CmaCh08G003080 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G003080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RAN GTPase-activating protein 1-like
Location	Cma_Chr08: 1757282 .. 1761054 (-)
RNA-Seq Expression	CmaCh08G003080
Synteny	CmaCh08G003080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTTTTTGGTAACTTCACTTGAAAAGCAAAGACAAAAACCCGTAAAAGGGACGCTTTGATCCGAGTTATCATTTGATCCGTTTGGATTCGATTGGAGTTTCATCATTTCCCTCCAATTCTTCACACGCTCTTCGCTTTCTCTATCACCAATTTTTCGATGATTGCCCTCCGCCGCCCTCTCTAAAACCTTAAGATTCTTGCATAAAATTTCCCTTTCCTGGGAGATTTCTGAGGAAAATCATTTTTAATCCGTTTTCCTCCCCATTTTCTCCCTTTTTTTTTTCTTTCTAGGGTTCCGCTTCTGAGGCTTTCCACTCTCCTCCCAGGTATTGATTTCATCTTTCTGCGAACTTTATCCCCTTTTTTTTTTTTTTCAGTTTTTTTTCGCCGGCGATTCTGTTGCGTTGTATCTTTATATGTTCGATGAGTTGACGTAAAACTTTTTGTTGTTAAGATCGTACCGTAATCTGTGTTCCCAAATGGTTCTTATTATACTTTGATTTGTAAATTGTTCGCTTTGTGGAAATTGATTAAGGTGTTTTAGATTTCGTTTTTTTGCTTTTGTTCATTTGCTTTTTTTTTTTTTTTTTGCTTGTCCTTTAAATTCCCCCTTTTTCCTGTTCCATAATCTTTTTGGGGGTTCCAATAAGTTTATGTTTATGCCTCGTTTCATTCCTTTGAAAGTCTAGGAAACTTAACGGCAGATGGGAACGATCATATTAGAGAAAATCCCAATTATAACAATTAACATTATTCTTGGTGCTAGTTTTTAGATGGCTTTTAACTTCCGTGGTCGACCATGCCGTGTATCTTTATTGAATTCAATGTGTGGGATTTACGCTTTTGATTTTTGGTTGTAATTTAATGGGCTTCCTTTAATCTTCCCCTTTCTAAAAGAAAGAGAAAGAAGCATCCCTTATGATTTGATAGGTTTTGCTGCTTGTTTTCGTGGCCTTTTGTCCAATTTTCTCAGGAATGTATGAAGTTTAGTATCCTCTATTGTATTGTAGTACTTGGTTTAGTACTAATGCGTGATATACATTTCCAACGTGTCATTTCTGAAACTAATCATAACGATACGTTTTTAACTTTTACAATGGGAATTGTATGCTATTAAACATCCATTGTCAATCTCTTGGGAATCCTTCATATTGAGTTTTTGTCATTTTCAGCATATAACATTTGATTACTGCTGAATTCATTTTTAGTTAATAGTTTGTTTGTTGATCTTGCAACTGCGTTATGCTGCCATGATGTAAATAAACATCCAAATAAGATTTGGGATGGTCATAGAAAGTTTAAGATAGTGATGCCTTGCAAATTATTATTTCCTTGAGTAATAGTCATTCTAAATCTAAACCATTTTGACATTGCTATCAGGCATCAATTGTTAACAATGATAACCAACTACAGTTTTTATAATGCCTCTTGTGCAGTGTATCTATCTTTTCTAGATACCCTGTTTATACTCAATTTAAGCTTCATGTCATCTTTCTAAAAAATTACATGGGAAATTATATTTATTCCCTGATGGATTATTCATCAAATTTTATGAGTTATTCATCAGATACTATTCTGATATATTTGCCCGTATGGTATAAGATAGGCTAGTGACTCACTGGGAAATTTGATATTATGAAAATAGTTGAATCTTGCTATATAGTTGTGTTTCTAAATTGATGGCTGTATGGCTTTGCATTTACATTTAAGGACATTATTTGATATAGGGATATAGTATGTGCCTGACGATTTTCCAATCTTCTGTAAGATGCAAGCTTAAGCTGGGAAATAAATCCCAACTAATTTCATTTTTCCCTCTGAAGTCTGAACGTTGATCATTATTCAACGTTTCTTATTGTGGCTCGTTTTATTGCAGATTATTTTGTTATGGATTCTGCAGCCCAGACATTCCCACCTCGTGTGATGTCTATTAAATTATGGCCCCCAAGCCAGAGCACTAGGTTCATGCTCATAGAACGAATCATCAAGAATCTTACAACACCCTCCATTTTTTCCCGGAAGTATGGCTTATTGAGCAAAGAAGAAGCAGAGGAGGATGCCAAGAAAGTAGAAGATATTGCTTTTGCAACTGCAAACCAACACTTTGAGAAGGAGCCAGATGGCGATGGGAGCTCTGCAGTTCAAATTTATGCCAAAGAATCTAGTAGGCTTATGCTGGATATATTGAAAAGAGGTCCTGTATTAAAGGAGGATGGAGAGGCAATAATATCTGAGAGGGCAGCTGCCAAAGGAACTGTTTTTGATATATCAGGAGGACGAAGGGCCTTTATTGATGCAGAGGAGGCTAAGGAGCTTTTGGAACCCCTAAAAGATCCTGGAAACCTGTTTACAAAGATCTGCTTTAGTAATAGAAGTTTTGGCTTAGATGCTGCTCGTGTGGCTGAACCGATCTTGATGTCCATCAAAGATAGGTTGACTGAAGTTGACCTATCAGATTTCATTGCTGGAAGGCCTGAAGGCGAGGCTCTTGAAGTCGTGAATATTTTTTCTTCAGCATTAGAAGGTTGTGACTTGAGGTCTCTGGACCTCTCAAATAATGCCATGGGTGAGAAGGGTGTCCGGGCATTTGGGTCCCTTTTGAAATCACAGAAACATTTGGAGGAGCTTTATTTGATGAATGATGGTATTTCGGAAGAAGCTGCAAGAGCAATCTGCGAGTTGATTCCGTCTACAGACAAGCTTCGTATCCTTCAGTTCCATAATAACATGACAGGAGATGAAGGTGCAATTGCAATTTCCGAAATCGTCAAGGGTTCTCCTGCATTGGAGGATTTCCGTTGTTCCTCGACCAGGGTAGGTTCGGAAGGAGGAGTGGCTCTAGCTGAAGCTATTGGGACTTGTACCCATCTCAAGAAGCTTGATTTGCGCGACAACATGTTCGGGGTGGAAGCTGGAATTGCTTTGAGTAAATCTATATCTGCTTTTCCAGGTCTTACTGAAATTTATCTTAGTTATTTGAACTTGGAGGATGAAGGAGCTGAAGCATTGGCTAACGCCCTCAAAGATTCTGCTCCTTCCCTTGAAGTTCTTGAAATGGCTGGAAATGATATAACTGCAAAAGGTGCTGCCTCAATTGCAGCCTGTGTAGCAACAAAGCAATTCCTTAGTAAGTTATATTTGGCTGAGAATGAACTGAAGGATGATGGTGTGATTTTGATTAGCAAGGCACTGCAGGATGGACACGGTCAGTTGAGCGAAGTCGACGTGAGCACAAATTCAATTCGAAGGGCCGGGGCAAGATTCTTAGCTCAAATATTAGTGCAGAAGCCAGGATTTAAGTTGCTAAACATCAATGCCAATTATATATCTGAAGAAGGGATCGATGAAGTGAAGGACATATTTAAGAATTCTCCCAGCATGCTTGGACCTCTGGATGAGAACGATCCAGAAGGAGAAGACTACGACGAAGATGCTGAAGAGAACGGTGATCACGACGATGAACTTGAATCGAAACTCAAGGGCCTCGACATTAAAAGAGATGAGTAAGAATTCCACAGGTCTTGTTTTTGTTTCAGGTTTGTTTGCTATTTATTGATTTTTGCTTTCTGTATGTGGGGTAGTTCCATACCAATGTTTAACCCCGCCAAGTGTAACAGATCTCTGCTATTATTAGCCATGCATTATTAGTGTTCTAGTTTAGAGATTTTTGAAGAAAAATTAGTTGCTTGCTGGTATTTCTGTAATTTGCCGCTACTTTTTCAATCTCTATTTCTTGTTGGCGTTAAATCGATACAGTTCATCCAGAA

mRNA sequence

ATGGGGGCTTTTTGGGTTCCGCTTCTGAGGCTTTCCACTCTCCTCCCAGATTATTTTGTTATGGATTCTGCAGCCCAGACATTCCCACCTCGTGTGATGTCTATTAAATTATGGCCCCCAAGCCAGAGCACTAGGTTCATGCTCATAGAACGAATCATCAAGAATCTTACAACACCCTCCATTTTTTCCCGGAAGTATGGCTTATTGAGCAAAGAAGAAGCAGAGGAGGATGCCAAGAAAGTAGAAGATATTGCTTTTGCAACTGCAAACCAACACTTTGAGAAGGAGCCAGATGGCGATGGGAGCTCTGCAGTTCAAATTTATGCCAAAGAATCTAGTAGGCTTATGCTGGATATATTGAAAAGAGGTCCTGTATTAAAGGAGGATGGAGAGGCAATAATATCTGAGAGGGCAGCTGCCAAAGGAACTGTTTTTGATATATCAGGAGGACGAAGGGCCTTTATTGATGCAGAGGAGGCTAAGGAGCTTTTGGAACCCCTAAAAGATCCTGGAAACCTGTTTACAAAGATCTGCTTTAGTAATAGAAGTTTTGGCTTAGATGCTGCTCGTGTGGCTGAACCGATCTTGATGTCCATCAAAGATAGGTTGACTGAAGTTGACCTATCAGATTTCATTGCTGGAAGGCCTGAAGGCGAGGCTCTTGAAGTCGTGAATATTTTTTCTTCAGCATTAGAAGGTTGTGACTTGAGGTCTCTGGACCTCTCAAATAATGCCATGGGTGAGAAGGGTGTCCGGGCATTTGGGTCCCTTTTGAAATCACAGAAACATTTGGAGGAGCTTTATTTGATGAATGATGGTATTTCGGAAGAAGCTGCAAGAGCAATCTGCGAGTTGATTCCGTCTACAGACAAGCTTCGTATCCTTCAGTTCCATAATAACATGACAGGAGATGAAGGTGCAATTGCAATTTCCGAAATCGTCAAGGGTTCTCCTGCATTGGAGGATTTCCGTTGTTCCTCGACCAGGGTAGGTTCGGAAGGAGGAGTGGCTCTAGCTGAAGCTATTGGGACTTGTACCCATCTCAAGAAGCTTGATTTGCGCGACAACATGTTCGGGGTGGAAGCTGGAATTGCTTTGAGTAAATCTATATCTGCTTTTCCAGGTCTTACTGAAATTTATCTTAGTTATTTGAACTTGGAGGATGAAGGAGCTGAAGCATTGGCTAACGCCCTCAAAGATTCTGCTCCTTCCCTTGAAGTTCTTGAAATGGCTGGAAATGATATAACTGCAAAAGGTGCTGCCTCAATTGCAGCCTGTGTAGCAACAAAGCAATTCCTTAGTAAGTTATATTTGGCTGAGAATGAACTGAAGGATGATGGTGTGATTTTGATTAGCAAGGCACTGCAGGATGGACACGGTCAGTTGAGCGAAGTCGACGTGAGCACAAATTCAATTCGAAGGGCCGGGGCAAGATTCTTAGCTCAAATATTAGTGCAGAAGCCAGGATTTAAGTTGCTAAACATCAATGCCAATTATATATCTGAAGAAGGGATCGATGAAGTGAAGGACATATTTAAGAATTCTCCCAGCATGCTTGGACCTCTGGATGAGAACGATCCAGAAGGAGAAGACTACGACGAAGATGCTGAAGAGAACGGTGATCACGACGATGAACTTGAATCGAAACTCAAGGGCCTCGACATTAAAAGAGATGAGTAAGAATTCCACAGGTCTTGTTTTTGTTTCAGGTTTGTTTGCTATTTATTGATTTTTGCTTTCTGTATGTGGGGTAGTTCCATACCAATGTTTAACCCCGCCAAGTGTAACAGATCTCTGCTATTATTAGCCATGCATTATTAGTGTTCTAGTTTAGAGATTTTTGAAGAAAAATTAGTTGCTTGCTGGTATTTCTGTAATTTGCCGCTACTTTTTCAATCTCTATTTCTTGTTGGCGTTAAATCGATACAGTTCATCCAGAA

Coding sequence (CDS)

ATGGGGGCTTTTTGGGTTCCGCTTCTGAGGCTTTCCACTCTCCTCCCAGATTATTTTGTTATGGATTCTGCAGCCCAGACATTCCCACCTCGTGTGATGTCTATTAAATTATGGCCCCCAAGCCAGAGCACTAGGTTCATGCTCATAGAACGAATCATCAAGAATCTTACAACACCCTCCATTTTTTCCCGGAAGTATGGCTTATTGAGCAAAGAAGAAGCAGAGGAGGATGCCAAGAAAGTAGAAGATATTGCTTTTGCAACTGCAAACCAACACTTTGAGAAGGAGCCAGATGGCGATGGGAGCTCTGCAGTTCAAATTTATGCCAAAGAATCTAGTAGGCTTATGCTGGATATATTGAAAAGAGGTCCTGTATTAAAGGAGGATGGAGAGGCAATAATATCTGAGAGGGCAGCTGCCAAAGGAACTGTTTTTGATATATCAGGAGGACGAAGGGCCTTTATTGATGCAGAGGAGGCTAAGGAGCTTTTGGAACCCCTAAAAGATCCTGGAAACCTGTTTACAAAGATCTGCTTTAGTAATAGAAGTTTTGGCTTAGATGCTGCTCGTGTGGCTGAACCGATCTTGATGTCCATCAAAGATAGGTTGACTGAAGTTGACCTATCAGATTTCATTGCTGGAAGGCCTGAAGGCGAGGCTCTTGAAGTCGTGAATATTTTTTCTTCAGCATTAGAAGGTTGTGACTTGAGGTCTCTGGACCTCTCAAATAATGCCATGGGTGAGAAGGGTGTCCGGGCATTTGGGTCCCTTTTGAAATCACAGAAACATTTGGAGGAGCTTTATTTGATGAATGATGGTATTTCGGAAGAAGCTGCAAGAGCAATCTGCGAGTTGATTCCGTCTACAGACAAGCTTCGTATCCTTCAGTTCCATAATAACATGACAGGAGATGAAGGTGCAATTGCAATTTCCGAAATCGTCAAGGGTTCTCCTGCATTGGAGGATTTCCGTTGTTCCTCGACCAGGGTAGGTTCGGAAGGAGGAGTGGCTCTAGCTGAAGCTATTGGGACTTGTACCCATCTCAAGAAGCTTGATTTGCGCGACAACATGTTCGGGGTGGAAGCTGGAATTGCTTTGAGTAAATCTATATCTGCTTTTCCAGGTCTTACTGAAATTTATCTTAGTTATTTGAACTTGGAGGATGAAGGAGCTGAAGCATTGGCTAACGCCCTCAAAGATTCTGCTCCTTCCCTTGAAGTTCTTGAAATGGCTGGAAATGATATAACTGCAAAAGGTGCTGCCTCAATTGCAGCCTGTGTAGCAACAAAGCAATTCCTTAGTAAGTTATATTTGGCTGAGAATGAACTGAAGGATGATGGTGTGATTTTGATTAGCAAGGCACTGCAGGATGGACACGGTCAGTTGAGCGAAGTCGACGTGAGCACAAATTCAATTCGAAGGGCCGGGGCAAGATTCTTAGCTCAAATATTAGTGCAGAAGCCAGGATTTAAGTTGCTAAACATCAATGCCAATTATATATCTGAAGAAGGGATCGATGAAGTGAAGGACATATTTAAGAATTCTCCCAGCATGCTTGGACCTCTGGATGAGAACGATCCAGAAGGAGAAGACTACGACGAAGATGCTGAAGAGAACGGTGATCACGACGATGAACTTGAATCGAAACTCAAGGGCCTCGACATTAAAAGAGATGAGTAA

Protein sequence

MGAFWVPLLRLSTLLPDYFVMDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKKVEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAAKGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIKDRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKSQKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAENELKDDGVILISKALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYISEEGIDEVKDIFKNSPSMLGPLDENDPEGEDYDEDAEENGDHDDELESKLKGLDIKRDE

Homology

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BLAST of CmaCh08G003080 vs. ExPASy Swiss-Prot
Match: Q9LE82 (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 7.5e-207
Identity = 374/540 (69.26%), Postives = 452/540 (83.70%), Query Frame = 0


Query: 21  MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 80
           MD +A+T   RV+S+K+WPPS+STR ML+ER+ KN+TTPSIFSRKYGLLS EEAE+DAK+
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 81  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 140
           +ED+AFATAN+HF+ EPDGDG+SAV +YAKESS+LMLD++KRGP  +E+ E  +S+    
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGP--QEESEVEVSKDG-- 120

Query: 141 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 200
               FDISGG RAFI+ EEA++LL PL DP N +TKI FSNRSFG +AA+ A  +L SIK
Sbjct: 121 -DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIK 180

Query: 201 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 260
           D+LTEVDLSDF+AGRPE EALEV+N+FSSALEG  LR L+LS+NA+GEKG+RAF SL+ S
Sbjct: 181 DQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLINS 240

Query: 261 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 320
           Q  LEELYLMNDGISE+AARA+ EL+PSTDK+R+LQFHNNMTGDEGA AI+EIV+  P+L
Sbjct: 241 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSL 300

Query: 321 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 380
           EDFRCSSTR+GSEGGVALAEA+  C+HLKKLDLRDNMFGVE GIAL+K++S    LTEIY
Sbjct: 301 EDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIY 360

Query: 381 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAE 440
           +SYLNLEDEG EAL+ AL  SAPSLEVLE+AGNDIT K   ++AAC+A+KQ L+KL L+E
Sbjct: 361 MSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSE 420

Query: 441 NELKDDGVILISKALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYI 500
           NELKD+G ILI+KA+ +GH QL EVD+STN IRRAGAR LAQ +V+K  FKLLNIN N+I
Sbjct: 421 NELKDEGTILIAKAV-EGHDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFI 480

Query: 501 SEEGIDEVKDIFKNSPSMLGPLDENDPEGEDY-DEDAEENGDHDDELESKLKGLDIKRDE 560
           SEEGIDEV D+FK+    L PLD+NDPEGED+ DED EE G+  +ELESKL  L IK+ E
Sbjct: 481 SEEGIDEVNDMFKDCLDKLVPLDDNDPEGEDFEDEDEEEEGEDGNELESKLGSLKIKQGE 534

[Close]

BLAST of CmaCh08G003080 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 695.3 bits (1793), Expect = 5.7e-199
Identity = 352/537 (65.55%), Postives = 447/537 (83.24%), Query Frame = 0


Query: 30  PRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKKVEDIAFATA 89
           P   SIKLWPPS  TR  LIERI  N ++ +IF+ KYG L+K++A E+AK++EDIAF+TA
Sbjct: 9   PHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTA 68

Query: 90  NQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA-KGTVFDIS 149
           NQ FE+EPDGDG SAVQ+YAKE S+L+L++LK+GPV K     +ISE + + + T FDIS
Sbjct: 69  NQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSPRETFFDIS 128

Query: 150 GGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIKDRLTEVDL 209
            G+RAFI+AEEA+ELL+PLK+PGN +TKICFSNRSFGL AARVAEPIL S+KD+L EVDL
Sbjct: 129 KGKRAFIEAEEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVDL 188

Query: 210 SDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKSQKHLEELY 269
           SDF+AGRPE EALEV+NIFS AL+G  L SL+LS+NA+GEKGVRAFG+LLKS   LEELY
Sbjct: 189 SDFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGALLKSLSSLEELY 248

Query: 270 LMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPALEDFRCSST 329
           LMNDGIS+EAA+A+ ELIPST+ LR+L FHNNMTGDEGA+AI+E+VK SP LE+FRCSST
Sbjct: 249 LMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSST 308

Query: 330 RVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIYLSYLNLED 389
           RVGS+GG+AL+EA+  CTH++KLDLRDNMFG EAG++LSK++S+F  +TE+YLSYLNLED
Sbjct: 309 RVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLED 368

Query: 390 EGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAENELKDDGV 449
           EGA A+ NALK+SA  +EVLEMAGNDIT + A++IAACVA KQ L+KL L+ENELKD+G 
Sbjct: 369 EGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGC 428

Query: 450 ILISKALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYISEEGIDEV 509
           + I+  +++GH +L  +D+STN IRRAGAR LA ++V+K  FKLLNI+ N ISEEGI+E+
Sbjct: 429 VQIANCIEEGHSKLQYIDMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEEL 488

Query: 510 KDIFKNSPSMLGPLDENDPEGEDYDEDAEENGDHDD------ELESKLKGLDIKRDE 560
           K+IFK SP +LG LDENDP+GE+ D+D E+  D ++      ELESKLK L++ +++
Sbjct: 489 KEIFKKSPELLGALDENDPDGEEDDDDEEDEEDEENEGNGNGELESKLKNLEVNQED 545

[Close]

BLAST of CmaCh08G003080 vs. ExPASy Swiss-Prot
Match: Q5DU56 (Protein NLRC3 OS=Mus musculus OX=10090 GN=Nlrc3 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-25
Identity = 97/376 (25.80%), Postives = 175/376 (46.54%), Query Frame = 0


Query: 109  AKESSRLMLDILKRGPVLKEDGEAIISERAAAKGTVFDISGGRRAFIDAEEAKELLEPLK 168
            A + +R +  +  +  V+K+DG   ++E   +  T+  +   ++  I    A+++ + LK
Sbjct: 716  ALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTI-SMLQLQKNLIGLIGAQQMADALK 775

Query: 169  DPGNLFTKICFSNRSFGLDAARVAEPILMSIKDRLTEVDLSDFIAGRPEGEALEVVNIFS 228
               +L   + FS+ + G D   +A                          EAL+V  I  
Sbjct: 776  QNRSL-KALMFSSNTIG-DRGAIA------------------------LAEALKVNQI-- 835

Query: 229  SALEGCDLRSLDLSNNAMGEKGVRAFGSLLKSQKHLEELYLMNDGISEEAARAICELIPS 288
                   L +LDL +N++ + GV      L S + L  L L  + IS E A+A+ + +  
Sbjct: 836  -------LENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCR 895

Query: 289  TDKLRILQFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSEGGVALAEAIGTCTHL 348
             + L+ L    N+  D GA AI+  V  + +L         + +    AL +A+     L
Sbjct: 896  NNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTL 955

Query: 349  KKLDLRDNMFGVEAGIALSKSISAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVL 408
              LDL++N  G E   +++ ++     L  +YL   ++  +GA+AL  AL  +  +LE+L
Sbjct: 956  TTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNR-TLEIL 1015

Query: 409  EMAGNDITAKGAASIAACVATKQFLSKLYLAENELKDDGVILISKALQDGHGQLSEVDVS 468
            ++ GND+ A GA ++A  +     L +L L EN L  DG I ++ AL + HG L  +++ 
Sbjct: 1016 DLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHG-LHHINLQ 1053

Query: 469  TNSIRRAGARFLAQIL 485
             N I  + AR +++ +
Sbjct: 1076 GNPIGESAARMISEAI 1053

[Close]

BLAST of CmaCh08G003080 vs. ExPASy Swiss-Prot
Match: Q7RTR2 (NLR family CARD domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NLRC3 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 6.5e-25
Identity = 76/249 (30.52%), Postives = 127/249 (51.00%), Query Frame = 0


Query: 236  LRSLDLSNNAMGEKGVRAFGSLLKSQKHLEELYLMNDGISEEAARAICELIPSTDKLRIL 295
            L SLDL +N++ + GV A    L + + L  L L  + IS E A+AI   + +   L+ L
Sbjct: 808  LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNL 867

Query: 296  QFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRD 355
                N+  D+GA AI+  V+ +  L         + +    AL +A+     L  LDL++
Sbjct: 868  DLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQE 927

Query: 356  NMFGVEAGIALSKSISAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDI 415
            N  G +   A+++++     LT +YL   ++   GA+ L  AL  +  +LE+L++ GN I
Sbjct: 928  NAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNR-TLEILDLRGNAI 987

Query: 416  TAKGAASIAACVATKQFLSKLYLAENELKDDGVILISKALQDGHGQLSEVDVSTNSIRRA 475
               GA ++A  +     L +L L EN L  DG I I+ AL   H +L  +++  N I  +
Sbjct: 988  GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNH-RLQHINLQGNHIGDS 1047

Query: 476  GARFLAQIL 485
            GAR +++ +
Sbjct: 1048 GARMISEAI 1054

[Close]

BLAST of CmaCh08G003080 vs. ExPASy Swiss-Prot
Match: P46061 (Ran GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 7.9e-23
Identity = 107/397 (26.95%), Postives = 175/397 (44.08%), Query Frame = 0


Query: 157 AEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIKDRLTEVDLSDFIAGRP 216
           AE+AK++++ +++   L   +     + G++AARV    L   K  L     SD   GR 
Sbjct: 35  AEDAKDVIKEIEEFDGL-EALRLEGNTVGVEAARVIAKALEK-KSELKRCHWSDMFTGRL 94

Query: 217 EGEALEVVNIFSSAL--EGCDLRSLDLSNNAMGEKGVRAFGSLLKSQK--HLEELYLMND 276
             E    +      L   G  L  LDLS+NA G  GVR F +LLKS     L+EL L N 
Sbjct: 95  RSEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNC 154

Query: 277 GISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGS 336
           G+     + +           + + H   +     +A+   V G   LE          +
Sbjct: 155 GMGIGGGKILA--------AALTECHRKSSAQGKPLALKVFVAGRNRLE----------N 214

Query: 337 EGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIYLSYLNLEDEGAE 396
           +G  ALAEA G             + G                L E+++    +   G  
Sbjct: 215 DGATALAEAFG-------------IIGT---------------LEEVHMPQNGINHPGVT 274

Query: 397 ALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAENELKDDGVILIS 456
           ALA A   + P L V+ +  N  T KG  ++A  + T + +  +   +  ++  G + I+
Sbjct: 275 ALAQAFAIN-PLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIA 334

Query: 457 KALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYISEEGIDEVKDIF 516
            A++ G  +L E+++S   I+R  A  +A+ +  K   + L++N N + EEG ++++++ 
Sbjct: 335 DAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVM 378

Query: 517 K--NSPSMLGPLDENDPEGEDYDEDAEENGDHDDELE 548
              N   +L  L  +D EGE  DED EE G+ DDE E
Sbjct: 395 DSFNMAKVLASL--SDDEGE--DEDEEEEGEEDDEEE 378

[Close]

BLAST of CmaCh08G003080 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 721.5 bits (1861), Expect = 5.3e-208
Identity = 374/540 (69.26%), Postives = 452/540 (83.70%), Query Frame = 0


Query: 21  MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 80
           MD +A+T   RV+S+K+WPPS+STR ML+ER+ KN+TTPSIFSRKYGLLS EEAE+DAK+
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 81  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 140
           +ED+AFATAN+HF+ EPDGDG+SAV +YAKESS+LMLD++KRGP  +E+ E  +S+    
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGP--QEESEVEVSKDG-- 120

Query: 141 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 200
               FDISGG RAFI+ EEA++LL PL DP N +TKI FSNRSFG +AA+ A  +L SIK
Sbjct: 121 -DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIK 180

Query: 201 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 260
           D+LTEVDLSDF+AGRPE EALEV+N+FSSALEG  LR L+LS+NA+GEKG+RAF SL+ S
Sbjct: 181 DQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLINS 240

Query: 261 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 320
           Q  LEELYLMNDGISE+AARA+ EL+PSTDK+R+LQFHNNMTGDEGA AI+EIV+  P+L
Sbjct: 241 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSL 300

Query: 321 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 380
           EDFRCSSTR+GSEGGVALAEA+  C+HLKKLDLRDNMFGVE GIAL+K++S    LTEIY
Sbjct: 301 EDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIY 360

Query: 381 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAE 440
           +SYLNLEDEG EAL+ AL  SAPSLEVLE+AGNDIT K   ++AAC+A+KQ L+KL L+E
Sbjct: 361 MSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSE 420

Query: 441 NELKDDGVILISKALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYI 500
           NELKD+G ILI+KA+ +GH QL EVD+STN IRRAGAR LAQ +V+K  FKLLNIN N+I
Sbjct: 421 NELKDEGTILIAKAV-EGHDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFI 480

Query: 501 SEEGIDEVKDIFKNSPSMLGPLDENDPEGEDY-DEDAEENGDHDDELESKLKGLDIKRDE 560
           SEEGIDEV D+FK+    L PLD+NDPEGED+ DED EE G+  +ELESKL  L IK+ E
Sbjct: 481 SEEGIDEVNDMFKDCLDKLVPLDDNDPEGEDFEDEDEEEEGEDGNELESKLGSLKIKQGE 534

[Close]

BLAST of CmaCh08G003080 vs. TAIR 10
Match: AT3G63130.2 (RAN GTPase activating protein 1 )

HSP 1 Score: 721.5 bits (1861), Expect = 5.3e-208
Identity = 374/540 (69.26%), Postives = 452/540 (83.70%), Query Frame = 0


Query: 21  MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 80
           MD +A+T   RV+S+K+WPPS+STR ML+ER+ KN+TTPSIFSRKYGLLS EEAE+DAK+
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 81  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 140
           +ED+AFATAN+HF+ EPDGDG+SAV +YAKESS+LMLD++KRGP  +E+ E  +S+    
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGP--QEESEVEVSKDG-- 120

Query: 141 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 200
               FDISGG RAFI+ EEA++LL PL DP N +TKI FSNRSFG +AA+ A  +L SIK
Sbjct: 121 -DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIK 180

Query: 201 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 260
           D+LTEVDLSDF+AGRPE EALEV+N+FSSALEG  LR L+LS+NA+GEKG+RAF SL+ S
Sbjct: 181 DQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLINS 240

Query: 261 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 320
           Q  LEELYLMNDGISE+AARA+ EL+PSTDK+R+LQFHNNMTGDEGA AI+EIV+  P+L
Sbjct: 241 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSL 300

Query: 321 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 380
           EDFRCSSTR+GSEGGVALAEA+  C+HLKKLDLRDNMFGVE GIAL+K++S    LTEIY
Sbjct: 301 EDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIY 360

Query: 381 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAE 440
           +SYLNLEDEG EAL+ AL  SAPSLEVLE+AGNDIT K   ++AAC+A+KQ L+KL L+E
Sbjct: 361 MSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSE 420

Query: 441 NELKDDGVILISKALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYI 500
           NELKD+G ILI+KA+ +GH QL EVD+STN IRRAGAR LAQ +V+K  FKLLNIN N+I
Sbjct: 421 NELKDEGTILIAKAV-EGHDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFI 480

Query: 501 SEEGIDEVKDIFKNSPSMLGPLDENDPEGEDY-DEDAEENGDHDDELESKLKGLDIKRDE 560
           SEEGIDEV D+FK+    L PLD+NDPEGED+ DED EE G+  +ELESKL  L IK+ E
Sbjct: 481 SEEGIDEVNDMFKDCLDKLVPLDDNDPEGEDFEDEDEEEEGEDGNELESKLGSLKIKQGE 534

[Close]

BLAST of CmaCh08G003080 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 695.3 bits (1793), Expect = 4.1e-200
Identity = 352/537 (65.55%), Postives = 447/537 (83.24%), Query Frame = 0


Query: 30  PRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKKVEDIAFATA 89
           P   SIKLWPPS  TR  LIERI  N ++ +IF+ KYG L+K++A E+AK++EDIAF+TA
Sbjct: 9   PHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTA 68

Query: 90  NQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA-KGTVFDIS 149
           NQ FE+EPDGDG SAVQ+YAKE S+L+L++LK+GPV K     +ISE + + + T FDIS
Sbjct: 69  NQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSPRETFFDIS 128

Query: 150 GGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIKDRLTEVDL 209
            G+RAFI+AEEA+ELL+PLK+PGN +TKICFSNRSFGL AARVAEPIL S+KD+L EVDL
Sbjct: 129 KGKRAFIEAEEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVDL 188

Query: 210 SDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKSQKHLEELY 269
           SDF+AGRPE EALEV+NIFS AL+G  L SL+LS+NA+GEKGVRAFG+LLKS   LEELY
Sbjct: 189 SDFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGALLKSLSSLEELY 248

Query: 270 LMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPALEDFRCSST 329
           LMNDGIS+EAA+A+ ELIPST+ LR+L FHNNMTGDEGA+AI+E+VK SP LE+FRCSST
Sbjct: 249 LMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSST 308

Query: 330 RVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIYLSYLNLED 389
           RVGS+GG+AL+EA+  CTH++KLDLRDNMFG EAG++LSK++S+F  +TE+YLSYLNLED
Sbjct: 309 RVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLED 368

Query: 390 EGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAENELKDDGV 449
           EGA A+ NALK+SA  +EVLEMAGNDIT + A++IAACVA KQ L+KL L+ENELKD+G 
Sbjct: 369 EGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGC 428

Query: 450 ILISKALQDGHGQLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYISEEGIDEV 509
           + I+  +++GH +L  +D+STN IRRAGAR LA ++V+K  FKLLNI+ N ISEEGI+E+
Sbjct: 429 VQIANCIEEGHSKLQYIDMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEEL 488

Query: 510 KDIFKNSPSMLGPLDENDPEGEDYDEDAEENGDHDD------ELESKLKGLDIKRDE 560
           K+IFK SP +LG LDENDP+GE+ D+D E+  D ++      ELESKLK L++ +++
Sbjct: 489 KEIFKKSPELLGALDENDPDGEEDDDDEEDEEDEENEGNGNGELESKLKNLEVNQED 545

[Close]

BLAST of CmaCh08G003080 vs. TAIR 10
Match: AT3G06000.1 (RNI-like superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-42
Identity = 100/203 (49.26%), Postives = 139/203 (68.47%), Query Frame = 0


Query: 341 AIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIYLSYLNLEDEGAEALANALKD 400
           A  TCTH+K             G+++SK  S+F  LT I LSY NLE+ GA AL NALK+
Sbjct: 16  AFETCTHIK------------VGVSMSKPFSSFSFLTVINLSYTNLENGGAIALVNALKN 75

Query: 401 SAPSLEVLEMAGNDITAKGAASIAACVATKQFLSKLYLAENELKDDGVILISKALQDGHG 460
           SAPSL+V+EMAGN+IT + A +IA C+A K+ L KL L+EN+LKD+G + I K+++D   
Sbjct: 76  SAPSLQVIEMAGNNITYEAATAIAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMED--W 135

Query: 461 QLSEVDVSTNSIRRAGARFLAQILVQKPGFKLLNINANYISEEGIDEVKDIFKNSPSMLG 520
           +L  VD+S N +RR GA  LA+++V+K  FK+LNI+ N IS +GI+E+K IF N P +LG
Sbjct: 136 ELEYVDMSYNDLRREGALRLARVVVKKGSFKMLNIDGNMISLKGIEEIKVIFTNCPKLLG 195

Query: 521 PLDENDPEGEDYDEDAEENGDHD 544
           PLD+N    +D D+D  EN + +
Sbjct: 196 PLDKNVYNVDD-DDDLRENDEDE 203

[Close]

BLAST of CmaCh08G003080 vs. TAIR 10
Match: AT1G10510.1 (RNI-like superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-26
Identity = 76/278 (27.34%), Postives = 132/278 (47.48%), Query Frame = 0


Query: 236 LRSLDLSNNAMGEKGVRAFGSLLKSQKHLEELYLMNDGISEEAARAICELIPSTDKLRIL 295
           +  +  S N +   GV+AF  +L+S   L+ L L  + I +E A+ +C  +     + IL
Sbjct: 200 VEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEIL 259

Query: 296 QFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRD 355
           Q ++   GDEGA  I+E++K +  L     ++  +   G  +LA A+     ++ L L  
Sbjct: 260 QLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNG 319

Query: 356 NMFGVEAGIALSKSISAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDI 415
           N  G     AL+K +     L E++L   ++ DEG  AL   L      + +L++  N I
Sbjct: 320 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSI 379

Query: 416 TAKGAASIAACVATKQFLSKLYLAENELKDDGVILISKALQDGHGQLSEVDVSTNSIRRA 475
           +AKGA  +A  +   + L  L L  N++ D+G   I+ +L+     ++ +D+  N+I   
Sbjct: 380 SAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNR-SIATIDLGGNNIHAE 439

Query: 476 GARFLAQILVQKPGFKLLNINANYISEEGIDEVKDIFK 514
           G   +AQ L        L +  N I  +G   + +I K
Sbjct: 440 GVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILK 476

The following BLAST results are available for this feature:

BLAST of CmaCh08G003080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE82	7.5e-207	69.26	RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 ...	[more]
Q9M651	5.7e-199	65.55	RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ...	[more]
Q5DU56	2.9e-25	25.80	Protein NLRC3 OS=Mus musculus OX=10090 GN=Nlrc3 PE=1 SV=2	[more]
Q7RTR2	6.5e-25	30.52	NLR family CARD domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NLRC3 PE=...	[more]
P46061	7.9e-23	26.95	Ran GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=2	[more]

BLAST of CmaCh08G003080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63130.1	5.3e-208	69.26	RAN GTPase activating protein 1	[more]
AT3G63130.2	5.3e-208	69.26	RAN GTPase activating protein 1	[more]
AT5G19320.1	4.1e-200	65.55	RAN GTPase activating protein 2	[more]
AT3G06000.1	2.1e-42	49.26	RNI-like superfamily protein	[more]
AT1G10510.1	1.2e-26	27.34	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 261..288 e-value: 0.46 score: 19.5 coord: 402..429 e-value: 0.21 score: 20.7 coord: 233..260 e-value: 2.4E-4 score: 30.4 coord: 430..457 e-value: 0.11 score: 21.5 coord: 459..486 e-value: 64.0 score: 4.4 coord: 345..372 e-value: 0.64 score: 18.5 coord: 373..400 e-value: 0.54 score: 19.0 coord: 317..344 e-value: 47.0 score: 5.3 coord: 289..316 e-value: 34.0 score: 6.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 516..559
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 543..559
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..542
None	No IPR available	PANTHER	PTHR46761:SF5	RAN GTPASE-ACTIVATING PROTEIN 2	coord: 21..559
None	No IPR available	PANTHER	PTHR46761	RAN GTPASE-ACTIVATING PROTEIN 1	coord: 21..559
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 145..537
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 34..131 e-value: 1.0E-34 score: 120.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 150..429 e-value: 1.0E-60 score: 207.2
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 430..525 e-value: 1.5E-11 score: 46.1
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 403..424 e-value: 0.019 score: 15.0 coord: 235..254 e-value: 0.17 score: 12.1 coord: 376..395 e-value: 0.14 score: 12.3 coord: 344..367 e-value: 0.032 score: 14.3
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 34..128 e-value: 1.0E-34 score: 118.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G003080.1	CmaCh08G003080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding