CmaCh08G008290 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCTTTTCTGTGGGTATTCATGTTCTTCTATATATCCGCCATATCCAAATCCTTCACATCCTCACACCATCTTCCTGTGATTCTACCCTTTACAAATGCTTCCCAAATTGGGGAGACCCTTTAGAATGAAGGAGAGAAATGGTAAGCTAAGAGAAACTGACAATAATCCCAGAAATTCGAAGGCTGTTGGGTTAGGAATCCTTGTTCATCGCTCACCACAACCAAATCTCCTGCTTAAACACTCCACAAAACTTGCTTCTTCCACTCAAATCATTTCCAACAATTCATGTTTTCTCAAAACATGTCTTCTTTGCCACAAGAATCTGGACCCCCACGAAGATATTTACATGTATAGGTACTCTACTTTTGATCTATATACCTTAGTTTTTGCTTATTTCTTTAGATTTTTCCAAGGAAATATGTCATTTCTTTATACTGGTTCAGTTTTTTTATGGTATTTGGTGTTGTTCATAGGGGCGATCAAGGTTATTGCAGCATAAAGTGCAGAAACCAGCAGATTGAAAATGATGAAAACAGAGAATTAGAAGATTCCACCAGGAAAATACTTGAATCTTTCAGACAATGTCATAAAAATGAACCAATTGAAACTCACCTTCTCTTAGAGGATCTCCAGCACCAACATAACCGCCTTCCTGTTTCATAGTCTTATTGTCTTTTCCACCTGCTTCATGTTTCAGAAAATGTAAAGTAAAATGGTCATTAGCATTTAGCAATAAAAGAAAACAAGAGAAGTTGGATCTTTGTTGTCTTTGTATTCATTGGCAGATTGATGTTGTATCAGAAAAGGAAAAGGGTGTAAGATTTGAAGCTCTTTTAGATAATTTAATTTTTGACTGTGATGAACTGATGATTATGTAAGGCTGAAAAAACATATGAAAGAGATAAGCTATGAAGGGTTGCTACAATAGCTGAGCTAAATGAAGTCAAATGTTTATGAATGCATGAACTGGAGAAGTTGATCTTAACATATGCTTAAAACTTATTGCATGG TTTTCTTTTCTGTGGGTATTCATGTTCTTCTATATATCCGCCATATCCAAATCCTTCACATCCTCACACCATCTTCCTGTGATTCTACCCTTTACAAATGCTTCCCAAATTGGGGAGACCCTTTAGAATGAAGGAGAGAAATGGTAAGCTAAGAGAAACTGACAATAATCCCAGAAATTCGAAGGCTGTTGGGTTAGGAATCCTTGTTCATCGCTCACCACAACCAAATCTCCTGCTTAAACACTCCACAAAACTTGCTTCTTCCACTCAAATCATTTCCAACAATTCATGTTTTCTCAAAACATGTCTTCTTTGCCACAAGAATCTGGACCCCCACGAAGATATTTACATGTATAGGGGCGATCAAGGTTATTGCAGCATAAAGTGCAGAAACCAGCAGATTGAAAATGATGAAAACAGAGAATTAGAAGATTCCACCAGGAAAATACTTGAATCTTTCAGACAATGTCATAAAAATGAACCAATTGAAACTCACCTTCTCTTAGAGGATCTCCAGCACCAACATAACCGCCTTCCTGTTTCATAGTCTTATTGTCTTTTCCACCTGCTTCATGTTTCAGAAAATGTAAAGTAAAATGGTCATTAGCATTTAGCAATAAAAGAAAACAAGAGAAGTTGGATCTTTGTTGTCTTTGTATTCATTGGCAGATTGATGTTGTATCAGAAAAGGAAAAGGGTGTAAGATTTGAAGCTCTTTTAGATAATTTAATTTTTGACTGTGATGAACTGATGATTATGTAAGGCTGAAAAAACATATGAAAGAGATAAGCTATGAAGGGTTGCTACAATAGCTGAGCTAAATGAAGTCAAATGTTTATGAATGCATGAACTGGAGAAGTTGATCTTAACATATGCTTAAAACTTATTGCATGG ATGCTTCCCAAATTGGGGAGACCCTTTAGAATGAAGGAGAGAAATGGTAAGCTAAGAGAAACTGACAATAATCCCAGAAATTCGAAGGCTGTTGGGTTAGGAATCCTTGTTCATCGCTCACCACAACCAAATCTCCTGCTTAAACACTCCACAAAACTTGCTTCTTCCACTCAAATCATTTCCAACAATTCATGTTTTCTCAAAACATGTCTTCTTTGCCACAAGAATCTGGACCCCCACGAAGATATTTACATGTATAGGGGCGATCAAGGTTATTGCAGCATAAAGTGCAGAAACCAGCAGATTGAAAATGATGAAAACAGAGAATTAGAAGATTCCACCAGGAAAATACTTGAATCTTTCAGACAATGTCATAAAAATGAACCAATTGAAACTCACCTTCTCTTAGAGGATCTCCAGCACCAACATAACCGCCTTCCTGTTTCATAG MLPKLGRPFRMKERNGKLRETDNNPRNSKAVGLGILVHRSPQPNLLLKHSTKLASSTQIISNNSCFLKTCLLCHKNLDPHEDIYMYRGDQGYCSIKCRNQQIENDENRELEDSTRKILESFRQCHKNEPIETHLLLEDLQHQHNRLPVS Homology
BLAST of CmaCh08G008290 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 8.6e-09 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08 Identity = 32/103 (31.07%), Postives = 53/103 (51.46%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy TrEMBL
Match: A0A6J1HGR2 (uncharacterized protein LOC111464182 OS=Cucurbita moschata OX=3662 GN=LOC111464182 PE=3 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy TrEMBL
