CmaCh08G005400 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGACTTAGCTCTGAAACGAGCTCCTAGAAGACCTGAGCAGCTCAACAGAGAGGCGCGCAGTACGGCAGAAGAGCGGCGGCGACAAGAAGAAGATTGCTCTGCTAAGATGCCATTAATGGATACAACAGCGACCACTCTTAGAACATTGCACCCATTTTCCCCCTTTCTACTACGCTCATCGACGTCTCATCGTCTTCTTCGCGCTCGCTGCTTCTCCCATTTCAGCCACAAACACCGTCATCCGTGTTCTTCCTCCTCTCGCCGCCTCCTCCCCTTCTGCTCCTTCTGTAAGTTCGTATCTGTTGTAATTGAATTGAATGTTCTTATACCCTTTTGATTCTTAGTTTCTGCTGTGAATTGGGTTTGATTTGGTAATGGCGCAGCTGAAAAAGGGGAGGGTTCATCCGGTTCTCTGCCGCGCGGTGTTGGTGAGGCCCTAAATGGGGTTTCGCAGCAGAAGGTTCTTCAAGTTGTGTTGGTTTCTCCCCTGGTAATTATGAAGCATATAACGAGTGCCCTTGTTCATAATACTCCAAAGTGCTTACCTGATTCTTCAACTCTTCTTGCCCTGTGGGACGAGTGCCTCTGAATTATTAGATATCTCTTCCTAGATTCTTGATGTTCTTTGAATCACTGTTCTTCATTATTACTTAAAACTTCACGACGGTTGGTAGGAGAACGAAACACCCCTTATAATAGTGTAGAAACCTCTTTCTAACCGACGCTTTTTAAAAACATTGAGAGTAAGCCCAAAAAGAATAGCCTAAAGAGGACCATATCTGCTAGCTCCTAAAGAGGACAATATCTGCTAGCCTTGAACGGTTCATTTGTTGATATTCCCATTGGTCTTCTGTTTGAAAGCTAAGGGAACTTTTAGTTTGTTGTTTACATCTCTGGTGTGGGAAATCTTGATGGTAAGCTGGAAATCTTAGGGGGTATTATTGGATGATTGACAAGTTAGAATTAGTCGAGGTGCGACTAATTGGGATTGACAAAGGCTGTTTAGTGTCACGGTTATGCTCGTTTAAGGTGTGTTGTCATGGCCACATGTTGATGTCATGTCAAACCCTTTATTTGATTTCATGTTGTATTACCTTACTATTGTATTTTTTGTTTGTATGACTGCGAAATCATATCTAGGTCTTCTAGACCTGAATCTCAAAATGTACTAGAGGGGTATCTGACTAGTCGTCGACTCCTCCCATCCAAATGTTGTATGACTATTCGGTGAAATCATGTATAAGTTTGTCAAACATGAATCGCCTCAAAATGTACTATAGGGGATGTAACAAATCGTACTCGTAATTATATGTTATCTAAGTCGTTGTATTGTCTCTTCTTTCAATCTTGTTTTTAAACTCTCTTTAAAAAATCTCTTTGCTCCCGTTTTCTAAAACCTTTTTTTCAAAATGGGGTATGAATTGGCTTGACTCATTCGGTGCTGGAAGGGAGTGTCGCACACTATCAAGAAAAGTGAGATTGTGAAGCTTGGCAACTTCTTCTTCAAGTTGAGATGTGAGGGTCGAGGAAACGATGTCTGGTAGAAATAACAATCGGTCATATTTTTGTTGTTGATGTGATATCAGAACTAATTCATCTTGTGATGTTAATCATAAACTTTTGTTTTGACTGTGAACTCTGAATTGGGTTGCAGACAACCTCAATTCTTCAAGGCTGGCTCTTAGATTTCTGTTGTCCATGACAGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTTGGACTACATCTAGTTGGGGTTAGTTTCAAAACATCGCTACTTCGAGTGCAATCGTTCTAATTTTTCCCCTCTTAGCTGGAGATCACCAAAAACTTACCTGCTCGTATCGTTTGTTTCTATGTCTTTCGTTTTCAGCCATTGGGATTTAAGGTGGACGACACGAAGCTAAAGCGTGCTGGTTTGGATTACTGGCCGTATCCCATAGGAATTCAAGTTCTTTGAATACTAGGAATACTAGATTTATTTTCGATTTTGAACTGAGATTTGTTAAACCGATATCACTGTACATATGGTTCGATGTTTTCAAGTTTTAACATCATGTTTTAGATACGTCGTCGTTAAAATTCATAACACGTGGGCAGAGTTTCGAGACTACTTCAAAAAACAGGTAGTTTTTGTTCATGTATCAGAGAAAATGTGCACAAAACTCCATTTTCTTGATGATTGTTCTTGTCGATGTACAGGAAGGAGAAAAACGGCTGCTAGCATTTACAAAGAGAGGGACTACACTCCACTCGGCGAGTGCCCATTTCTTTGATCTTTTTCTGTCTATAATCAGGGAAGGAGAGATTTTGAGTAACAAGGATTGTTTTCTCTTTTCATTTCTGCAGGATTTTTCGTACAAGCAGGGCGATTACTTGTTGTTCAGGTCGGAAACTAGTGGGTTACCAGCTGAAGCTCTTGAGGATTGCAAGAACCAGGCATTTGGTGGGGGGACCTTAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTAAATCTTTCTGTAAGTGTTGGCATTGCTATATATGAAGCTTCACGACAACTAAATTACCAGCAACTTCAGATTGAACCAGAGGGTTGTACCAACAACAATGAACAGTCTATCATTACAGAGGATCTTTTTGCTTGATTCTTTGATATGAACTTTTGCACCATTTTCAATTGATTTGAACACAGCAAAGAAGCTCATGAAAGATAGTAGACACATTGCTTACCCTACCTATGGTCTTAAAAGTTCATTTATTAGTCTTACTCTGCAGTGCCATCCCG CGACTTAGCTCTGAAACGAGCTCCTAGAAGACCTGAGCAGCTCAACAGAGAGGCGCGCAGTACGGCAGAAGAGCGGCGGCGACAAGAAGAAGATTGCTCTGCTAAGATGCCATTAATGGATACAACAGCGACCACTCTTAGAACATTGCACCCATTTTCCCCCTTTCTACTACGCTCATCGACGTCTCATCGTCTTCTTCGCGCTCGCTGCTTCTCCCATTTCAGCCACAAACACCGTCATCCGTGTTCTTCCTCCTCTCGCCGCCTCCTCCCCTTCTGCTCCTTCTCTGAAAAAGGGGAGGGTTCATCCGGTTCTCTGCCGCGCGGTGTTGGTGAGGCCCTAAATGGGGTTTCGCAGCAGAAGGTTCTTCAAGTTGTGTTGGTTTCTCCCCTGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTTGGACTACATCTAGTTGGGCCATTGGGATTTAAGGTGGACGACACGAAGCTAAAGCGTGCTGGTTTGGATTACTGGCCATACGTCGTCGTTAAAATTCATAACACGTGGGCAGAGTTTCGAGACTACTTCAAAAAACAGGAAGGAGAAAAACGGCTGCTAGCATTTACAAAGAGAGGGACTACACTCCACTCGGATTTTTCGTACAAGCAGGGCGATTACTTGTTGTTCAGGTCGGAAACTAGTGGGTTACCAGCTGAAGCTCTTGAGGATTGCAAGAACCAGGCATTTGGTGGGGGGACCTTAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTAAATCTTTCTGTAAGTGTTGGCATTGCTATATATGAAGCTTCACGACAACTAAATTACCAGCAACTTCAGATTGAACCAGAGGGTTGTACCAACAACAATGAACAGTCTATCATTACAGAGGATCTTTTTGCTTGATTCTTTGATATGAACTTTTGCACCATTTTCAATTGATTTGAACACAGCAAAGAAGCTCATGAAAGATAGTAGACACATTGCTTACCCTACCTATGGTCTTAAAAGTTCATTTATTAGTCTTACTCTGCAGTGCCATCCCG ATGCCATTAATGGATACAACAGCGACCACTCTTAGAACATTGCACCCATTTTCCCCCTTTCTACTACGCTCATCGACGTCTCATCGTCTTCTTCGCGCTCGCTGCTTCTCCCATTTCAGCCACAAACACCGTCATCCGTGTTCTTCCTCCTCTCGCCGCCTCCTCCCCTTCTGCTCCTTCTCTGAAAAAGGGGAGGGTTCATCCGGTTCTCTGCCGCGCGGTGTTGGTGAGGCCCTAAATGGGGTTTCGCAGCAGAAGGTTCTTCAAGTTGTGTTGGTTTCTCCCCTGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTTGGACTACATCTAGTTGGGCCATTGGGATTTAAGGTGGACGACACGAAGCTAAAGCGTGCTGGTTTGGATTACTGGCCATACGTCGTCGTTAAAATTCATAACACGTGGGCAGAGTTTCGAGACTACTTCAAAAAACAGGAAGGAGAAAAACGGCTGCTAGCATTTACAAAGAGAGGGACTACACTCCACTCGGATTTTTCGTACAAGCAGGGCGATTACTTGTTGTTCAGGTCGGAAACTAGTGGGTTACCAGCTGAAGCTCTTGAGGATTGCAAGAACCAGGCATTTGGTGGGGGGACCTTAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTAAATCTTTCTGTAAGTGTTGGCATTGCTATATATGAAGCTTCACGACAACTAAATTACCAGCAACTTCAGATTGAACCAGAGGGTTGTACCAACAACAATGAACAGTCTATCATTACAGAGGATCTTTTTGCTTGA MPLMDTTATTLRTLHPFSPFLLRSSTSHRLLRARCFSHFSHKHRHPCSSSSRRLLPFCSFSEKGEGSSGSLPRGVGEALNGVSQQKVLQVVLVSPLIPGNTGSIARTCAASAVGLHLVGPLGFKVDDTKLKRAGLDYWPYVVVKIHNTWAEFRDYFKKQEGEKRLLAFTKRGTTLHSDFSYKQGDYLLFRSETSGLPAEALEDCKNQAFGGGTLRIPMVETYVRCLNLSVSVGIAIYEASRQLNYQQLQIEPEGCTNNNEQSIITEDLFA Homology
BLAST of CmaCh08G005400 vs. ExPASy Swiss-Prot
Match: P74516 (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0992 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.4e-33 Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 0
BLAST of CmaCh08G005400 vs. ExPASy Swiss-Prot
Match: O31590 (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Bacillus subtilis (strain 168) OX=224308 GN=cspR PE=3 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29 Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 0
BLAST of CmaCh08G005400 vs. ExPASy Swiss-Prot
Match: P0AGJ8 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=trmL PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28 Identity = 70/159 (44.03%), Postives = 94/159 (59.12%), Query Frame = 0
BLAST of CmaCh08G005400 vs. ExPASy Swiss-Prot
Match: P0AGJ7 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=trmL PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28 Identity = 70/159 (44.03%), Postives = 94/159 (59.12%), Query Frame = 0
BLAST of CmaCh08G005400 vs. ExPASy Swiss-Prot
Match: Q74Y93 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Yersinia pestis OX=632 GN=trmL PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.3e-28 Identity = 73/160 (45.62%), Postives = 94/160 (58.75%), Query Frame = 0
BLAST of CmaCh08G005400 vs. TAIR 10
Match: AT5G26880.2 (AGAMOUS-like 26 ) HSP 1 Score: 312.4 bits (799), Expect = 3.6e-85 Identity = 161/256 (62.89%), Postives = 197/256 (76.95%), Query Frame = 0
BLAST of CmaCh08G005400 vs. TAIR 10
Match: AT5G26880.1 (AGAMOUS-like 26 ) HSP 1 Score: 259.6 bits (662), Expect = 2.8e-69 Identity = 135/216 (62.50%), Postives = 163/216 (75.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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