTACGGCGAGATGGCTCAGCAGGTATAAGCTTCGGTTGA

mRNA sequence

ATGTATTTTTTGCAAGTCTTGCACGAAGTTTCGACGAACGAAGGGACAGTTACAGATCAGTGTAGTGCTCATCCAGCGCAGAGCTTCAATGAATCGCCCATCCATGGCGATCTTCTGCCGTGTCTCTTCCTCAGCTTCGTTTTCGAGATCAATGGATTCCTCATCTCTCAGTTACAGACACAGAACAGCCACATCGCCAATTTGGCCGTCATTGCCTTCTGCGGATGCGCGGATTCAGTTTCGAGCAACACTGGTACCGTTTCGCTTCTCTGTAGCTTCCTAAATTTGTTCATCGCGTGTTTTCGATTTCTGGACCTTTTTTTTTCGAGTCTGAATGATTCTTGTTTTCGTCTACGGCGAGATGGCTCAGCAGGTATAAGCTTCGGTTGA

Coding sequence (CDS)

ATGTATTTTTTGCAAGTCTTGCACGAAGTTTCGACGAACGAAGGGACAGTTACAGATCAGTGTAGTGCTCATCCAGCGCAGAGCTTCAATGAATCGCCCATCCATGGCGATCTTCTGCCGTGTCTCTTCCTCAGCTTCGTTTTCGAGATCAATGGATTCCTCATCTCTCAGTTACAGACACAGAACAGCCACATCGCCAATTTGGCCGTCATTGCCTTCTGCGGATGCGCGGATTCAGTTTCGAGCAACACTGGTACCGTTTCGCTTCTCTGTAGCTTCCTAAATTTGTTCATCGCGTGTTTTCGATTTCTGGACCTTTTTTTTTCGAGTCTGAATGATTCTTGTTTTCGTCTACGGCGAGATGGCTCAGCAGGTATAAGCTTCGGTTGA

Protein sequence

MYFLQVLHEVSTNEGTVTDQCSAHPAQSFNESPIHGDLLPCLFLSFVFEINGFLISQLQTQNSHIANLAVIAFCGCADSVSSNTGTVSLLCSFLNLFIACFRFLDLFFSSLNDSCFRLRRDGSAGISFG
Homology
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BLAST of CmaCh08G008470 vs. NCBI nr
Match: KAG6593597.1 (Metal tolerance protein C4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-16
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 44  LSFVFEINGFLISQLQTQNSHIANLAVIAFCGCADSV-SSNTGTVSLLCSFLNL 97
           LSFVFEINGFLISQLQT+NSHIANLAVIAFCGCADSV SS+TGTVSLLCSFLNL
Sbjct: 447 LSFVFEINGFLISQLQTRNSHIANLAVIAFCGCADSVSSSSTGTVSLLCSFLNL 500

The following BLAST results are available for this feature:
BLAST of CmaCh08G008470 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh08G008470 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh08G008470 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593597.11.6e-1694.44Metal tolerance protein C4, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmaCh08G008470 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G008470.1CmaCh08G008470.1mRNA