Match: A0A5D3C0J4 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001630 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43 Identity = 101/151 (66.89%), Postives = 116/151 (76.82%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy TrEMBL
Match: A0A1S3CGJ4 (uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43 Identity = 101/151 (66.89%), Postives = 116/151 (76.82%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy TrEMBL
Match: A0A6J1GPB9 (uncharacterized protein LOC111456219 OS=Cucurbita moschata OX=3662 GN=LOC111456219 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of CmaCh08G008290 vs. ExPASy TrEMBL
Match: A0A6J1JTJ9 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.7e-42 Identity = 87/124 (70.16%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of CmaCh08G008290 vs. NCBI nr
Match: XP_022964037.1 (uncharacterized protein LOC111464182 [Cucurbita moschata] >XP_023515161.1 uncharacterized protein LOC111779275 [Cucurbita pepo subsp. pepo] >KAG6593580.1 FCS-Like Zinc finger 18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025925.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301.6 bits (771), Expect = 3.8e-78 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CmaCh08G008290 vs. NCBI nr
Match: XP_038896964.1 (FCS-Like Zinc finger 17-like isoform X1 [Benincasa hispida]) HSP 1 Score: 187.6 bits (475), Expect = 7.9e-44 Identity = 101/149 (67.79%), Postives = 112/149 (75.17%), Query Frame = 0
BLAST of CmaCh08G008290 vs. NCBI nr
Match: XP_008462244.1 (PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo] >KAA0059360.1 DUF581 family protein [Cucumis melo var. makuwa] >TYK03966.1 DUF581 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42 Identity = 101/151 (66.89%), Postives = 116/151 (76.82%), Query Frame = 0
BLAST of CmaCh08G008290 vs. NCBI nr
Match: XP_022953803.1 (uncharacterized protein LOC111456219 [Cucurbita moschata]) HSP 1 Score: 182.2 bits (461), Expect = 3.3e-42 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of CmaCh08G008290 vs. NCBI nr
Match: XP_022992436.1 (protein MARD1-like [Cucurbita maxima]) HSP 1 Score: 181.4 bits (459), Expect = 5.7e-42 Identity = 87/124 (70.16%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of CmaCh08G008290 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 84.3 bits (207), Expect = 8.8e-17 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of CmaCh08G008290 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 84.3 bits (207), Expect = 8.8e-17 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of CmaCh08G008290 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of CmaCh08G008290 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CmaCh08G008290 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09 Identity = 32/103 (31.07%), Postives = 53/103 (51.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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