CmaCh08G006880 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTAGAAAATTGCGAAAATCGCTGCTAGGTTACCTCTCGAAGATCAAAAGGCCAACGCCTCAGCTTCAATTTCCTAATCCCCAATCATTCAAATCTTCAAAAAGCTGGATTCTCGCAGGGTGTAAGCATCCGAAAACACTGTCGTTCGCCATCGATCGGAAGAATGGCGACGGCGCCGGTAACAACGCCACCGCGGACCCCGCCGCTGCCGCTACTCTCTCCGATGTCGATCGATTCCTCGTTGAGAACTTCCGATCGTTGTACATGAAAGAGGAGGAAGATTTCGAGGAGAAAAATATAGAAGAAGAAGGTCGAGAGAGCAAGAAGCAAGGAGTGGTTTCACCTGATTCGCCGGTTGATTCGAACGGCGGATCTCACCGATTCTTCTTCTCCCCTGGCTTGTCCGGATCTCCACCGAACGATTCTCTGACGGAATCGTCGGAAAATGTAGAATCGAGTTCTTCATCTTTGAACGGTGAAAATCAGAGCAAGGATGTGAAACTTCCGAACGATTGCATCGCGATTTTGAGGTACTCGCCGAATCCGCCTGAGGAATTTCGGCGAGCGATGAAAGAGATGATGGATTCTAACATGAAACAGCAGGAGAAAGTGGATTGGGAGTTTATGGAAGAACTTCTGTTCTCTTTTCTAAATCTGAACGATAAAAAGTCGCATAAACACATACTTAATGCTTTCGTTGATTTGATAGTGATCTTGCGGCAGAAGAAGGTTGAGGACGATGCTTCGAAGCCTCGAACAGTCCGAAGCGTGAGAATGGTGAGGAGGATGATGTGAAATCTGCAGAATCTGCAGAATCTTTGAAAATGATATCAAAGATCTTGATATCCTTAGCTTAACATTCTATCTGGTTCTCACAGTTTAGTCCCTACAATCTGTAAGCAACATTCCCATTCGAAGTTTTTTTTTTTTGGGTAAATTCTGTTACATTAATCTCCAATGTTACATTAATGTGCAGAAATTCAAATAAACTCCGATCTAAATTTACCTTCTGAAATTTATAATCAAAACTTTACCTTGCTAAATTTCAGTTTAAACTGGGAATGAAGAGGGTCTCGATGAGAGATTTATCTAGTTACTATATGGAGTTTGGGACGAGATTATATTATTGTCTTCCATCTTGCTAAATTTTAGTTTAAATTGGGAATGAGAAGGGTCTCCAAAAGAGTTTTCTCTGGTTATTATATGGGGTTTGAGACGAGATTATACTATTGTCGTCCAATTTGCTAAATTTCAGTTTAAACTAGAAATGGAGAAGTCTCTTTATTATACAGGGTTGGAGACGAGATTGTATTATCGTACATTGCCTCATATATATATATATATAAAATTTAATGGTAAACAACTCGATTGTAATATTAAGATTTGAGATTTTAACATTATATTATATTTGTTTATGAAATATTGTTAGATTTTTTTTTTTTTTTTTTTTTGAGGAAAACCCGAACTAAAATAAACTATAAAGGGATAGATTTGAAATAGAAAGTAGGATGGAGAAAACTTTATCGGAAGTGAGCCCACGTTGGTTAATTTAGTGGAAGATCAATGAAGAATATTATGTCTATTGGTATGCGTTCTTTTAGTAAGCCCAAAGGAAAATCATAGGACTTTAGAAATTATATGAAAAAAAAACATAATAATCGCGTAGTGTTCTAAGATTAATCTTAAATTAATTTAAAAGAACCACAAAATAGTCATCCAACTATCTAATTATCTGACTAAATTATTTAAATTTAAATAATAAAAAGAGAGAGAAAAGAATATTGGGCCTTTGCAGACGGTCGGGCCCAAAATGTTTTGGAGAAGGGAGGGCGGCCCAGACAGAGAAGGCCCATAAGGCCCAGTCCAGCGTTGAACAAACGGGGAAAATGAAAAGGCAGAGTGCGTATAGATCTTTCTAGAACTTCAGTATCTATCTCTAGACGACTCTAGGGACCACGAGTCACGACGTCTCCAGTTCTAAAGGCTGCCCCTCGAATCGGAAAATAAAATCAAAATTAAAGAAGCAGAAGAATATATATATATATATATATATATATAATTTATAAATAATATATAAAACTTGAAAATTCCACAGAAAGCCCTCGAAAGTGGTACGTAGCCCTTTTCTTTTATAAGCGCGGTCTTGTGGAGAGTTCCAGAACCCAAGAATTAAATCTCTCTTCCTTTCCATCGCTCTTGCTGTTCGGATCGCTCTGAAGGTTTGTTTCCATACGCCGCTGTTGTATTGATTCTGCTTTTCTTGTTCTCTTGAGCTGTAGATCTGAGAGTTTTGCTTCCTCGATGCGGCCATTTCCAACTTCTTTGTCTCTTACTAGATTTGTTTTCTTCAGATTCGGAGTGTTTTGATTTTACATTTCTATCAATTGTGCTCGTATTGCCGTTTCTAGGAATGAATCTATTGCTTCACTTTTTCTTTTTGTTCTTAGCTTTAATTACTGGTTAAAGCATTTCGACCTAGTTTGTTATGGAACATTTTGTTGATTATTTCATGTATTTAATGTGTTTTGTGGTTTCCATGTTTGATCTGTTTCTTGAAATGTTTTAACACACTGATATGGCAATAAGCATATGGCGAGTGTTATTGTACGGATTTGGATACCTATCGCCTCGAGTTTGACACAGTGAAATGAACGGATTGTTCTTGTTGGACTTGTGGATGTGTTTATGTCGTTTCTTCTTTCATTTCTCCGTTTGAATTTTATTTGAACGATTTTTTCCGATCAAATACGCAAGTTGGCATACTGATTGCTACTGCAATAGTTCCCGCGAACTATACACTTTACAATAATCACTGATGCGGTTCTCTTCAAGGGAATGCGATTGCATATCATTTTCCTATTGATAATAACAACATTCATTAATATTTTCAGGTTCTTCCATTTTTTTTGACAGGCCGATTGTTTTTGA