CmaCh08G008170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G008170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Acyl carrier protein
Location	Cma_Chr08: 4958513 .. 4960180 (+)
RNA-Seq Expression	CmaCh08G008170
Synteny	CmaCh08G008170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCCTTGCTTCGTCTCCTCTTCTCGCGACGCTTGCCTCGACGACATCGACAAGTAGCTGCACTGCTTGGCATTTGCGCAATAGTCTGTTTGCCAGAGTGAGTCTTCTCTGGTCAAGTTATTACAAGTTGTTTTTCTTTTAAGGAATTTTCAGTTTCATTCCAAAATTGGTCATTTAGGTAAGTTTGTTTTGTGAGCAGAGGGTGTTTCCCAGCATCCAAATGGCAAAGCCTGCGAGAGGAGGACTATACCAACTTCCAACCTACTTCAAATCAAACATTTCCTGCTCCCTTGTACCTTCCTTACACTCTTTACTTTATTTTCCTATGCTAAATTATATCCAGTCGTTCCAAAAAAAAATTCTAAAACAATAGATTCAATGCAAAATATGTTAAGAACTACAACTCTAAACCTAAGCAATGACGTGATATTGTCCACTTTAGGTATAAGCTTTGTGGCTTTACTTTTGGTTTCCACAAAATACCTCAACCCTTTAATTAGCCAGTGTGGGATTCCTCTCTCAGTAATCGTCAACAATCCTCCCTCGAACAAAATACACCATAGAGCCTCCCTGAGACCTATGGAACCTTCAAATAGTCTCTCCTTAATCGAGGCTTGACTCCTACGGAACTCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTCACCTTTTGACTATACCTTAAAGGCTCACAACTTCTTTGTTGACATTTAAGAATTCTATTGACATATTTAAATTATGGACACGACTCTTATACCATGTTAGAAAGCACAAACCACCACATTAGTATGATATTGTCCACTTTCAACATAAAATTCGTCCCTTTGCTTTTGGTTTCCCAAAAGACCTCGTACCAATGAAATATTTCTTACTTATAAACTCATGATCAACCTCTTAATTAGTCGATGTAAAACTCCTCTTCCAACAATCCTCGACAAAATAGACCTTTTATTTTCAAAATTATCACTTTCTAGGTTGTTGTACAGAAATGCATTTCAAATATATCTTATAATTATTAAAAAAGATATCAGCAAATAAGCTTTTTCTATAAAAAATAAAAAAAGACCACACGAAAAAGTAACCAAAACTTCCTTATTGATGAGATATAAAATTGTGTATTAACTGTTACCATAATTATTGGACACATAATAGAAGAAAAATAATTCAATTTCATAAGCAAAAAAAGGAAGATAAATTTGTTTGAAAATTTTTAAACAAGAAAAAACAAGTGGAAGACAGCTAAAAGAAACGGTTGAATTTAAGTAGTGAAAATTGAGATGGGTGTGTAAAAATGGGCAGGCACAACCAGAGACAATGCAAGTTGTTCAAGAAATAATCGCCAAGCAACTCTCTCTGGAACTAAGCGCAGTGATCCCTCAAACAAAATTTTCTGAATTGGGAGCTGATTCTCTCGACACCGTGAGTCAACTCAAAATTTTAAACCAACAGCTAACAATCAAAAGCTAAGAAAAACTATAATTCATAACTCACATTAAAGGAATACTTACAGGTTGAGATCATGATGGGTTTGGAAGAGAAGTTCGGAGTGTCCATTGGAGAAGGCGGAGCCGAGGGCATCTCGACGGTTCAAGACGCTGCCGATCTGATTGAGAAAGTCAAGACATCCTCTGCAAGTTAAACCAAGCTGCAACATATCCCA

