CmaCh08G005740 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G005740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
LocationCma_Chr08: 3275656 .. 3283204 (+)
RNA-Seq ExpressionCmaCh08G005740
SyntenyCmaCh08G005740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCCCCCCGCCTCAACAAAGCGGTTAAAACCACATAAACCGAATCCATAAATCGATCCAACTAAAAGAGAGAAAAAAAAATCATATTTAAATCTGAAAATGCCGAATTCGGCTGAACAAAAATGGCTATCGCCATATCCGCCGTCTCCCTTCCCTCACTCTTTCAGTACAAAAATTTAATTATCGCGCGAAAAAGCCGAATTCGTTCCTTCTCCATTCGATCTTGCAAGGATGTTTCCGGTGAAGGCGACGGCGGCGGCGAGCCTTTGCAGAAGCCGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCCGAGGGCAAGGACTATCTCTATAGGCTTGGCAACGAGGCAGATAATATGAACATCGCCGTCGGAGCTAGAGCTGGCGTCATCGACGATCTCTTCGCCGGGAACTTCCTTGGCAGAGACTGTAAGTGTCCGATTTATCACTGTTATTTCCTTTTCATTTTGTGGTTATGGTTTCAGTTTTCTTAGTGTTTTCGTTTTCGTGTTGATTTTCTTTGTAGCGGACATTGTGTTTGATTACCGCCAGAAGGTCACTAGATCGTTCGAGCACCTTCAAGGAGACTATTACATTGCCCCTGTTTTCATGGTAATTTTACCGGTTCTACATCGTTCGGGATCAGTTTTCTTTAGCTATTGACTCTTCTTCTTTGTTCTTCACTACTGTTCTTATTGTTCAGTTGAATTGATATTTTCAGTTAGTGCAACGTCAACCAATCTCGTGCTCTTGATTTTGACATATTTGATTCCAGTACTTGGAATCAAACTGAGCCTGTTAACTCTAGTTAAATTCGAGTAGAACTTGGGACATTTCCACCTTGGTTAATCGTTGCATTTTTTTTTTTTTTGAATCATGAAGGAGATTATTACATTGCCTCTGTTTTCTTGGTAATTTTGTCGTTCTACTTCGTTCCACCTCAGTTTGTTTTAATTATCGATCCTTTTCTTTGTTCTTCATTATTTTCAGTTGAATTGATATTTCCTGTAAGTGTAATGTACACTGTTCTTGTGCTCCTTGATCTTGAAATATTTAATTCCTGTACTTGGAATCGCAATTTGCCTTATAACTTTAACATTACAACGAGGAAAGAAATGTGAATTTTACCACCACTGGTTCATGGTCTAGATGCACATGTCTGTAGCATTCAGCTTCTTACTTTTTTTTTCTCTTTTTTATGTTTCTGCAATCTTTTGTGTTATTATTTGAAAATGATCATCTCTCAATAACCTGTCTTTTTACATTGTTATCATCGGGTTTTTTTTTTTCTTTTGACAGGATAAAGTTGGTAAGTTCCTTGGATCTTGGTATTGACAAACGGCATGTGATGAATTACATTTGAAGAAGTAATAAACTTCATTAATATCTGTGTTGCACTCCACTTTATTTGTTGCATTCTTTTTAGATTCGAACAGTAATTCAGTTGCTATTAGATGTAAGATCATATTTAAATCTTAACAATTTAGTTATATAAAACCAATCAATGACTGCTTCACTCTCAGCAATTTATGTATATATTGTTTGTTCATTCTGTATTGTACTCGATATCCTTTTAAAAACTTATGGCTGTGTTTTGGTTCTTTAAGCTCTCTTCAAATATATTTATGTAGGCGAACTGCAGAAGAACAGTGAATAAATTGTCAGTAGTTGAAATACAGATCTTAATTTGTGATACTTTTTTTGTTGAGTTTTTAGAAAGGGAATTCTTTTAAGCACTTAACAATCAACTACAGCTTCTATGACAATTTAATTCACGACAAAATCAACAAACATCCTCATTGTTGGATAAGAAAGTCATTATTTCATATTAAATGCTCTAAATTGGTCATAAGATGGTCTGACCTCTTTCTGTCTTCTGACTAATGAGCCTTTCTGCTGATTGTAAGCTAATATTTTTGTTGTAATCTGACTCACTGGAAGAGAAATGCAGCATGAAGATGTGATGGTAGTGCTTTTCTCTTTAGGAATTTAAAACGGAGAAGTTTTGCGGGAAGACTCTACCTTCTTTCATGAAATGAGTACAAACAAGTAGCAGTTAAGTTAACACACGTTAACATGGTCTCTGTTGTTGTGCAGTATGCCACATTGTGAAGAACTTCATAGTTCACCTTCTCAATATCAAAGTTCCCCTTATCTTAGGTATGCATTCGTTTAATTTACTGGTTTCAATGCAAAATTCTTTTATAGTCAATTTAATAGAACACAATGTTAAAAACCTATTATTGAAAAGTTCATCAATTTATGTGTCAATGGGAGTCTATTCCATTGCTTTGAAATCTTCATCAGTTTTTCCTTTTGAGAATGGAATCAGTGTCTTATCAATCTTGACATGGTTAACTTCATGATAATGCTAGAAACTTTTCTTCTTTTTATTTTTGATTTGTAGGTTACGCTGGATAAATTTTATCTTGACCAGTTCCATATTTTTTCCATAAGAGATGAGTGGGCAGTTGGAAATATAAATGTTTTGTATTACAGGTATTTGGGGAGGAAAGGGTCAAGGAAAGTCATTTCAGACTGAACTTATATTCCAGGCCATGGGAGTGGAACCCGTGATAATGTCCGCTGGTGAATTAGAATCAGAAAGAGCTGGTAAGATAGGACCAAGATGACTTATTTGAATCTTTTAGTCCTTAACTTGATGGTGGATTAATGGGTCAAGTTGAATAGATTTCTCACCAAGTCTACGGCCACTTGAAAAGCTTGAATGAAAATTTTGAAAGGTGAAAGCATTTCATATTCTTTAATCAGGTTATGTAGATATTTTTTGTAAAGTAGCTATGTAATTATATGGATTAATATTCTCTCAGTTGTAGTCTCTCTATCTCTCTCTACTAAAACACGTATGAATTGGTCAACTCACGCAGTTATTTGGTGCATGAAAAAGTTTTTGCGTCAGTTCCTAGAGCAAAAAATCCGGTTCTATGCATGCACAAGTCTGTAGCTTTTGTATTTATGTTTGAGTGAAAATTGGAATGCCAATAGTGAACTTTCATCAACAGGTGAACCAGGAAAACTGATACGTGAACGCTATAGAACAGCTTCTCAAGTGGTCCAGAATCAAGTTAGAAACTTTACCACTTACAGTCTAGATATAAGTATGTCTTGGGTTAAATCATAAATGTTGCCAAGTGCAGTTCTACATGCTCAATGTTCCATATTTTTCTACTGAGTATCCCTTCTTATTCTAGTGCCGAAGTGTCACCCTTAGGGTCTGCTCTTTTATATATTTAGTGATTTGACTGCAACTGCTCTGCGAAAAACATTGTTTGTGTAGATAACATTAGAAGGAAGGTCGAGAAAGTAGCTTTTTGATGAGCCTTCTATTATTTTATGTCCTCATTAACAGGAAAACTTACAAAAAATATATATATTCTGGAAAGACATCCCCTGTTTCAATATGGCTGACAATATTAGAAGGTGGACTTTGGATAAGTTCGTTTTTATTTAACTAGCTATAAATATCAATTATTTTTTGCGTGACTTATTTTAAACTTTTCATATTGTTCATTTATTTATTGATTGAACTTTCTCATAGGTCATGCGACTCATACCATTTTGTTTTTCTGACATTAGTTATGTTATTCGATCTGGCAAATCCGAAGTGTTTATTCAGACCTGTATTTTGAATTGTCAAAAGTCACTAGTCACTTTGTGGTCTACTCTATCATCATGGTCTTACTCTTACATATTTGAAAGATCTTTTGGATTCTTTTAGAAGTTTATGTGCAAATGAATTGGCGTTCTTTACTTTGTATTTCTTACTTGTTCATATAATTTGTACTTTCTGTGAGTTTTTTTGTGAATATAATGTGATACAAGGTGCAACTGCAAAGTGCAAAATGATTCATAATTAGTTGAAGAACATATTATAGATGCTTAATAAATAAAAATCATAACATGAGAGACGCTTATTGTTTTCGTAGGCCATGCAGTGTATGCACTTACCACTTAGGTGCCCGTTGAACAACTCTGTGTTCAGTTGGTCATGTTTTCATTCAGGGCTGCCCAAAAGTTTATTTCAAACAGACTATCAGTTTTGAAATTGTATTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATGGTTGTTTTACTCTTTTGGTAATTCTACTGCCCAACGTTTTCTTCATTATAAATTATTTTCAATGCATTCAGAAATAATTCATGTATGACTTCGGGACTTTTCTTGACCATTTCAGGGGAAGTTGAGTTGTTTGATGATCAATGACATTGATGCTGGCATTGGTAGATTTGGTAAGATTATATTTACTTAGACATAAAATTATAAAAAAAGTGAATAAAAATAACGTTAATGCATCATCTGTACCTCTTTTAAAGATAATTCAAATTAACATTTGGAGTTAAATTTTATTAGATTATAATATACATTGAAGTATTTATTCAACCGTCTATAATAAGTATGCTTATATTTTGTTCTTGTCTAGGGAATACACAGGTGACAGTCAATAATCAAATTGTTGCTGGAACTCTGATGAATCTAGCTGACAACCCTAACAGAGTTAGCATTGGACAAGATTGGCGAGAAGCAGATATTACAAACAGAATTCCGATCATTCTTACTGGAAATGATTTTTCAACTATTTATGCTCCCTTAATTCGTGATGGCAGGATGGAAAAATTCTACTGGTATGAATTAATTGTTTTCAAGATTATTACGTTAACTTCTTAAAGAAGTTACAATATATTGTACTAGTTGCTCCAGATTTAGATCTGTGATCATGTTCGGATCCTAATGTATAAGTTACATTCTATACTTGTGATACTCACCCTCTTGTTTCCTTTTGTTTTTCAAGTCATAAATAGTATTATAGCTAAACCTCCCTCTTCTAAAATGTGATTTGGTAACAGGCAGCCTAACCGGGAAGACATAGTGAATATTGTTCATAGAATGTATGAGAAGGATGGGATATCCAGGGCTCAGGTCATTGACATCGTAAACACGTTTCCTAACCAAGGTAAGAAACCTTTTTTGTGCAATTTTAAAGGTTTCAAATTGGGGTTGATACCACCAACAAGTTTGTGGGAAACGACTCCTTTTCGCTTAGCGAGGATCAATTATAAATTCCAATAAGTTGAACTTGAAGTAGTATCATGGTCACTCTTGCTCTCTCGTTCTCTCTTAGTTTGTGGAGTTTTGTACGACCATGAAAATTCTTTATATTCATTTAGTCGTATCTTGTAAATTCAATATACTTATATAGCATTTTTGTTTCATCACAAATGTAAATAGCTGCCAACAATTGTATGTTTCACACATACAGAGAAAATTTTGGTGTATGATTTGTGGGGAGTGAGGGAGGTTAGAAGGTCTCAGGACGATATTTTTCTGTCTCTGACACTCTAATATCCACAACGTACAGCATTCTTAACTTTCAAAGCAAAGTTGTGAACGTATCATCATTATCTTACATTTAAAAATTGATCCTTTTCTTTTTTCTCAGCTTTGGATTTTTATGGAGCTCTAAGGTCACGGACATATGATACATCCATATCTAAGGTATCTAACATTTTCATTGGCATTTGTAAGACAAGACCTTGATACTATCAATGTTTCTTATAAATCATTTATTGAATGAAGGTGTTAGGAACCATTCCATCCATTAGAAAAGTTGAATAATTTAATATTTTCACATCGAACTCCCTTTTTGTTTCAGTGGGTTGATGATATTGGAGGAATGGAAAAGCTAGGAGAAAAGCTTCTTAAGAGAAGGAAGAATGAAGAGCTTCCTACATTCACACCACCAGAGGTGATCAATCTATAACATTTCCAAATTCATGCTTATTTGCTTTGTCTATTCTGCTAGTCCTTTAATGGCTTGATGTTGATCAATAATTACTTAGTCGATTGATCTATCAACAAGTACGTGGGTACTATTAATTTTTTTTTACTTTTATAGATACATAATGTTGATGTATTCACAATGAAAGTACTCTATAGCACGTTAATTTATGAAAATTTTCTTAATCGTCTGTATGATAGAATAAATAATACTTAATATCACATTGAAGCGGAGCTGTGTAGCTCTCTAAAGAAGTCTAGCATGGGTATTCACACTATTTTATATCCTCGCTTCACCAATGTGATCATTATCCATCTTCACCGTACAGTAAGTTTTAATTGTTATAATAAAACGTATGTCTTCTTGTTCGTTCTGAAGATCTGTATGACATTCCAACTATTTAACTCTGAATCGAAAATGACTAGTTGCACATAGTTACCTTTTGTCTATGGAATATTTAGGAAGTATATATGTAAATTTGTTCCACAATGGTAATATAATGAATTTTTTCTGATAGTCTTCTGGAGTATACTGTCTGGATTTGCATAAAGTTAAAAGGAACGAACAGAACAGAACTCACTACTTTAGTTGAAAATTATTTATAGTCCTTTTGCTCTTTTCTTTATTATTTAATACAGAATCAGTGAAGTATGTCATTCACTATTTCTATGTCCATCGTCTAGTTACTTGAACTTAAAAGTATAGGTAGACATGGAGTGACTTTTGTATTTGGTTGAACAGCAAACAATGGACACCCTTCTTGAAGCAGGCTATTCTTTGGTCAAAGAACAGCAATTTGTCATGGAGACTAAGCTTTCAAAAGAATACATGAAGAACATGGACGACTAGCTAGAAAAGTGAGATAGTGACTTAAATTTTTTTGTGATATCTGTTCACATCACATTTTTCATTGATTGACAAGCGAATTCATGTATTTTTATTGTCCACGGTATTCGTTACTTAATTCTCTTTTTTTATGAGCACATCTGAACCAAGCATTTATGGTTCACATCGTTAGTCACTGCATAAATATATGTTACATTTATGACTGCGACCTACTTAATTTGTCATGTCAAGAGATCAATTTTGAGTGAAACTTCTTATGGCCACTGTCTTATTCGGTGGGCTCTTTGGATGGTTAGTCTCAAACCTTAC

