CmaCh08G004370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G004370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein FAM186A-like
Location	Cma_Chr08: 2472282 .. 2476054 (-)
RNA-Seq Expression	CmaCh08G004370
Synteny	CmaCh08G004370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGTTTCAAGCTCTTTCACACCCTTTTCTTATTGATGGCTTTGCAATGTTGTGCGAAGGTGGGTGCCACTTTTGGTGATGTCACTGGTGACGTCAATCTCGACAGTCAATTTTCATTTCGTGCATTTGGATTACATGACACACAAGCCCCAACTATTGCTCCAATTGGAAGTAGCACACAAGTCTCAGCGGCTACATCAGTTGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGTTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCGGAGGGGGATACGTCGGGCGCTGAAACCCCCGAGGGGGCTCCTCCGTCGGTCGGAAGCGCAGCTGAAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACNGAAGCGCTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGTAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAGACCCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGANNGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCATCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGAGCTGCGTCGGTCGGAAGCATTGCTGAAACCCCAAAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGTGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGAAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGGCCGAAAGCATTGCTGAAACCCAAGACCCGACAGAAGTTGAANGCATTGGAGGTTTCTTTGGCTAATAACAAGGCAAAACCTAGCCAAACTCATTATTTTGTAAACAAATTCATTATTTCTATATATTTTTTTTCTTAAACGGAATGATTTTCCTATATTTTCTCATATTTAATTTTCTATCTTAATTCATGAGTATGAGATAATATTACTTATATTCTAAGTAGGCCTTTATTAATTGCACAATGAAGGGTGAGTTGGCGAGTTCTCTACCGTCCCTATATGGTAACAACATCATACTATGGGCTAACAACATCATACTGTATGATATTGATTACATTATCTAATGCACAACCTAAACCCTAACTTGACATGGTATCTAGCATATCCTATTTGTAAATCAGACAATATAATAGTTTCTCATGGTCCCAAAACTACGAAGCATTGCTCAAACCCAAACCTCCTAAATTCCAGAGGGTGCAACAGTAACACACCTTTTATCTACGAAAGTACCATGGATAGCTTATTAGGGCTTAAACAACACAACAATTAGTCATCCATAGATGTCATAAAGGTTATCTAGGTTTTTAGAGAGTCTAGGCAGCTTAAATCTCATCTCACATTCAGGACATTTGAGACTATCATACTTTGCTTTCTAGGAGCACTAAGGTCTTGATCATTGATTGTCACTCACGATCCTAGAGTGCTCGATCTACGACCTAGGTCAATGTGGAACTACCCCAACTCAAGCACCCTAAACTTAACTTGGTTCATTTATGCATGCTTGGTTAAAGAGATAATTTTATTGATCACCTAAAGCACGGAATTCATAATTTAATCAATCATGCAAGCTAAATAGGGAGAAAACATTCATCAATCACTCGGGAGCACATATCCCAATATCGTATCCTCCTTTCTAGCACAACATAGAGAAAACTTAATAGGTAGCACAACATGCATCATAAAAATATTAACATAGGGGTATTTTTGTAATTTTTCATAATTCTATCACGGAATTCACAATCTAATCAATCATGCAAGCTTAATAGATAGAAAACCTCCATTAATATTGAGAGCACAATCCCAACATTGTATCCTCCTTTCTAGCACGTCAGAGAATTAAAAACAACATGCATCATAAAAATATTAACATAGGGGTATTTTCGTAATTTTTCATAGCATATATTGTATTATGATCCAAAATTATCCCAGCGATCCCTATAATTAATTCTTGATCCAAAAAAGTCTAAATGGCTAATTACTTGGACGACCTACTTCTACAACAATATTATATAACAATATTGACTTTATTATATAAAATAATAATCAATTTATTACATATCAAAGCAAGAGAGGTTAGCAATTATATGTTTTTGTTTAAAATTATTATTACTATTTTACCAAAAAAAATAATAATGATAAGAAAATAATAGATTCAAAGTTTTATTGAAAATTCTAAGTAAAAATATGAACATAAACTAAAATGGAATGAGCCTAAAAAAATATCAATTTAATTTTTTACAAATAAACTTATTAGATAATAAAAAATAATTATAATTTATATCCCTAATAATTGAGTTGGAATGCATATTAAATATTAAATCTATATTTAGGGTTAAATATACAGTCAAACCTTCTATATTTAGAATACTCTAAAATACACCAAATTTGCAAGCCTCTCTAAATTGGTTGGTCTTTTCTAAATATAGTTGCCCATTAAACTATATATATATAGTTTCCCATTATCAGAAATATTCAAACACCCACATCTTCATCCTTGCTAATAATCATCATTTGTGAAACGAGTTTGTGACTCTACAACTTAGACAGTTCACCATGGCCACCGCGAAAGGTTTTGATTTCTTTCACGCCCTTTTCTTGGTGATTGCTTTGCAATGTTGTGTGAAGGTAGGTGCCACTTTTGGCGATGTCACTGGTGATGTCAATGTTGATCGTCCATTTTCATATCATACATTTGGAACACAAGTCCCAGCAGCTGCACCTTCTGAGGGTGCTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGTGTTGCATCGGGTGGGAGCATTGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGGGTTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGGACTGTGCCAGTTGGGAGCATCGCTGAGACTCCGGAGGGGGCTGCGCCAGTTGGGAGCAACGCTCAAACCCCAACGAGTAAACCAATTGAAAGTAGCACAGAAGCCCCCACACCAATTGGGAGCAGTTGA

mRNA sequence

ATGGCGAAAGGTTTCAAGCTCTTTCACACCCTTTTCTTATTGATGGCTTTGCAATGTTGTGCGAAGGTGGGTGCCACTTTTGGTGATGTCACTGGTGACGTCAATCTCGACAGTCAATTTTCATTTCGTGCATTTGGATTACATGACACACAAGCCCCAACTATTGCTCCAATTGGAAGTAGCACACAAGTCTCAGCGGCTACATCAGTTGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGTTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCGGAGGGGGATACGTCGGGCGCTGAAACCCCCGAGGGGGCTCCTCCGTCGGTCGGAAGCGCAGCTGAAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACNGAAGCGCTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGTAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAGACCCCGGAGGGGGCTGCCATTGCTGAAACCCCGGAGGGGGCTGCATCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGAGCTGCGTCGGTCGGAAGCATTGCTGAAACCCCAAAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGTGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGAAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGGCCGAAAGCATTGCTGAAACCCAAGACCCGACAGAAGTTGAANGCATTGGAGGTGCCACTTTTGGCGATGTCACTGGTGATGTCAATGTTGATCGTCCATTTTCATATCATACATTTGGAACACAAGTCCCAGCAGCTGCACCTTCTGAGGGTGCTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGTGTTGCATCGGGTGGGAGCATTGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGGGTTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGGACTGTGCCAGTTGGGAGCATCGCTGAGACTCCGGAGGGGGCTGCGCCAGTTGGGAGCAACGCTCAAACCCCAACGAGTAAACCAATTGAAAGTAGCACAGAAGCCCCCACACCAATTGGGAGCAGTTGA

Coding sequence (CDS)

ATGGCGAAAGGTTTCAAGCTCTTTCACACCCTTTTCTTATTGATGGCTTTGCAATGTTGTGCGAAGGTGGGTGCCACTTTTGGTGATGTCACTGGTGACGTCAATCTCGACAGTCAATTTTCATTTCGTGCATTTGGATTACATGACACACAAGCCCCAACTATTGCTCCAATTGGAAGTAGCACACAAGTCTCAGCGGCTACATCAGTTGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGTTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCGGAGGGGGATACGTCGGGCGCTGAAACCCCCGAGGGGGCTCCTCCGTCGGTCGGAAGCGCAGCTGAAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGTTGAAACCCCGGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGGGGATACATCGGTCGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACGGAAGCGCTGCTGAAACCCCAGAGGAGGATACGTCGGACNGAAGCGCTGCTGAAACCCCGAAAGAGGATACGTCGGTCGGAAGCGCTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGAAACCCCCGAGGGGGATACGTCGGTCGGAAGCACTGCTGTAACCCCCGAGGGGGCTCCGTCGGCCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACGCCGGAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAGACCCCGGAGGGGGCTGCCATTGCTGAAACCCCGGAGGGGGCTGCATCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGAGCTGCGTCGGTCGGAAGCATTGCTGAAACCCCAAAGGGGGCTGCGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGTGTCGGCCGGAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGATCTCGGCCGAAAGCATTGCTGAAACCCCGGAGGGGGCTGCGTCGGCCGAAAGCATTGCTGAAACCCAAGACCCGACAGAAGTTGAANGCATTGGAGGTGCCACTTTTGGCGATGTCACTGGTGATGTCAATGTTGATCGTCCATTTTCATATCATACATTTGGAACACAAGTCCCAGCAGCTGCACCTTCTGAGGGTGCTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGTGTTGCATCGGGTGGGAGCATTGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGTGCTGCGTCCAGTGGGAGCATCGCTGAGACTCCAGAGGGGGTTGCGTCGGGTGGGAGCATCGCTGAGACTCCGGAGGGGACTGTGCCAGTTGGGAGCATCGCTGAGACTCCGGAGGGGGCTGCGCCAGTTGGGAGCAACGCTCAAACCCCAACGAGTAAACCAATTGAAAGTAGCACAGAAGCCCCCACACCAATTGGGAGCAGTTGA

Protein sequence

MAKGFKLFHTLFLLMALQCCAKVGATFGDVTGDVNLDSQFSFRAFGLHDTQAPTIAPIGSSTQVSAATSVGSIVETPEGDTSVGSVAETPKEDTSVGSAAETPEGDTSGAETPEGAPPSVGSAAETPEGAPSASAGSIVETPEGDTSVGSAAETPEGDTSVGSAAETPEEDTSDGSAAETPEEDTSDXSAAETPKEDTSVGSAAETPEGDTSVGSTAETPEGDTSVGSTAETPEGDTSVGSTAETPEGDTSVGSTAVTPEGAPSASAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASAGSIAETPEGAAIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASISAGSIAETPEGAASVGSIAETPKGAASAGSIAETPEGAVSAGSIAETPEGAASISAESIAETPEGAASAESIAETQDPTEVEXIGGATFGDVTGDVNVDRPFSYHTFGTQVPAAAPSEGAASGGSIAETPEGVASGGSIAETPEGAASSGSIAETPEGAASSGSIAETPEGVASGGSIAETPEGTVPVGSIAETPEGAAPVGSNAQTPTSKPIESSTEAPTPIGSS

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh08G004370 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh08G004370 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 532..552
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..616
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..616
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G004370.1	CmaCh08G004370.1	mRNA