mRNA sequence

ATGTCGTCCCTTGCTTCGTCTCCTCTTCTCGCGACGCTTGCCTCGACGACATCGACAAGTAGCTGCACTGCTTGGCATTTGCGCAATAGTCTGTTTGCCAGAGTAAGTTTGTTTTGTGAGCAGAGGGTGTTTCCCAGCATCCAAATGGCAAAGCCTGCGAGAGGAGGACTATACCAACTTCCAACCTACTTCAAATCAAACATTTCCTGCTCCCTTGCACAACCAGAGACAATGCAAGTTGTTCAAGAAATAATCGCCAAGCAACTCTCTCTGGAACTAAGCGCAGTGATCCCTCAAACAAAATTTTCTGAATTGGGAGCTGATTCTCTCGACACCGTTGAGATCATGATGGGTTTGGAAGAGAAGTTCGGAGTGTCCATTGGAGAAGGCGGAGCCGAGGGCATCTCGACGGTTCAAGACGCTGCCGATCTGATTGAGAAAGTCAAGACATCCTCTGCAAGTTAAACCAAGCTGCAACATATCCCA

Coding sequence (CDS)

ATGTCGTCCCTTGCTTCGTCTCCTCTTCTCGCGACGCTTGCCTCGACGACATCGACAAGTAGCTGCACTGCTTGGCATTTGCGCAATAGTCTGTTTGCCAGAGTAAGTTTGTTTTGTGAGCAGAGGGTGTTTCCCAGCATCCAAATGGCAAAGCCTGCGAGAGGAGGACTATACCAACTTCCAACCTACTTCAAATCAAACATTTCCTGCTCCCTTGCACAACCAGAGACAATGCAAGTTGTTCAAGAAATAATCGCCAAGCAACTCTCTCTGGAACTAAGCGCAGTGATCCCTCAAACAAAATTTTCTGAATTGGGAGCTGATTCTCTCGACACCGTTGAGATCATGATGGGTTTGGAAGAGAAGTTCGGAGTGTCCATTGGAGAAGGCGGAGCCGAGGGCATCTCGACGGTTCAAGACGCTGCCGATCTGATTGAGAAAGTCAAGACATCCTCTGCAAGTTAA

Protein sequence

MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQLPTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

Homology

[Close]

BLAST of CmaCh08G008170 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.0e-18
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 0


Query: 28  RNSLFARVSLFCEQRVFPSIQMAKPARGGLYQLPTYFKSNISCSLAQPETMQVVQEIIAK 87
           R S    VSL   ++ FPS++ +K +          F   +SC  A+PET+  V  I+ K
Sbjct: 24  RISSLRSVSLPVSRKSFPSLKSSKSS----------FALRVSCQ-AKPETVAKVCGIVKK 83

Query: 88  QLSL-ELSAVIPQTKFSELGADSLDTVEIMMGLEEKFGVSIGEGGAEGISTVQDAADLIE 147
           QL+L + S V   +KFS LGADSLDTVEI+MGLEE+FG+S+ E  A+ I TVQDAADLIE
Sbjct: 84  QLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIE 134

Query: 148 KV 149
           K+
Sbjct: 144 KL 134

[Close]

BLAST of CmaCh08G008170 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.0e-17
Identity = 48/82 (58.54%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 68  ISCSLAQPETMQVVQEIIAKQLSL-ELSAVIPQTKFSELGADSLDTVEIMMGLEEKFGVS 127
           + C  A+PET++ V  I+ KQL+L + SAV  ++KF+ LGADSLDTVEI+MGLEE+FG++
Sbjct: 49  VVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGIN 108

Query: 128 IGEGGAEGISTVQDAADLIEKV 149
           + E  A+ I+TVQDAADLIEK+
Sbjct: 109 VEEESAQSIATVQDAADLIEKL 130

[Close]

BLAST of CmaCh08G008170 vs. ExPASy Swiss-Prot
Match: P52413 (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-17
Identity = 60/115 (52.17%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 35  VSLFCEQRVFPSIQMAKPARGGLYQLPTYFKSNISCSLAQPETMQVVQEIIAKQLSL-EL 94
           VSL    ++FPS+   + +RG     P  F+    C  A+ ET+  V EI+ KQL+L E 
Sbjct: 35  VSLPISGKIFPSL---RSSRG-----PLSFR---VCCQAKQETVTRVCEIVKKQLALPED 94

Query: 95  SAVIPQTKFSELGADSLDTVEIMMGLEEKFGVSIGEGGAEGISTVQDAADLIEKV 149
           S V   +KFS LGADSLDTVEI+MGLEE+FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 95  SEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKL 138