mRNA sequence

AAGCCCCCCGCCTCAACAAAGCGGTTAAAACCACATAAACCGAATCCATAAATCGATCCAACTAAAAGAGAGAAAAAAAAATCATATTTAAATCTGAAAATGCCGAATTCGGCTGAACAAAAATGGCTATCGCCATATCCGCCGTCTCCCTTCCCTCACTCTTTCAGTACAAAAATTTAATTATCGCGCGAAAAAGCCGAATTCGTTCCTTCTCCATTCGATCTTGCAAGGATGTTTCCGGTGAAGGCGACGGCGGCGGCGAGCCTTTGCAGAAGCCGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCCGAGGGCAAGGACTATCTCTATAGGCTTGGCAACGAGGCAGATAATATGAACATCGCCGTCGGAGCTAGAGCTGGCGTCATCGACGATCTCTTCGCCGGGAACTTCCTTGGCAGAGACTCGGACATTGTGTTTGATTACCGCCAGAAGGTCACTAGATCGTTCGAGCACCTTCAAGGAGACTATTACATTGCCCCTGTTTTCATGGATAAAGTTGTATGCCACATTGTGAAGAACTTCATAGTTCACCTTCTCAATATCAAAGTTCCCCTTATCTTAGGTATTTGGGGAGGAAAGGGTCAAGGAAAGTCATTTCAGACTGAACTTATATTCCAGGCCATGGGAGTGGAACCCGTGATAATGTCCGCTGGTGAATTAGAATCAGAAAGAGCTGGTGAACCAGGAAAACTGATACGTGAACGCTATAGAACAGCTTCTCAAGTGGTCCAGAATCAAGTTAGAAACTTTACCACTTACAGTCTAGATATAAATAACATTAGAAGGAAGGTCGAGAAAGGGAAGTTGAGTTGTTTGATGATCAATGACATTGATGCTGGCATTGGTAGATTTGGGAATACACAGGTGACAGTCAATAATCAAATTGTTGCTGGAACTCTGATGAATCTAGCTGACAACCCTAACAGAGTTAGCATTGGACAAGATTGGCGAGAAGCAGATATTACAAACAGAATTCCGATCATTCTTACTGGAAATGATTTTTCAACTATTTATGCTCCCTTAATTCGTGATGGCAGGATGGAAAAATTCTACTGGCAGCCTAACCGGGAAGACATAGTGAATATTGTTCATAGAATGTATGAGAAGGATGGGATATCCAGGGCTCAGGTCATTGACATCGTAAACACGTTTCCTAACCAAGCTTTGGATTTTTATGGAGCTCTAAGGTCACGGACATATGATACATCCATATCTAAGTGGGTTGATGATATTGGAGGAATGGAAAAGCTAGGAGAAAAGCTTCTTAAGAGAAGGAAGAATGAAGAGCTTCCTACATTCACACCACCAGAGCAAACAATGGACACCCTTCTTGAAGCAGGCTATTCTTTGGTCAAAGAACAGCAATTTGTCATGGAGACTAAGCTTTCAAAAGAATACATGAAGAACATGGACGACTAGCTAGAAAAGTGAGATAGTGACTTAAATTTTTTTGTGATATCTGTTCACATCACATTTTTCATTGATTGACAAGCGAATTCATGTATTTTTATTGTCCACGGTATTCGTTACTTAATTCTCTTTTTTTATGAGCACATCTGAACCAAGCATTTATGGTTCACATCGTTAGTCACTGCATAAATATATGTTACATTTATGACTGCGACCTACTTAATTTGTCATGTCAAGAGATCAATTTTGAGTGAAACTTCTTATGGCCACTGTCTTATTCGGTGGGCTCTTTGGATGGTTAGTCTCAAACCTTAC

Coding sequence (CDS)

ATGGCTATCGCCATATCCGCCGTCTCCCTTCCCTCACTCTTTCAGTACAAAAATTTAATTATCGCGCGAAAAAGCCGAATTCGTTCCTTCTCCATTCGATCTTGCAAGGATGTTTCCGGTGAAGGCGACGGCGGCGGCGAGCCTTTGCAGAAGCCGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCCGAGGGCAAGGACTATCTCTATAGGCTTGGCAACGAGGCAGATAATATGAACATCGCCGTCGGAGCTAGAGCTGGCGTCATCGACGATCTCTTCGCCGGGAACTTCCTTGGCAGAGACTCGGACATTGTGTTTGATTACCGCCAGAAGGTCACTAGATCGTTCGAGCACCTTCAAGGAGACTATTACATTGCCCCTGTTTTCATGGATAAAGTTGTATGCCACATTGTGAAGAACTTCATAGTTCACCTTCTCAATATCAAAGTTCCCCTTATCTTAGGTATTTGGGGAGGAAAGGGTCAAGGAAAGTCATTTCAGACTGAACTTATATTCCAGGCCATGGGAGTGGAACCCGTGATAATGTCCGCTGGTGAATTAGAATCAGAAAGAGCTGGTGAACCAGGAAAACTGATACGTGAACGCTATAGAACAGCTTCTCAAGTGGTCCAGAATCAAGTTAGAAACTTTACCACTTACAGTCTAGATATAAATAACATTAGAAGGAAGGTCGAGAAAGGGAAGTTGAGTTGTTTGATGATCAATGACATTGATGCTGGCATTGGTAGATTTGGGAATACACAGGTGACAGTCAATAATCAAATTGTTGCTGGAACTCTGATGAATCTAGCTGACAACCCTAACAGAGTTAGCATTGGACAAGATTGGCGAGAAGCAGATATTACAAACAGAATTCCGATCATTCTTACTGGAAATGATTTTTCAACTATTTATGCTCCCTTAATTCGTGATGGCAGGATGGAAAAATTCTACTGGCAGCCTAACCGGGAAGACATAGTGAATATTGTTCATAGAATGTATGAGAAGGATGGGATATCCAGGGCTCAGGTCATTGACATCGTAAACACGTTTCCTAACCAAGCTTTGGATTTTTATGGAGCTCTAAGGTCACGGACATATGATACATCCATATCTAAGTGGGTTGATGATATTGGAGGAATGGAAAAGCTAGGAGAAAAGCTTCTTAAGAGAAGGAAGAATGAAGAGCTTCCTACATTCACACCACCAGAGCAAACAATGGACACCCTTCTTGAAGCAGGCTATTCTTTGGTCAAAGAACAGCAATTTGTCATGGAGACTAAGCTTTCAAAAGAATACATGAAGAACATGGACGACTAG

Protein sequence

MAIAISAVSLPSLFQYKNLIIARKSRIRSFSIRSCKDVSGEGDGGGEPLQKPKRLSEKSSWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIRRKVEKGKLSCLMINDIDAGIGRFGNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYMKNMDD
Homology
BLAST of CmaCh08G005740 vs. ExPASy Swiss-Prot
Match: P93431 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RCA PE=1 SV=2)

HSP 1 Score: 331.3 bits (848), Expect = 1.7e-89
Identity = 168/323 (52.01%), Postives = 221/323 (68.42%), Query Frame = 0

Query: 117 TRSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIF 176
           T  F++  G +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+F
Sbjct: 112 TYDFDNTMGGFYIAPAFMDKLVVHISKNFMT-LPNIKVPLILGIWGGKGQGKSFQCELVF 171

Query: 177 QAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIRRKVE 236
             MG+ P++MSAGELES  AGEP KLIR+RYR A+ +                     ++
Sbjct: 172 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADI---------------------IK 231

Query: 237 KGKLSCLMINDIDAGIGRF-GNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNR 296
           KGK+ CL IND+DAG GR  G TQ TVNNQ+V  TLMN+ADNP  V +   + + D   R
Sbjct: 232 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKED-NPR 291

Query: 297 IPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTF 356
           +PII+TGNDFST+YAPLIRDGRMEKFYW P R+D V +   ++  D +    ++ IV++F
Sbjct: 292 VPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSF 351

Query: 357 PNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLL 416
           P Q++DF+GALR+R YD  + KWV D  G+E +G++L+  R  E  P F  P+ T++ L+
Sbjct: 352 PGQSIDFFGALRARVYDDEVRKWVSDT-GVENIGKRLVNSR--EGPPEFEQPKMTIEKLM 408

Query: 417 EAGYSLVKEQQFVMETKLSKEYM 439
           E GY LVKEQ+ V   +L+++Y+
Sbjct: 412 EYGYMLVKEQENVKRVQLAEQYL 408

BLAST of CmaCh08G005740 vs. ExPASy Swiss-Prot
Match: O49074 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii OX=28526 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 5.6e-88
Identity = 196/448 (43.75%), Postives = 267/448 (59.60%), Query Frame = 0

Query: 1   MAIAISAVSLPSL--FQYKNLIIARKSRIRSFSIRSCKDVSGEGDGGGEPLQKPKRLSEK 60
           MA ++S +   S       N +        +F  +S K V  +G    +   +  R+  +
Sbjct: 1   MAASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQ 60

Query: 61  SSWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLF-AGNFLGRDSDIVFDYRQKVT 120
              E K+   K  LY      D  +IA G   G++D LF A    G    I+  Y + V+
Sbjct: 61  EVDETKEDRWKG-LYD-NTSDDQQDIARG--KGLVDSLFQAPTGTGTHHAIMNSY-EYVS 120

Query: 121 RSFEHLQGD-----YYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQT 180
           ++ +  Q D     +YIAP FMDK+V HI KNF+  L NIKVPLILG+WGGKGQGKSFQ 
Sbjct: 121 QALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGVWGGKGQGKSFQC 180

Query: 181 ELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIR 240
           EL+F+ MG+ P++MSAGELES  AGEP KLIR+RYR A+++++                 
Sbjct: 181 ELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIR----------------- 240

Query: 241 RKVEKGKLSCLMINDIDAGIGRF-GNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREAD 300
               KG + CL IND+DAG GR  G TQ TVNNQ+V  TLMN+ADNP  V +   + + +
Sbjct: 241 ----KGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQE 300

Query: 301 ITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDI 360
              R+PII+TGNDFST+YAPLIRDGRMEKFYW P RED + +   ++  D +    V+ I
Sbjct: 301 -NARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKI 360

Query: 361 VNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTM 420
           V++FP Q++DF+GALR+R YD  + KWV    G+E +GEKLL  R     PTF  P+ T+
Sbjct: 361 VDSFPGQSIDFFGALRARVYDDEVRKWVSGT-GIELIGEKLLNSRDGP--PTFEQPKMTL 417

Query: 421 DTLLEAGYSLVKEQQFVMETKLSKEYMK 440
           + LLE G  LV+EQ+ V   +L++ Y+K
Sbjct: 421 EKLLEYGNMLVQEQENVKRVQLAETYLK 417

BLAST of CmaCh08G005740 vs. ExPASy Swiss-Prot
Match: Q9ZT00 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays OX=4577 GN=RCA1 PE=2 SV=3)

HSP 1 Score: 325.9 bits (834), Expect = 7.3e-88
Identity = 173/355 (48.73%), Postives = 235/355 (66.20%), Query Frame = 0

Query: 91  GVIDDLFAGNFLGRDSDIV----FDYRQKVTRS--FEHLQGDYYIAPVFMDKVVCHIVKN 150
           G++D+LF    +G  + +     +DY  +  +S  F+++   +YIA  FMDK+V H+ KN
Sbjct: 86  GLVDNLFQAP-MGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKN 145

Query: 151 FIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIR 210
           F+  L NIKVPLILGIWGGKGQGKSFQ EL+F  MG+ P++MSAGELES  AGEP KLIR
Sbjct: 146 FMT-LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIR 205

Query: 211 ERYRTASQVVQNQVRNFTTYSLDINNIRRKVEKGKLSCLMINDIDAGIGRF-GNTQVTVN 270
           +RYR AS +                     ++KGK+SCL IND+DAG GR  G TQ TVN
Sbjct: 206 QRYREASDL---------------------IKKGKMSCLFINDLDAGAGRMGGTTQYTVN 265

Query: 271 NQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYW 330
           NQ+V  TLMN+ADNP  V +   + + D   R+PII+TGNDFST+YAPLIRDGRMEKFYW
Sbjct: 266 NQMVNATLMNIADNPTNVQLPGMYNKED-NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYW 325

Query: 331 QPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIG 390
            P RED + +   ++  DG+    V+ +V+TFP Q++DF+GALR+R YD  + +WV +  
Sbjct: 326 APTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSET- 385

Query: 391 GMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYM 439
           G+E +  KL+  +  E  PTF  P+ T++ LLE G+ LV EQ+ V   +L+ +Y+
Sbjct: 386 GVENIARKLVNSK--EGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYL 413

BLAST of CmaCh08G005740 vs. ExPASy Swiss-Prot
Match: Q7X999 (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata OX=66636 GN=RCA2 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.8e-87
Identity = 169/354 (47.74%), Postives = 230/354 (64.97%), Query Frame = 0

Query: 91  GVIDDLFAGNFLGRDSDIV---FDYRQKVTRSF--EHLQGDYYIAPVFMDKVVCHIVKNF 150
           G++D LF           V   +DY  +  R +  ++    +YIAP FMDK+V HI KNF
Sbjct: 90  GMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNF 149

Query: 151 IVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRE 210
           +  L NIK+PLILGIWGGKGQGKSFQ EL+F  MG+ P++MSAGELES  AGEP KLIR+
Sbjct: 150 L-SLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 209

Query: 211 RYRTASQVVQNQVRNFTTYSLDINNIRRKVEKGKLSCLMINDIDAGIGRF-GNTQVTVNN 270
           RYR A+ +                     ++KGK+ CL IND+DAG GR  G TQ TVNN
Sbjct: 210 RYREAADI---------------------IKKGKMCCLFINDLDAGAGRMGGTTQYTVNN 269

Query: 271 QIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQ 330
           Q+V  TLMN+ADNP  V +   + + +   R+PII+TGNDFST+YAPLIRDGRMEKFYW 
Sbjct: 270 QMVNATLMNIADNPTNVQLPGMYNKEE-NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWA 329

Query: 331 PNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGG 390
           P RED + +   ++  D +    ++ +V+ FP Q++DF+GALR+R YD  + KWV ++ G
Sbjct: 330 PTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEV-G 389

Query: 391 MEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYM 439
           ++ +G+KL+  +  E  PTF  P+ T+D LL+ G  LV+EQ+ V   +L+ +YM
Sbjct: 390 VDTIGKKLVNSK--EGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYM 417

BLAST of CmaCh08G005740 vs. ExPASy Swiss-Prot
Match: Q40565 (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RCA PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.6e-87
Identity = 188/424 (44.34%), Postives = 259/424 (61.08%), Query Frame = 0

Query: 29  SFSIRSCKDVSGEGDGGGEPLQKPKRLSEKSSWEAKDSEGKDYLYR-------LGNEADN 88
           +F  ++ K V G+G    +   +  R++     E KD++ K   Y             D 
Sbjct: 31  AFFGKTLKKVYGKGVSSPKVTNRSLRIAA----EEKDADPKKQTYSDRWKGLVQDFSDDQ 90

Query: 89  MNIAVGARAGVIDDLF-AGNFLGRDSDIV--FDYRQKVTRSF--EHLQGDYYIAPVFMDK 148
            +IA G   G++D LF A    G    ++  ++Y  +  R +  ++    +YIAP FMDK
Sbjct: 91  QDIARG--KGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDK 150

Query: 149 VVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERA 208
           +V HI KNF+  L NIKVPLILG+WGGKGQGKSFQ EL+F+ MG+ P++MSAGELES  A
Sbjct: 151 LVVHITKNFL-KLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNA 210

Query: 209 GEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIRRKVEKGKLSCLMINDIDAGIGRF- 268
           GEP KLIR+RYR A+++++                     KG + CL IND+DAG GR  
Sbjct: 211 GEPAKLIRQRYREAAEIIR---------------------KGNICCLFINDLDAGAGRMG 270

Query: 269 GNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRD 328
           G TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+PII+TGNDFST+YAPLIRD
Sbjct: 271 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQE-NARVPIIVTGNDFSTLYAPLIRD 330

Query: 329 GRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSI 388
           GRMEKFYW P RED + +   ++  D +    VI IV+TFP Q++DF+GALR+R YD  +
Sbjct: 331 GRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEV 390

Query: 389 SKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSK 440
            KWV    G+E +G+KLL     +  PTF  P+ T++ LLE G  LV+EQ+ V   +L++
Sbjct: 391 RKWVSGT-GIEAIGDKLL--NSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAE 422

BLAST of CmaCh08G005740 vs. TAIR 10
Match: AT1G73110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 612.8 bits (1579), Expect = 2.1e-175
Identity = 299/401 (74.56%), Postives = 343/401 (85.54%), Query Frame = 0

Query: 43  DGGGEPLQKPKRLSEKSSWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFL 102
           DGG +P    K+LSE+SSWE KDSEGKDYLYRLG E+DN+NIAVGAR+G+IDD+F G+FL
Sbjct: 55  DGGAKP---RKKLSEQSSWEVKDSEGKDYLYRLGAESDNVNIAVGARSGMIDDVFIGDFL 114

Query: 103 GRDSDIVFDYRQKVTRSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWG 162
           G+DSDIVFDYRQK TRSFEHLQGDYYIAP F+DKV  HIVKN++   LNIK+PLILGIWG
Sbjct: 115 GKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKIPLILGIWG 174

Query: 163 GKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFT 222
           GKGQGK+FQTELIF+ MGVEPVIMSAGELES+RAGEPG+LIR+RYRTASQV+QNQ     
Sbjct: 175 GKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQ----- 234

Query: 223 TYSLDINNIRRKVEKGKLSCLMINDIDAGIGRFGNTQVTVNNQIVAGTLMNLADNPNRVS 282
                          GK+S LMINDIDAG+GRFG TQ+TVNNQIV GTLMNLADNP RVS
Sbjct: 235 ---------------GKMSVLMINDIDAGLGRFGETQMTVNNQIVVGTLMNLADNPTRVS 294

Query: 283 IGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDG 342
           +GQ+WREAD+ NR+P+I+TGNDFST+YAPLIR+GRMEKFYWQP REDIVNIV RMYEKDG
Sbjct: 295 VGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIVNIVSRMYEKDG 354

Query: 343 ISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELP 402
           ISR  VI IV+ FPNQALDFYGALRSRTYD SI KWVD+ GGME LG+ LL+R+K +E+P
Sbjct: 355 ISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVP 414

Query: 403 TFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYMKNMDD 444
            FT PEQT++ LLE+GYSL+ EQ+ +METKLSKEYMKNMDD
Sbjct: 415 QFTAPEQTVEALLESGYSLINEQKLIMETKLSKEYMKNMDD 432

BLAST of CmaCh08G005740 vs. TAIR 10
Match: AT2G39730.1 (rubisco activase )

HSP 1 Score: 313.2 bits (801), Expect = 3.5e-85
Identity = 161/321 (50.16%), Postives = 215/321 (66.98%), Query Frame = 0

Query: 119 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 178
           + +++   +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+   
Sbjct: 123 NLDNMMDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGIWGGKGQGKSFQCELVMAK 182

Query: 179 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIRRKVEKG 238
           MG+ P++MSAGELES  AGEP KLIR+RYR A+ +                     ++KG
Sbjct: 183 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADL---------------------IKKG 242

Query: 239 KLSCLMINDIDAGIGRF-GNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIP 298
           K+ CL IND+DAG GR  G TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+P
Sbjct: 243 KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEE-NARVP 302