ATGCCTAGAAAATTGCGAAAATCGCTGCTAGGTTACCTCTCGAAGATCAAAAGGCCAACGCCTCAGCTTCAATTTCCTAATCCCCAATCATTCAAATCTTCAAAAAGCTGGATTCTCGCAGGGTGTAAGCATCCGAAAACACTGTCGTTCGCCATCGATCGGAAGAATGGCGACGGCGCCGGTAACAACGCCACCGCGGACCCCGCCGCTGCCGCTACTCTCTCCGATGTCGATCGATTCCTCGTTGAGAACTTCCGATCGTTGTACATGAAAGAGGAGGAAGATTTCGAGGAGAAAAATATAGAAGAAGAAGGTCGAGAGAGCAAGAAGCAAGGAGTGGTTTCACCTGATTCGCCGGTTGATTCGAACGGCGGATCTCACCGATTCTTCTTCTCCCCTGGCTTGTCCGGATCTCCACCGAACGATTCTCTGACGGAATCGTCGGAAAATGTAGAATCGAGTTCTTCATCTTTGAACGGTGAAAATCAGAGCAAGGATGTGAAACTTCCGAACGATTGCATCGCGATTTTGAGGTACTCGCCGAATCCGCCTGAGGAATTTCGGCGAGCGATGAAAGAGATGATGGATTCTAACATGAAACAGCAGGAGAAAGTGGATTGGGAGTTTATGGAAGAACTTCTGTTCTCTTTTCTAAATCTGAACGATAAAAAGTCGCATAAACACATACTTAATGCTTTCGTTGATTTGATAGTGATCTTGCGGCAGAAGAAGGTTGAGGACGATGCTTCGAAGCCTCGAACAGTCCGAAGCGTGAGAATGCTTAACATTCTATCTGGTTCTCACAGTTTAGTCCCTACAATCTCGCGGTCTTGTGGAGAGTTCCAGAACCCAAGAATTAAATCTCTCTTCCTTTCCATCGCTCTTGCTGTTCGGATCGCTCTGAAGGCCGATTGTTTTTGA ATGCCTAGAAAATTGCGAAAATCGCTGCTAGGTTACCTCTCGAAGATCAAAAGGCCAACGCCTCAGCTTCAATTTCCTAATCCCCAATCATTCAAATCTTCAAAAAGCTGGATTCTCGCAGGGTGTAAGCATCCGAAAACACTGTCGTTCGCCATCGATCGGAAGAATGGCGACGGCGCCGGTAACAACGCCACCGCGGACCCCGCCGCTGCCGCTACTCTCTCCGATGTCGATCGATTCCTCGTTGAGAACTTCCGATCGTTGTACATGAAAGAGGAGGAAGATTTCGAGGAGAAAAATATAGAAGAAGAAGGTCGAGAGAGCAAGAAGCAAGGAGTGGTTTCACCTGATTCGCCGGTTGATTCGAACGGCGGATCTCACCGATTCTTCTTCTCCCCTGGCTTGTCCGGATCTCCACCGAACGATTCTCTGACGGAATCGTCGGAAAATGTAGAATCGAGTTCTTCATCTTTGAACGGTGAAAATCAGAGCAAGGATGTGAAACTTCCGAACGATTGCATCGCGATTTTGAGGTACTCGCCGAATCCGCCTGAGGAATTTCGGCGAGCGATGAAAGAGATGATGGATTCTAACATGAAACAGCAGGAGAAAGTGGATTGGGAGTTTATGGAAGAACTTCTGTTCTCTTTTCTAAATCTGAACGATAAAAAGTCGCATAAACACATACTTAATGCTTTCGTTGATTTGATAGTGATCTTGCGGCAGAAGAAGGTTGAGGACGATGCTTCGAAGCCTCGAACAGTCCGAAGCGTGAGAATGCTTAACATTCTATCTGGTTCTCACAGTTTAGTCCCTACAATCTCGCGGTCTTGTGGAGAGTTCCAGAACCCAAGAATTAAATCTCTCTTCCTTTCCATCGCTCTTGCTGTTCGGATCGCTCTGAAGGCCGATTGTTTTTGA MPRKLRKSLLGYLSKIKRPTPQLQFPNPQSFKSSKSWILAGCKHPKTLSFAIDRKNGDGAGNNATADPAAAATLSDVDRFLVENFRSLYMKEEEDFEEKNIEEEGRESKKQGVVSPDSPVDSNGGSHRFFFSPGLSGSPPNDSLTESSENVESSSSSLNGENQSKDVKLPNDCIAILRYSPNPPEEFRRAMKEMMDSNMKQQEKVDWEFMEELLFSFLNLNDKKSHKHILNAFVDLIVILRQKKVEDDASKPRTVRSVRMLNILSGSHSLVPTISRSCGEFQNPRIKSLFLSIALAVRIALKADCF Homology
BLAST of CmaCh08G006880 vs. ExPASy Swiss-Prot
Match: Q9S7T5 (Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.5e-39 Identity = 115/266 (43.23%), Postives = 163/266 (61.28%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy Swiss-Prot
Match: Q9FMC8 (Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-07 Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy Swiss-Prot
Match: F4I8R6 (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy Swiss-Prot
Match: Q9SKY9 (Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04 Identity = 54/210 (25.71%), Postives = 97/210 (46.19%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy Swiss-Prot
Match: O23341 (Transcription repressor OFP11 OS=Arabidopsis thaliana OX=3702 GN=OFP11 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.6e-04 Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy TrEMBL
Match: A0A6J1KJR3 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111494640 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 5.0e-139 Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy TrEMBL