[Close]

BLAST of CmaCh08G008170 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-17
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 0


Query: 28  RNSLFARVSLFCEQRVFPSIQMAKPARGGLYQLPTYFKSNISCSLAQPETMQVVQEIIAK 87
           R S    VSL   ++ FPS++ +K +            + +SC  A+PET+  V  I+ K
Sbjct: 24  RISSLRSVSLPVSRKSFPSLRSSKGS-----------FARVSCQ-AKPETVAKVCRIVKK 83

Query: 88  QLSL-ELSAVIPQTKFSELGADSLDTVEIMMGLEEKFGVSIGEGGAEGISTVQDAADLIE 147
           QL+L + S V   +KFS LGADSLDTVEI+MGLEE+FG+S+ E  A+ I TVQDAADLIE
Sbjct: 84  QLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIE 133

Query: 148 KV 149
           K+
Sbjct: 144 KL 133

[Close]

BLAST of CmaCh08G008170 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.4e-16
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 64  FKSNISCSLAQPETMQVVQEIIAKQLSL-ELSAVIPQTKFSELGADSLDTVEIMMGLEEK 123
           F   ++C  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+MGLEE+
Sbjct: 47  FSLRVNCQ-AKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEE 106

Query: 124 FGVSIGEGGAEGISTVQDAADLIEKV 149
           FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 107 FGISVEEESAQSIQTVQDAADLIEKL 131

[Close]

BLAST of CmaCh08G008170 vs. ExPASy TrEMBL
Match: A0A6J1KH46 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494313 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.5e-67
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR       RVFPSIQMAKPARGGLYQL
Sbjct: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR-------RVFPSIQMAKPARGGLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120

Query: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 147

[Close]

BLAST of CmaCh08G008170 vs. ExPASy TrEMBL
Match: A0A6J1KIN6 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494313 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 147/158 (93.04%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR       RVFPSIQMAKPARGGLYQL
Sbjct: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR-------RVFPSIQMAKPARGGLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDT----VEIM 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDT    VEIM
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTEYLQVEIM 120

Query: 121 MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 151

[Close]

BLAST of CmaCh08G008170 vs. ExPASy TrEMBL
Match: A0A6J1HII2 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 136/154 (88.31%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLL TLASTT TSSCTAW  RNSLFAR       RVFPSI+ AK AR GLYQL
Sbjct: 1   MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------RVFPSIRRAKAAR-GLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLE S VIPQTKFSELGADSLDTVEIMM LE
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTVEIMMALE 120

Query: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 146

[Close]

BLAST of CmaCh08G008170 vs. ExPASy TrEMBL
Match: A0A6J1HKE0 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 136/158 (86.08%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLL TLASTT TSSCTAW  RNSLFAR       RVFPSI+ AK AR GLYQL
Sbjct: 1   MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------RVFPSIRRAKAAR-GLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDT----VEIM 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLE S VIPQTKFSELGADSLDT    VEIM
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTEYSQVEIM 120

Query: 121 MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           M LEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 MALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 150

[Close]

BLAST of CmaCh08G008170 vs. ExPASy TrEMBL
Match: A0A5A7UWB3 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001490 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.3e-42
Identity = 112/155 (72.26%), Postives = 126/155 (81.29%), Query Frame = 0


Query: 2   SSLASSPLLATLASTTS-TSSCTAWHLRNSLFAR-VSLFCEQRVFPSIQMAKPARGGLYQ 61
           S+ ASSPL  TL  T+S  +  T  +LRN+L A+  SLF  +RVFPS++MAK A+G    
Sbjct: 3   STFASSPLPMTLPCTSSMRNKSTTLYLRNNLSAKDGSLFRGERVFPSMKMAKAAKGASL- 62

Query: 62  LPTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGL 121
           L   FKS I CS+AQPET++VVQEIIAKQLSLE SAVIPQTKFS+LGADSLDTVEIMM L
Sbjct: 63  LSKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL 122

Query: 122 EEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           EEKFGVSIGEGGAEGISTVQDAADLIEKVK SSAS
Sbjct: 123 EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 156

[Close]

