CmaCh08G004300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G004300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein of unknown function, DUF538
Location	Cma_Chr08: 2446241 .. 2448898 (-)
RNA-Seq Expression	CmaCh08G004300
Synteny	CmaCh08G004300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCTCTAAGTCTGTGGTTCCTTTTCTTCTCCTTGCTTTCATCTCATTGTCGTCGAGCCCTCTCGCCTGTGCTCAAAAATCTCTCTCCGCCTACGATATTCTCCAGCAGTACGGCTTCCCTGTCGGCATTCTTCCCGTCGGTGTTACTGGCTACGAATTCAACAAAGCCACCGGAGAGTTCAGCCTCTTTTTGAATCGGAAGTGCAGATTCTGGATCGATTCCTACGAATTGGAGTACAAACCTACCGTCAAGGGCGTGATTTCTCAAGGCATAATCAAAAATTTGAAAGGTGTTAGTGTTAAGATCCTGTTGATTTGGTTCAACATCGTTGAAGTCGTTAGCGATAGTGACGAACTTCGATTCTCTATCGGAGTTGCCTCTGCTAATTTTCCGATTAATAGTTTCTATGAATCGCCGCATTGTGGATGTGGATTTGACTGCGACAAGGTTGGGAGCTTGGTTTCGGCTTCTTGAAATTTGGTAATATATGTGTTTAATGATTTATGGAATGTTTTGTTTTGAATCTCTTTGACCACTTCAAATATAGCGATGTTTTGTTGCTTTGAACTTACATTTAAGTGCAGTTTAGGTGATCGAGATTACCTCTATCTATTGTTCTGTTCTACTTTTGTTGAAATAATCGTCTCTTCGGTGGAAAATAGAATTGTATTTTTCTGCCATTGTGATCTGCTGCCTCTCTCTGATTCTCTTCATGCATTCGATTGCTTATTTTTTATTTGAACAATTCAATCTATTAGGTTTAATGGTTGCACATTTTTAATCATCTATGGCATCAATCGCATAATCAGTTTGTCTGAAACCCTAGATTCTTATCTTCATCAGTCGGCTTCCGTTTACTGGCTTCTTTTTCATACTCTGCCTACTTTTCAGTTCGTCAATCAGATGATATTCCGCCTTTTTTTCATTGGCAGCCTCTCCCTCAGGTTTCATTTTCTCACTGAGGCCTATTGTTCAATTGGTCAATTATGAGTCAGTTAGATCATATTCCTTTTGTTTTTCCATTGGCATTCGTTTCCTGTCTGTTAGCTAGTTCCCAGATCTTGAAAAATATGCCTTGTTGTTGGTCATAGTCTGCCTTTGAACTGTTTAGTACTGCCACCATAATGGGAGAAGGTACAGTTCTAGAATCAATTCTTATCCATCTGGATTGTTCATTTCAAGTTCTTTTAGACCATTGTTCTTGGTTCCTTTTTCACATAATCTGGAACTCCCAGAGTGAAAACATACTTTTTGGGATCCTGTCTTTTTTAGAAAGAAAGTCTGACCCCACTTCCAACCCAGATTGTGGAGACATCAGGAGTTTCCTTTGAACAACCAATTGGAGGTTGATTCTTGGGATCTTGTTAGAGACCCACCATCCCTACCCCCTTGGGGGCTGATTCTTGGGATCTTGTTAGGTGATGTAAAATTCTAAGACCACCATATCAGCTGGTAGGATCTGTTCTGAATGGGAGGGACTAATTTAGGGAATAGTCATGGATTTATAAGTAAGAATACATCTCCAATGGTACGAGATCTTTTGGTAAAACAAAAAGAAAAGTCATGCAAGTTGTGCTCAAAGTGGATAATATCATATCATTTTGTAGAACCGTGATTTTAATAGGATCTCTGTATCAGAGTGTACTCTTCGTTTTTAATCATAGATATCATGAAGAAGAGAAGCTCATGTTGGAGTTCAATCTTCAGCCACTGTTTGCACTACCAAATTCTTTTTGGTGAATTGATCCAAAGTTCGAATTCTTAGGCAAAATAGCTTGATTTGAATTTCTTGGTAAGTTCATCGAATGGAAACTTGGGGGAATTTTGGAATTCAATGTTTGTATGATCTGCTCTTGGAAATGACCACCATTCTATGAGTTGCACGTGTTTGATTAGCATGTCCTTAGTTCTCGTAAACCTATTTTTTTGCTGCTACCCTCTATTTCTGTGTTCTTAAATTTAGAATCTTCCCAGTCAGCCATAGCATTTCCACATCAATTTTCCAGGAAAATGGTGGGATAAAAATTTTCTCAGCGGGAAAGAGGGAGAGATGGGAGACCCTATTTTTAGAACAACCAAGGAAAAGAAACAACTATTTTTCCCCCCTCAATGGTCTCGTTGCCACAGCATTAGCATTAGCATTAGCCTCAACCTCAGCCTCCCCTGCCCACATTCTTCCACATCTCCATGTCGACCGCCGCTGCATCGCCTGCCACCAACAACGGCGAAGCACCGTCGGTGTACGACATTCTCCGGGAATTCAACTTCCCAATAGGCCTCCTCCCAGAAGGTGTTGTGGGTTGTAGTCTTGATCGAACCACCGGAAAATTGGAGGCTTATTTGAATGAAGCATGCCAATTCTCGCCGGAAGATCCGTATGAATTGAGATACAAAGCCACCATTAGTGGGCAGATCTCAAAGAATAGGCTAACGGATCTGAAAGGGGTGACTGTGAAATTCATGTTCTTCTGGGTCAACATTGTGGAGGTGGTGAGAAACGGCGACGATCTGCTGTTCTCGGTGGGGGTGGCCACGGCGTCGTTTCCAGTGGATAATTTCTCCGAGTGCCTGCCGCCGGGTGGGTGTGGAGCCGATTGCAAGAATGGAAAAGGGGGAAAAATCAAAACCAAATCTCTTGTTTCACCAGCTTGA

mRNA sequence

ATGAGTTTCTCTAAGTCTGTGGTTCCTTTTCTTCTCCTTGCTTTCATCTCATTGTCGTCGAGCCCTCTCGCCTGTGCTCAAAAATCTCTCTCCGCCTACGATATTCTCCAGCAGTACGGCTTCCCTGTCGGCATTCTTCCCGTCGGTGTTACTGGCTACGAATTCAACAAAGCCACCGGAGAGTTCAGCCTCTTTTTGAATCGGAAGTGCAGATTCTGGATCGATTCCTACGAATTGGAGTACAAACCTACCGTCAAGGGCGTGATTTCTCAAGGCATAATCAAAAATTTGAAAGGTGTTAGTGTTAAGATCCTGTTGATTTGGTTCAACATCGTTGAAGTCGTTAGCGATAGTGACGAACTTCGATTCTCTATCGGAGTTGCCTCTGCTAATTTTCCGATTAATAGTTTCTATGAATCGCCGCATTGTGGATGTGGATTTGACTGCGACAAGCCTCAACCTCAGCCTCCCCTGCCCACATTCTTCCACATCTCCATGTCGACCGCCGCTGCATCGCCTGCCACCAACAACGGCGAAGCACCGTCGGTGTACGACATTCTCCGGGAATTCAACTTCCCAATAGGCCTCCTCCCAGAAGGTGTTGTGGGTTGTAGTCTTGATCGAACCACCGGAAAATTGGAGGCTTATTTGAATGAAGCATGCCAATTCTCGCCGGAAGATCCGTATGAATTGAGATACAAAGCCACCATTAGTGGGCAGATCTCAAAGAATAGGCTAACGGATCTGAAAGGGGTGACTGTGAAATTCATGTTCTTCTGGGTCAACATTGTGGAGGTGGTGAGAAACGGCGACGATCTGCTGTTCTCGGTGGGGGTGGCCACGGCGTCGTTTCCAGTGGATAATTTCTCCGAGTGCCTGCCGCCGGGTGGGTGTGGAGCCGATTGCAAGAATGGAAAAGGGGGAAAAATCAAAACCAAATCTCTTGTTTCACCAGCTTGA

Coding sequence (CDS)

ATGAGTTTCTCTAAGTCTGTGGTTCCTTTTCTTCTCCTTGCTTTCATCTCATTGTCGTCGAGCCCTCTCGCCTGTGCTCAAAAATCTCTCTCCGCCTACGATATTCTCCAGCAGTACGGCTTCCCTGTCGGCATTCTTCCCGTCGGTGTTACTGGCTACGAATTCAACAAAGCCACCGGAGAGTTCAGCCTCTTTTTGAATCGGAAGTGCAGATTCTGGATCGATTCCTACGAATTGGAGTACAAACCTACCGTCAAGGGCGTGATTTCTCAAGGCATAATCAAAAATTTGAAAGGTGTTAGTGTTAAGATCCTGTTGATTTGGTTCAACATCGTTGAAGTCGTTAGCGATAGTGACGAACTTCGATTCTCTATCGGAGTTGCCTCTGCTAATTTTCCGATTAATAGTTTCTATGAATCGCCGCATTGTGGATGTGGATTTGACTGCGACAAGCCTCAACCTCAGCCTCCCCTGCCCACATTCTTCCACATCTCCATGTCGACCGCCGCTGCATCGCCTGCCACCAACAACGGCGAAGCACCGTCGGTGTACGACATTCTCCGGGAATTCAACTTCCCAATAGGCCTCCTCCCAGAAGGTGTTGTGGGTTGTAGTCTTGATCGAACCACCGGAAAATTGGAGGCTTATTTGAATGAAGCATGCCAATTCTCGCCGGAAGATCCGTATGAATTGAGATACAAAGCCACCATTAGTGGGCAGATCTCAAAGAATAGGCTAACGGATCTGAAAGGGGTGACTGTGAAATTCATGTTCTTCTGGGTCAACATTGTGGAGGTGGTGAGAAACGGCGACGATCTGCTGTTCTCGGTGGGGGTGGCCACGGCGTCGTTTCCAGTGGATAATTTCTCCGAGTGCCTGCCGCCGGGTGGGTGTGGAGCCGATTGCAAGAATGGAAAAGGGGGAAAAATCAAAACCAAATCTCTTGTTTCACCAGCTTGA

Protein sequence

MSFSKSVVPFLLLAFISLSSSPLACAQKSLSAYDILQQYGFPVGILPVGVTGYEFNKATGEFSLFLNRKCRFWIDSYELEYKPTVKGVISQGIIKNLKGVSVKILLIWFNIVEVVSDSDELRFSIGVASANFPINSFYESPHCGCGFDCDKPQPQPPLPTFFHISMSTAAASPATNNGEAPSVYDILREFNFPIGLLPEGVVGCSLDRTTGKLEAYLNEACQFSPEDPYELRYKATISGQISKNRLTDLKGVTVKFMFFWVNIVEVVRNGDDLLFSVGVATASFPVDNFSECLPPGGCGADCKNGKGGKIKTKSLVSPA

Homology

[Close]

BLAST of CmaCh08G004300 vs. ExPASy Swiss-Prot
Match: Q9M015 (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-09
Identity = 26/95 (27.37%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 185 DILREFNFPIGLLPEGVVGCSLDRTTGKLEAYLNEACQFSPEDPYELRYKATISGQISKN 244
           ++L+E++ PIG+ P        D  T KL   +   C+   +D   L++  T++G + K 
Sbjct: 56  ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115

Query: 245 RLTDLKGVTVKFMFFWVNIVEVVRNGDDLLFSVGV 280
           +LTD++G+  K M  WV +  +  +   + F+ G+
Sbjct: 116 KLTDVEGIKTKVM-IWVKVTSISTDASKVYFTAGM 149

[Close]

BLAST of CmaCh08G004300 vs. TAIR 10
Match: AT1G02816.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 152.5 bits (384), Expect = 5.6e-37
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 15  FISLSSSPLACAQKS---LSAYDILQQYGFPVGILPVGVTGYEFNKATGEFSLFLNRKCR 74
           F+    SPL  A       +AY +LQ Y FPVGILP GV  Y+ +K+TG+F  + N+ C 
Sbjct: 12  FLFCIPSPLIAAANDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCS 71

Query: 75  FWID-SYELEYKPTVKGVISQGIIKNLKGVSVKILLIWFNIVEVVSDSDELRFSIGVASA 134
           F +  SY+L+YK T+ G IS+  I  L GV VK+L +W NIVEV+ + DEL FS+G+ SA
Sbjct: 72  FALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSA 131

Query: 135 NFPINSFYESPHCGCGFDC 150
           NF I+ FYESP CGCGFDC
Sbjct: 132 NFEIDEFYESPQCGCGFDC 150

[Close]

BLAST of CmaCh08G004300 vs. TAIR 10
Match: AT4G02360.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 149.4 bits (376), Expect = 4.8e-36
Identity = 73/150 (48.67%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 1   MSFSKSVVPFLLLAFISLSSSPLACAQKSLSAYDILQQYGFPVGILPVGVTGYEFNKATG 60
           MS   +    +   F ++S    A + +  +AYD ++ Y  P GILP GV  YE N  TG
Sbjct: 1   MSLDANTCSIVFFLFFTVS---FAVSGQKPTAYDAVKLYNLPPGILPKGVVDYELNPKTG 60

Query: 61  EFSLFLNRKCRFWIDSYELEYKPTVKGVISQGIIKNLKGVSVKILLIWFNIVEVVSDSDE 120
            F ++ N  C F I SY+L+YK T+ GVIS G +KNLKGVSVK+L  W NI EV  D  +
Sbjct: 61  NFKVYFNDTCEFTIQSYQLKYKSTISGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGAD 120

Query: 121 LRFSIGVASANFPINSFYESPHCGCGFDCD 151
           L FS+G+ASA+FP  +F ESP CGCGFDC+
Sbjct: 121 LDFSVGIASASFPAANFEESPQCGCGFDCN 147

[Close]

BLAST of CmaCh08G004300 vs. TAIR 10
Match: AT4G02370.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-34
Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 0


Query: 6   SVVPFLLLAFISLSSSPLACAQKSLS----AYDILQQYGFPVGILPVGVTGYEFNKATGE 65
           S +P L+ + + LSS   A    + S    AY +LQ Y FPVGILP GV  Y+ +  TG+
Sbjct: 2   SRLPILIASCLFLSSLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGK 61

Query: 66  FSLFLNRKCRF-WIDSYELEYKPTVKGVISQGIIKNLKGVSVKILLIWFNIVEVVSDSDE 125
           F  + N  C F  + SY+L YK T+ G IS+  +K L GV VK+L +W NIVEV+ + DE
Sbjct: 62  FHAYFNDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDE 121

Query: 126 LRFSIGVASANFPINSFYESPHCGCGFDC 150
           + FS+G+ SANF I  F ESP CGCGF+C
Sbjct: 122 MEFSVGITSANFAIQEFLESPQCGCGFEC 150

[Close]

BLAST of CmaCh08G004300 vs. TAIR 10
Match: AT1G02813.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-32
Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 10  FLLLAFISLSSSPLACAQKSLSAYDILQQYGFPVGILPVGVTGYEFNKATGEFSLFLNRK 69
           FLLL    LS+S     QK  S Y +L+ Y  P GILP GV  Y+ N+ TG F +  N  
Sbjct: 7   FLLL----LSTSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTT 66

Query: 70  CRFWIDSYELEYKPTVKGVISQGIIKNLKGVSVKILLIWFNIVEVVSDSDELRFSIGVAS 129
           C+F IDSY+++YKP + G+I++G +  L GVSVK+L  W NI EV  D D++ F +G AS
Sbjct: 67  CQFSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAAS 126

Query: 130 ANFPINSFYESPHCGCGFDCDKP 153
             F    F +SP CGCGF+C +P
Sbjct: 127 EEFSSKYFVDSPKCGCGFNCYRP 145

[Close]

BLAST of CmaCh08G004300 vs. TAIR 10
Match: AT5G19590.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-16
Identity = 52/145 (35.86%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 1   MSFSKSVVPFLLLAFISLSSSPLACAQKSLSAYDILQQYGFPVGILPVGVTGYEFNKATG 60
           M  S  ++  L+L  ISL   P    +K   A+  L  +GFP+G+LP+ V  Y  N+ +G
Sbjct: 1   MKISLFLLSILILLPISL-QDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSG 60

Query: 61  EFSLFLNRKCRFWI--DSYELEYKPTVKGVISQGIIKNLKGVSVKILLIWFNIVEVVSDS 120
           +FSLFLN  C+  +  D+Y   Y   V G ISQG I  L+G+ V+     ++I  + S  
Sbjct: 61  DFSLFLNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSG 120

Query: 121 DELRFSIGVASANFPINSFYESPHC 144
           D L F +   +A +P  +F ES  C
Sbjct: 121 DNLVFEVAGITAKYPSKNFDESLDC 144

The following BLAST results are available for this feature:

BLAST of CmaCh08G004300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M015	2.2e-09	27.37	Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 P...	[more]

BLAST of CmaCh08G004300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02816.1	5.6e-37	51.80	Protein of unknown function, DUF538	[more]
AT4G02360.1	4.8e-36	48.67	Protein of unknown function, DUF538	[more]
AT4G02370.1	1.2e-34	47.65	Protein of unknown function, DUF538	[more]
AT1G02813.1	1.9e-32	46.85	Protein of unknown function, DUF538	[more]
AT5G19590.1	1.9e-16	35.86	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 23..143 e-value: 3.6E-33 score: 116.2 coord: 165..293 e-value: 4.9E-34 score: 119.0
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 162..302
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 12..149
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 183..289 e-value: 8.1E-34 score: 116.4 coord: 32..137 e-value: 9.0E-33 score: 113.1
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 10..152
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 161..317
None	No IPR available	PANTHER	PTHR31676:SF156	F22D16.19 PROTEIN	coord: 161..317
None	No IPR available	PANTHER	PTHR31676:SF156	F22D16.19 PROTEIN	coord: 10..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G004300.1	CmaCh08G004300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds