CmaCh08G004390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G004390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ankyrin repeat protein
Location	Cma_Chr08: 2479054 .. 2480238 (-)
RNA-Seq Expression	CmaCh08G004390
Synteny	CmaCh08G004390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGGTGAGAGGTTTTAATATCGTCCACGCCCTTTTCTTAGTTCTTGCTTGGGAGTGTTGTGCGAGGTTGGGTGCCACTTTCAACGATGTCACTGGTGTTATAGGTCAAGGCCGAAACCATCGGTTTTCTTTCCGTTCATTTGGTGATCATTATATTGGAATCTCGAAATTCGACCATACCGCCATCCAGAGTTCAGAAGTGAGTGTCGACGACAAAGCTTCATCTTTTCGTAATGAAATTAAGAAAGGTGGCGCTGCATTTGTTGGTCGTGAAGTACCAAAGATCAATGGCGGTGGTGGGTTTTCTAAGGGTCATGAAATTATTAGGAAGAGGGGTGGAAACATTGTTTATTCTTATGGTGGAAAAATTCTTCCTGTTGGTTTGAAGAGAAGTGGCAATGGTGGAGAAACCAGCTCCAAGGAGCTGGGAGCTGATGTTTTGGATGGCAGCAACATTCGTTTGAAAAGTAGTGCCAATGTTGTCGACAGCAGCTCCAAAGATCTGGGAGCTGCTGATTTGGATGGTGGAAAGATTGATTTGAAGAGTAGTGGCAATGATGTGGGTTCTCATAGTGGAGGAATCAGCTCCAATAATCTGGGAGCTGCTGCTTCGGATGGTGGACACATCAGCTTCAATGATCTGGGAGCTGCTGCTTCGGATGGTGGACACACCAGCTCCAATGATCTGGGAGCTGCTGGTTCGGATGGTGGACACACCATCTCCAATGATCTTGGAGCTGCTGGTTCGGATGGTGGACACACCAGCTCCAATGATCTTGGAGCTGCTAATTCTGGAGGTGAAACCATTACCTTCAAGAGTAGTGTCAATATTGTTGGCTTTTATAGTGGAGAAATCAGCCCCAATGAACTGGGAGCTGCTGTTTCAGATGGTGGAAACATCAACTCCAATGATCTGGGAGCTGCTGATTCTGATGGTGTCGGCTCTCATAGTGGAGAAATCAGCTCCAATGAACTGGGAGCTGCTGGTTCGGATGGTGGCAACGTTAGTTTAAATAACAGTGGCAATATCATTGCTCCTCGTAGTGGAGAATTCAGTTCGAAGAACAACGAAAGTGTTGTCTCAAATGGTGGCAAAATTGGTTTGAAGTCGGTTGCCAATGTCGAGTCTCATGGCCTTGCAACTACGACCAGTAATGGCACTGTGGCTGCTACTCAGTGA

mRNA sequence

ATGGCAGCGGTGAGAGGTTTTAATATCGTCCACGCCCTTTTCTTAGTTCTTGCTTGGGAGTGTTGTGCGAGGTTGGGTGCCACTTTCAACGATGTCACTGGTGTTATAGGTCAAGGCCGAAACCATCGGTTTTCTTTCCGTTCATTTGGTGATCATTATATTGGAATCTCGAAATTCGACCATACCGCCATCCAGAGTTCAGAAGTGAGTGTCGACGACAAAGCTTCATCTTTTCGTAATGAAATTAAGAAAGGTGGCGCTGCATTTGTTGGTCGTGAAGTACCAAAGATCAATGGCGGTGGTGGGTTTTCTAAGGGTCATGAAATTATTAGGAAGAGGGGTGGAAACATTGTTTATTCTTATGGTGGAAAAATTCTTCCTGTTGGTTTGAAGAGAAGTGGCAATGGTGGAGAAACCAGCTCCAAGGAGCTGGGAGCTGATGTTTTGGATGGCAGCAACATTCGTTTGAAAAGTAGTGCCAATGTTGTCGACAGCAGCTCCAAAGATCTGGGAGCTGCTGATTTGGATGGTGGAAAGATTGATTTGAAGAGTAGTGGCAATGATGTGGGTTCTCATAGTGGAGGAATCAGCTCCAATAATCTGGGAGCTGCTGCTTCGGATGGTGGACACATCAGCTTCAATGATCTGGGAGCTGCTGCTTCGGATGGTGGACACACCAGCTCCAATGATCTGGGAGCTGCTGGTTCGGATGGTGGACACACCATCTCCAATGATCTTGGAGCTGCTGGTTCGGATGGTGGACACACCAGCTCCAATGATCTTGGAGCTGCTAATTCTGGAGGTGAAACCATTACCTTCAAGAGTAGTGTCAATATTGTTGGCTTTTATAGTGGAGAAATCAGCCCCAATGAACTGGGAGCTGCTGTTTCAGATGGTGGAAACATCAACTCCAATGATCTGGGAGCTGCTGATTCTGATGGTGTCGGCTCTCATAGTGGAGAAATCAGCTCCAATGAACTGGGAGCTGCTGGTTCGGATGGTGGCAACGTTAGTTTAAATAACAGTGGCAATATCATTGCTCCTCGTAGTGGAGAATTCAGTTCGAAGAACAACGAAAGTGTTGTCTCAAATGGTGGCAAAATTGGTTTGAAGTCGGTTGCCAATGTCGAGTCTCATGGCCTTGCAACTACGACCAGTAATGGCACTGTGGCTGCTACTCAGTGA