BLAST of CmaCh08G008170 vs. NCBI nr
Match: XP_022999995.1 (uncharacterized protein LOC111494313 isoform X2 [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 5.3e-67
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR       RVFPSIQMAKPARGGLYQL
Sbjct: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR-------RVFPSIQMAKPARGGLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120

Query: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 147

[Close]

BLAST of CmaCh08G008170 vs. NCBI nr
Match: XP_023514490.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 144/154 (93.51%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLA SPLL TLASTTS S+CTAW  RNSLF RVSLFCEQRVFPSIQMAKPAR GLYQL
Sbjct: 1   MSSLALSPLLTTLASTTSISNCTAWRSRNSLFDRVSLFCEQRVFPSIQMAKPAR-GLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLE SAVIPQTKFSELGADSLDTVEIMM LE
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLEQSAVIPQTKFSELGADSLDTVEIMMALE 120

Query: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 153

[Close]

BLAST of CmaCh08G008170 vs. NCBI nr
Match: XP_022999994.1 (uncharacterized protein LOC111494313 isoform X1 [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 147/158 (93.04%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR       RVFPSIQMAKPARGGLYQL
Sbjct: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFAR-------RVFPSIQMAKPARGGLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDT----VEIM 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDT    VEIM
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTEYLQVEIM 120

Query: 121 MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 151

[Close]

BLAST of CmaCh08G008170 vs. NCBI nr
Match: XP_022964291.1 (uncharacterized protein LOC111464348 isoform X2 [Cucurbita moschata])

HSP 1 Score: 235.0 bits (598), Expect = 4.5e-58
Identity = 136/154 (88.31%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLL TLASTT TSSCTAW  RNSLFAR       RVFPSI+ AK AR GLYQL
Sbjct: 1   MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------RVFPSIRRAKAAR-GLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTVEIMMGLE 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLE S VIPQTKFSELGADSLDTVEIMM LE
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTVEIMMALE 120

Query: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 146

[Close]

BLAST of CmaCh08G008170 vs. NCBI nr
Match: XP_022964290.1 (uncharacterized protein LOC111464348 isoform X1 [Cucurbita moschata])

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-56
Identity = 136/158 (86.08%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MSSLASSPLLATLASTTSTSSCTAWHLRNSLFARVSLFCEQRVFPSIQMAKPARGGLYQL 60
           MSSLASSPLL TLASTT TSSCTAW  RNSLFAR       RVFPSI+ AK AR GLYQL
Sbjct: 1   MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------RVFPSIRRAKAAR-GLYQL 60

Query: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDT----VEIM 120
           PTYFKSNISCSLAQPETMQVVQEIIAKQLSLE S VIPQTKFSELGADSLDT    VEIM
Sbjct: 61  PTYFKSNISCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTEYSQVEIM 120

Query: 121 MGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 155
           M LEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Sbjct: 121 MALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 150

[Close]

BLAST of CmaCh08G008170 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 57  LYQLPTYFKSNISCSLAQPETMQVVQEIIAKQLSL-ELSAVIPQTKFSELGADSLDTVEI 116
           L QLPT  +  +SC+ A+PET+  V  ++ KQLSL E   +   TKF+ LGADSLDTVEI
Sbjct: 41  LRQLPT--RLTVSCA-AKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEI 100

Query: 117 MMGLEEKFGVSIGEGGAEGISTVQDAADLIEKV 149
           +MGLEE+FG+ + E  A+ I+TV+ AA LIE++
Sbjct: 101 VMGLEEEFGIEMAEEKAQSIATVEQAAALIEEL 130

[Close]

BLAST of CmaCh08G008170 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 68  ISCSLAQPETMQVVQEIIAKQLSL-ELSAVIPQTKFSELGADSLDTVEIMMGLEEKFGVS 127
           +SC++ Q ET++ V EI+ KQLSL +   V   TKF+ELGADSLDTVEI+MGLEE+FG++
Sbjct: 53  VSCAVKQ-ETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGIT 112

Query: 128 IGEGGAEGISTVQDAADLIEKV 149
           + E  A+ I+TVQ AA+LIE++
Sbjct: 113 MAEERAKEIATVQQAAELIEEL 133

[Close]

BLAST of CmaCh08G008170 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 57  LYQLPTYFKSNISCSLAQPETMQVVQEIIAKQLSL-ELSAVIPQTKFSELGADSLDTVEI 116
           L QLPT  +  + C+ A+PET+  V  ++ KQLSL E   +   TKF+ LGADSLDTVEI
Sbjct: 41  LRQLPT--RLTVYCA-AKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEI 100

Query: 117 MMGLEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSA 154
           +MGLEE+FG+ + E  A+ I+TV+ AA LIE++    A
Sbjct: 101 VMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLLEKA 135

[Close]

BLAST of CmaCh08G008170 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15
Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 68  ISCSLAQPETMQVVQEIIAKQLSLELSA-VIPQTKFSELGADSLDTVEIMMGLEEKFGVS 127
           ISC+ A+ ET+Q V +I+ +QL+L     +  ++KFS LGADSLDTVEI+M LEEKF +S
Sbjct: 47  ISCA-AKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNIS 106

Query: 128 IGEGGAEGISTVQDAADLIE 147
           + E  A+ I+T+Q+AADLIE
Sbjct: 107 VEESDAQNITTIQEAADLIE 125

[Close]

BLAST of CmaCh08G008170 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 78.2 bits (191), Expect = 6.5e-15
Identity = 43/83 (51.81%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 67  NISCSLAQPETMQVVQEIIAKQLSLEL-SAVIPQTKFSELGADSLDTVEIMMGLEEKFGV 126
           ++SC+ A+ ET++ V  I+ KQLSL     V+ +TKF++LGADSLDTVEI+MGLEE+F +
Sbjct: 51  SVSCA-AKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNI 110

Query: 127 SIGEGGAEGISTVQDAADLIEKV 149
            + E  A+ I+TV+ AA+LIE++
Sbjct: 111 QMAEEKAQKIATVEQAAELIEEL 132

The following BLAST results are available for this feature:

BLAST of CmaCh08G008170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52411	8.0e-18	49.18	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P93092	3.0e-17	58.54	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52413	4.0e-17	52.17	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=...	[more]
P52414	4.0e-17	48.36	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
P52412	4.4e-16	58.14	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]

BLAST of CmaCh08G008170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KH46	2.5e-67	95.45	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494313 PE=3 SV=1	[more]
A0A6J1KIN6	1.4e-65	93.04	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494313 PE=3 SV=1	[more]
A0A6J1HII2	2.2e-58	88.31	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1	[more]
A0A6J1HKE0	1.2e-56	86.08	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1	[more]
A0A5A7UWB3	1.3e-42	72.26	Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347...	[more]

BLAST of CmaCh08G008170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022999995.1	5.3e-67	95.45	uncharacterized protein LOC111494313 isoform X2 [Cucurbita maxima]	[more]
XP_023514490.1	2.2e-65	93.51	acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022999994.1	2.9e-65	93.04	uncharacterized protein LOC111494313 isoform X1 [Cucurbita maxima]	[more]
XP_022964291.1	4.5e-58	88.31	uncharacterized protein LOC111464348 isoform X2 [Cucurbita moschata]	[more]
XP_022964290.1	2.5e-56	86.08	uncharacterized protein LOC111464348 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh08G008170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54580.1	3.5e-16	52.69	acyl carrier protein 2	[more]
AT5G27200.1	3.5e-16	57.32	acyl carrier protein 5	[more]
AT1G54630.1	1.7e-15	50.00	acyl carrier protein 3	[more]
AT4G25050.1	2.9e-15	55.00	acyl carrier protein 4	[more]
AT3G05020.1	6.5e-15	51.81	acyl carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 76..147 e-value: 2.8E-22 score: 76.3
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 76..149 score: 16.353432
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 80..145 e-value: 2.9E-11 score: 43.6
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 75..149 score: 19.201668
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 71..149 e-value: 4.2E-22 score: 80.2
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 74..148
None	No IPR available	PANTHER	PTHR46153:SF2	ACYL CARRIER PROTEIN	coord: 35..152
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 35..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G008170.1	CmaCh08G008170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009416	response to light stimulus
molecular_function	GO:0000036	acyl carrier activity