Match: A0A6J1HKL3 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111464398 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 9.1e-133 Identity = 252/261 (96.55%), Postives = 256/261 (98.08%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy TrEMBL
Match: A0A5A7V0F8 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002380 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90 Identity = 190/266 (71.43%), Postives = 220/266 (82.71%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy TrEMBL
Match: A0A6J1CYB3 (Transcription repressor OS=Momordica charantia OX=3673 GN=LOC111015383 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90 Identity = 185/262 (70.61%), Postives = 216/262 (82.44%), Query Frame = 0
BLAST of CmaCh08G006880 vs. ExPASy TrEMBL
Match: A0A1S3CGB3 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103500574 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90 Identity = 190/266 (71.43%), Postives = 220/266 (82.71%), Query Frame = 0
BLAST of CmaCh08G006880 vs. NCBI nr
Match: KAG6593448.1 (Transcription repressor OFP14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 508.1 bits (1307), Expect = 5.4e-140 Identity = 274/308 (88.96%), Postives = 284/308 (92.21%), Query Frame = 0
BLAST of CmaCh08G006880 vs. NCBI nr
Match: XP_023000384.1 (transcription repressor OFP14-like [Cucurbita maxima]) HSP 1 Score: 503.8 bits (1296), Expect = 1.0e-138 Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CmaCh08G006880 vs. NCBI nr
Match: XP_023514747.1 (transcription repressor OFP14 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 486.1 bits (1250), Expect = 2.2e-133 Identity = 253/261 (96.93%), Postives = 257/261 (98.47%), Query Frame = 0
BLAST of CmaCh08G006880 vs. NCBI nr
Match: XP_022964363.1 (transcription repressor OFP14-like [Cucurbita moschata]) HSP 1 Score: 483.0 bits (1242), Expect = 1.9e-132 Identity = 252/261 (96.55%), Postives = 256/261 (98.08%), Query Frame = 0
BLAST of CmaCh08G006880 vs. NCBI nr
Match: KAG7025789.1 (Transcription repressor OFP14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 472.2 bits (1214), Expect = 3.3e-129 Identity = 246/255 (96.47%), Postives = 249/255 (97.65%), Query Frame = 0
BLAST of CmaCh08G006880 vs. TAIR 10
Match: AT1G79960.1 (ovate family protein 14 ) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-40 Identity = 115/266 (43.23%), Postives = 163/266 (61.28%), Query Frame = 0
BLAST of CmaCh08G006880 vs. TAIR 10
Match: AT5G04820.1 (ovate family protein 13 ) HSP 1 Score: 56.2 bits (134), Expect = 5.3e-08 Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of CmaCh08G006880 vs. TAIR 10
Match: AT1G05420.1 (ovate family protein 12 ) HSP 1 Score: 55.5 bits (132), Expect = 9.0e-08 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CmaCh08G006880 vs. TAIR 10
Match: AT2G32100.1 (ovate family protein 16 ) HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05 Identity = 54/210 (25.71%), Postives = 97/210 (46.19%), Query Frame = 0
BLAST of CmaCh08G006880 vs. TAIR 10
Match: AT4G14860.1 (ovate family protein 11 ) HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05 Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|