Coding sequence (CDS)

ATGGCAGCGGTGAGAGGTTTTAATATCGTCCACGCCCTTTTCTTAGTTCTTGCTTGGGAGTGTTGTGCGAGGTTGGGTGCCACTTTCAACGATGTCACTGGTGTTATAGGTCAAGGCCGAAACCATCGGTTTTCTTTCCGTTCATTTGGTGATCATTATATTGGAATCTCGAAATTCGACCATACCGCCATCCAGAGTTCAGAAGTGAGTGTCGACGACAAAGCTTCATCTTTTCGTAATGAAATTAAGAAAGGTGGCGCTGCATTTGTTGGTCGTGAAGTACCAAAGATCAATGGCGGTGGTGGGTTTTCTAAGGGTCATGAAATTATTAGGAAGAGGGGTGGAAACATTGTTTATTCTTATGGTGGAAAAATTCTTCCTGTTGGTTTGAAGAGAAGTGGCAATGGTGGAGAAACCAGCTCCAAGGAGCTGGGAGCTGATGTTTTGGATGGCAGCAACATTCGTTTGAAAAGTAGTGCCAATGTTGTCGACAGCAGCTCCAAAGATCTGGGAGCTGCTGATTTGGATGGTGGAAAGATTGATTTGAAGAGTAGTGGCAATGATGTGGGTTCTCATAGTGGAGGAATCAGCTCCAATAATCTGGGAGCTGCTGCTTCGGATGGTGGACACATCAGCTTCAATGATCTGGGAGCTGCTGCTTCGGATGGTGGACACACCAGCTCCAATGATCTGGGAGCTGCTGGTTCGGATGGTGGACACACCATCTCCAATGATCTTGGAGCTGCTGGTTCGGATGGTGGACACACCAGCTCCAATGATCTTGGAGCTGCTAATTCTGGAGGTGAAACCATTACCTTCAAGAGTAGTGTCAATATTGTTGGCTTTTATAGTGGAGAAATCAGCCCCAATGAACTGGGAGCTGCTGTTTCAGATGGTGGAAACATCAACTCCAATGATCTGGGAGCTGCTGATTCTGATGGTGTCGGCTCTCATAGTGGAGAAATCAGCTCCAATGAACTGGGAGCTGCTGGTTCGGATGGTGGCAACGTTAGTTTAAATAACAGTGGCAATATCATTGCTCCTCGTAGTGGAGAATTCAGTTCGAAGAACAACGAAAGTGTTGTCTCAAATGGTGGCAAAATTGGTTTGAAGTCGGTTGCCAATGTCGAGTCTCATGGCCTTGCAACTACGACCAGTAATGGCACTGTGGCTGCTACTCAGTGA

Protein sequence

MAAVRGFNIVHALFLVLAWECCARLGATFNDVTGVIGQGRNHRFSFRSFGDHYIGISKFDHTAIQSSEVSVDDKASSFRNEIKKGGAAFVGREVPKINGGGGFSKGHEIIRKRGGNIVYSYGGKILPVGLKRSGNGGETSSKELGADVLDGSNIRLKSSANVVDSSSKDLGAADLDGGKIDLKSSGNDVGSHSGGISSNNLGAAASDGGHISFNDLGAAASDGGHTSSNDLGAAGSDGGHTISNDLGAAGSDGGHTSSNDLGAANSGGETITFKSSVNIVGFYSGEISPNELGAAVSDGGNINSNDLGAADSDGVGSHSGEISSNELGAAGSDGGNVSLNNSGNIIAPRSGEFSSKNNESVVSNGGKIGLKSVANVESHGLATTTSNGTVAATQ

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh08G004390 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh08G004390 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G004390.1	CmaCh08G004390.1	mRNA