Query: 299 IILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPN 358
           II TGNDFST+YAPLIRDGRMEKFYW P RED + +   ++  D I    ++ +V+ FP 
Sbjct: 303 IICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPG 362

Query: 359 QALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEA 418
           Q++DF+GALR+R YD  + K+V+ + G+EK+G++L+  R  E  P F  PE T + L+E 
Sbjct: 363 QSIDFFGALRARVYDDEVRKFVESL-GVEKIGKRLVNSR--EGPPVFEQPEMTYEKLMEY 417

Query: 419 GYSLVKEQQFVMETKLSKEYM 439
           G  LV EQ+ V   +L++ Y+
Sbjct: 423 GNMLVMEQENVKRVQLAETYL 417

BLAST of CmaCh08G005740 vs. TAIR 10
Match: AT2G39730.2 (rubisco activase )

HSP 1 Score: 313.2 bits (801), Expect = 3.5e-85
Identity = 161/321 (50.16%), Postives = 215/321 (66.98%), Query Frame = 0

Query: 119 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 178
           + +++   +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+   
Sbjct: 123 NLDNMMDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGIWGGKGQGKSFQCELVMAK 182

Query: 179 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIRRKVEKG 238
           MG+ P++MSAGELES  AGEP KLIR+RYR A+ +                     ++KG
Sbjct: 183 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADL---------------------IKKG 242

Query: 239 KLSCLMINDIDAGIGRF-GNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIP 298
           K+ CL IND+DAG GR  G TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+P
Sbjct: 243 KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEE-NARVP 302

Query: 299 IILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPN 358
           II TGNDFST+YAPLIRDGRMEKFYW P RED + +   ++  D I    ++ +V+ FP 
Sbjct: 303 IICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPG 362

Query: 359 QALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEA 418
           Q++DF+GALR+R YD  + K+V+ + G+EK+G++L+  R  E  P F  PE T + L+E 
Sbjct: 363 QSIDFFGALRARVYDDEVRKFVESL-GVEKIGKRLVNSR--EGPPVFEQPEMTYEKLMEY 417

Query: 419 GYSLVKEQQFVMETKLSKEYM 439
           G  LV EQ+ V   +L++ Y+
Sbjct: 423 GNMLVMEQENVKRVQLAETYL 417

BLAST of CmaCh08G005740 vs. TAIR 10
Match: AT2G39730.3 (rubisco activase )

HSP 1 Score: 313.2 bits (801), Expect = 3.5e-85
Identity = 161/321 (50.16%), Postives = 215/321 (66.98%), Query Frame = 0

Query: 119 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 178
           + +++   +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+   
Sbjct: 123 NLDNMMDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGIWGGKGQGKSFQCELVMAK 182

Query: 179 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQVRNFTTYSLDINNIRRKVEKG 238
           MG+ P++MSAGELES  AGEP KLIR+RYR A+ +                     ++KG
Sbjct: 183 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADL---------------------IKKG 242

Query: 239 KLSCLMINDIDAGIGRF-GNTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIP 298
           K+ CL IND+DAG GR  G TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+P
Sbjct: 243 KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEE-NARVP 302

Query: 299 IILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPN 358
           II TGNDFST+YAPLIRDGRMEKFYW P RED + +   ++  D I    ++ +V+ FP 
Sbjct: 303 IICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPG 362

Query: 359 QALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEA 418
           Q++DF+GALR+R YD  + K+V+ + G+EK+G++L+  R  E  P F  PE T + L+E 
Sbjct: 363 QSIDFFGALRARVYDDEVRKFVESL-GVEKIGKRLVNSR--EGPPVFEQPEMTYEKLMEY 417

Query: 419 GYSLVKEQQFVMETKLSKEYM 439
           G  LV EQ+ V   +L++ Y+
Sbjct: 423 GNMLVMEQENVKRVQLAETYL 417

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P934311.7e-8952.01Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sat... [more]
O490745.6e-8843.75Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum p... [more]
Q9ZT007.3e-8848.73Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays ... [more]
Q7X9992.8e-8747.74Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea ... [more]
Q405653.6e-8744.34Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotia... [more]
Match NameE-valueIdentityDescription
AT1G73110.12.1e-17574.56P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT2G39730.13.5e-8550.16rubisco activase [more]
AT2G39730.23.5e-8550.16rubisco activase [more]
AT2G39730.33.5e-8550.16rubisco activase [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.1070coord: 326..441
e-value: 3.0E-39
score: 135.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..62
NoneNo IPR availablePANTHERPTHR32429:SF11OSJNBA0011F23.7 PROTEINcoord: 236..443
coord: 28..219
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 120..325
e-value: 1.1E-29
score: 105.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 150..345
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 160..322
e-value: 4.5E-9
score: 36.8
IPR044960Ribulose bisphosphate carboxylase/oxygenase activase-likePANTHERPTHR32429FAMILY NOT NAMEDcoord: 236..443
coord: 28..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G005740.1CmaCh08G005740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity