CmaCh08G002190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G002190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	spindle and kinetochore-associated protein 1 homolog
Location	Cma_Chr08: 1232341 .. 1239556 (+)
RNA-Seq Expression	CmaCh08G002190
Synteny	CmaCh08G002190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCCACTTCTCAGCAACCCGCCCTTTCTCCATTTCTCAGCAACCGGCTCTCTCTCACACTCCTCGCTCATCATTGTTTCTTGAAATTCTCCTCTTTCATCCGGTAAGATCTGATGTGTAATTTCTACACTCGTGATAGCGAACTTTATCTCATGCTGATTGGTTTGGAATTCATCAACTGCGTTTGTCATTTTCAGTTTTTGCTGTCTTTTGGCATGTTAATTGGTTTAAAGCAGAGGTTCATCGTTGTTACTTTATAAAAGAACATTGAATTTCTGAGAGAATCCTGTGCTTTAATCCTGTTTCTTCAGCCGAAGCTCCCATGTTTGTTGAATTAATTTGTGGTTCGATAATGTCGAATATGCATCTATATTGAGACTGTAACTAAACTAGTTTGCTAATTCACCAATTTCAAGTATTGCACTAAAATTTATCATGCTTTTCTTTGATTTTTATATTTTGGCGATAATTTGATGTTAGTTGAACTAACCATAGATTTCAAGTGCATCTATTCACCAATTTTAGTATTCTACATTTTTATATTGTTGGCATGTTAGTTGAATTAGTGCGGTTACTGATTTTTCTCTTCAGTATTATCTTTCTCAAAGTTGATTTAGAGTTATATTTTTATAAGCTGTAGTTCAGCCTCCTGATGTAGAGTTCTGTTTCTATTCTCTCTGGGTTACCTTGGCACTGCTGACGATTAAATTTGGAAGATTTCGTCAGGATTTTGTTGGTGGAAATTTCTAAACCTTTTGAGATAAAATTTCGTGCGTAAGTTAACATTTGAACATGATTTTTGGAAATGAAAATTCAATGTTTAGAAGATTTTTATTTATTCCTGTCTGTTTAGTGATAAGCTCTATGAATTCTAAGTTGCTTGAGACGAGGGAGTGTTATTAGTTTGACGCCTCTAAAATACTCTCGGGTGCCCACTATTTCTTTTTATTGCATGGTCATTTTATCCTGTTTGGACAGATCTGACCTCACTAGCAAAGCAACTTGGTGGTGAAATGAACTATTTATTGGTCTTTCTCCCTTTTATATTCATCAGGACTAAGAACATTAGCAGCTTTACCAATTTCCATTAGTGATCTGCATTGTACACTTGGTGGTGAAATGAACTATTTATTGGTCTTTCTCCCTTTTATATTCATCAGGACTAAGAACATTAGCAGCTTTACCAATTTCCATTAGTGATCTGCATTGTATTTGAAGAATATATCTTCTACTAGAAACAAAATGAAGGTCAAAAGATCCTACTTGATTTGTTATAGATCAGATTGTTTTTGTTGCTAATTCAGGTTGGTCTGATTCTCAGTGTTGTATACCGTTTAGGATGTTCAAGATTTAGTCCTGGAGCTGGTCTAAATAAACTTCTTTTGCTGTGAAGCTTGTTTTAGATTTTGAAGTATGGAAATTTGATATTATGATTGTGACTTAATTCTCACTTGATACATCATTTATGCGTACACCTTTTGAGTTTTTATCTCTAATTAGACTGCATATGGCATCAATATGGCTTACACATCTGTCTCTCAAATTTTTCTCCATAATTGATTCATGTTCCATTGTTGCTTTGCTAGGATGCTGTTATGGTCAATTACGGCGTTTGAATTGTTTTTGGTTAAATTAATTAATTCAAGGTTTGTTTTTGACGTCAAAAAATATAAAGTTCGTACAGCGACAATCCTTTGAATCCTTTAGAAAATTGGCCTTTTAATATCATTCTGCTTTAATGGTGAGGGTGTTTAGCCAATTTTCACTCTCAAGTTTCAAATTTCTAGTCGTTCATCTTTTTTAAAAAACTCGTGGACTAACAAATCTATGTAACTCAAGCTTCAGAGCTGCACAATTTTTACATAGAGGGGAGATAGATGGACTTGAAAGAAGCTGGTTCATTGCTTAATAATCTAGTTGCTGCTTTCAATGGTCGGATCGCGGAGCTCCAAGATCTCGTAATTGCACGAAATAGTGAGCGGAAATATTTAAGCCTTTATTCTTTTTCTTGGCTATAATTCTATTTGATGCATAAATGTCACCACTGCGGGATTGACTTCTGTTGTCGTAGTGTATCCGGCGAGTTGTATCCCTGATTTGTCGGCAGTTGATGCATCATTGAAGGCAATGGAGTTGCAGGTGCAGGCAATCAAGAACCAGTTACAAGAAGAAGCTGAAGCAATTCCCAAAGCGAAAGTATATTCGCCCCTCCCTCTTTAGACCATCCTTCTGCTAATTAAATTCTGTTTGCTCCTTTTCCTCTGCATAATTAGGAAACCATAAGAAATTAGTGAAAGAATGTTAGAAATGTGTTTACCTCAAATAAATAACATATTCAGTCTGAAAGAGTTTTGAAAAAATTGGGAGAATTGATAACCCAAAAAACTCGAGCAATAAAATTCCCATTCCTTGATCTGCAAAATACTTTTAAGATTTATAATTACTGATAAGATAATTACCGATTATTATCATTCTCATGACGCTATGTTTCTCTTTGTAAATTTTGCTGAGCTTTACAGAGTAGTGGGTTTAACAGTTTTAGTGCTGTTTTGAGTGGCCAAATTATTGCTTTGTTGATGTGCAATATAACATTTTTCACCAAATTCTGCAGAAACTTATCGAAGCATCTCTTAAGCAGCAGAAGAGGTTAGAAAGTATATCACTTCACGTTCCCTCGTATCATATTCAGCCCCAAAGAGTTTCTGCGTTGAACTTAAATACCAGGTAACTAATTTGTTTGAAATTTTATAGGAATTCCATGATCTGAACCCCAGCTTCAAGTTTTATTGTTAAGGTAGTTGTGATTCATGAAAAGGTTTTATGGCCTTCTGTTTTCAGTCTTTGTTCACAGGCCAAAAAAACTGATACTGAATTGGGCTCCCTAGAGGCTGAGAATGTGATTTCAGTCTTACCTAAGGTCGGAGTTCTCTTCCTTTAGATATGTTTGTGTAAAATGAATGCATCATACACGTTCATTCCCATATGAACTAGCAAATAGGGCTCAAGTTAGGCATTAAATTTTTCGTGAACCTGAAAGCCATTACCTTGTAGGTTACAATAAACTTAATCTTTCATTTATAATTTTAGTACTTCCCAGCCTCATGGGTTTTAATTAGCACAGTGCTCAATGGGTGATAATTAGAGAGGAAATAAGGTTATTGACCTTCAAATACAGAACTCCTTTTTTGATACGATACTAAATCATAATTGAATTCAAAATCTTAAGTTGATGGAGTATGGTGAATTTAATATTTAATTTATATTCTTAACATTATGGTATGACAAAAAAAATTTAAACTTCTTCCGGAATCATTCTTTTCTTCATCATTAATGTAAAAGTGATCTTTACAATGCAATTTCAGGAGAAGAAAGGTTCCTCTCCACCACTTTGGTACATAACCACCGACGAACTGAATTCACTGTCATCGTGAGTTGTTCTTTCCTCTTATTGGCACGTGAGAATAACTGCTAGCTAGTTCTGCTTACTTACATTCCTAAAATACAATGCACTACGACAGCTCCTGAAATTACTAACTTAGGTATCAGCATTTGAAACTGAAATAAAGCTAATTATACGAAAAAAAGCCCTTCAGCTATGTTGTTAGCTTCCATTTTACGCTAATATTTTGATTTGTTACAAAAAAAAAAAAAAAAAGAAGACATTTCCATCAGCAGTTTCTGTTATAATTAGAATTTTTGAAACGTTAGGGACAAAATTGGAGCCAAATTAATTATACAAAATGTCCCAAACGAGTGTGATTGGTTTCAATCTTTTATTTTCTATTAGACATATTAATGAAGATTGCTAATAAATGTTTATTTATGAAACAAATTAAAACATTGAAAGTTTAAGAAACTTTGAGGACAAAAGTGAAACCAACTACATCCACGTTAGGGACATTTTCTATAATATACCCTTTGAATAATTTTCATGACCGGTAATCTGGTGTTTGGAGTGCATTAAATAGAGCTGAACAATTCGAATATCAAAGAAATAAGAAAGCTGCAAATGTCTTTAGCGTATGTTTTTCCTGTAAAGTAGCATGTAATCCTCTAATTTTTTTTTATTAACTCTTACCAACCACAGATATATGAAAGGAAGGTTGACAGTTGACAAGGTCAATGCTGCTATTAATGACATGGCAACATATGCTGAAGCAAATGCTCAGCTTATTGTCGTCCCAAAGAAGAAGGTTCGTGTTAAATTCTCTCTCTGACTTAACAAGCATATTGATAACCACCACACCACTTATATGCTGACAATGGGTAATTTTTGTGAAGCTGGCTGAGAACCAATGGGAAAAGGCTCTGGTAAGTTTACTTGCAATCTTTCCACATCCGCATCTCTTCTTCTTCCTTTCGCTTCCTTTCAGCATTGACGCTTGCAAAACTTAAGATGTAGCGATGTAGGTTCTAGGCACACTAAAGATTATTACATAATATATTCATTAATATTAATGCATTATATATTGGGAAAACGTCATGTAGAATCATGTGGCGATGTAGGTTCTAGGCACACTAAAGATTATTACATAATATATTCATTTGTATTAATGCATTATATATTGGGAAAACGTCATGTAGAATCATGTGGGTGTTCTGATTGTATTCCTAGTAGATGCTACACAGAGAATTATTTTTCTTGCCCATTTTACTTGAGATCTTAGGAACCCCTTTCTATCTAATTGACAAAACTGGATAGAGGAAAAAAATGTGATTTTGGATGGTTGATCGTCTGCATCCAATCCCAGTTGTAGGCGAGGTGGCAATGGTGGAGGTAGGCAACGAAGAGCACTGTCAAGAGTTGCTTGTAAAATAAGAGAGTTAGACAATAGTATGGTGTTGTCTAATTACTAGGTGGTGCTTTGCAAGTGTTTGGGTTAGGTGAATACGGCGTAGCTAAGTATCGTGGTAGAGTGGTAGCATGCAAATGGTCACCTCTGGGCATCCCACCTTTATCTCTTCGAGCGTTGCGCTAGATTAAGGATGATCGCATTGCATTGGGTGGCCTCGGGCTTATGTTGGGCTAACTTGTGGCTAGGGTACTAATTGGTCAACCCATACAACTTTATGCTCAACCTACTCTATTTTGCTCCTACTAGACCTAGTTGGGCTATAGTCTACAAATTATGATTTTATTGCAAAATTTACCCAAAGCAATTGCTCTTTGCTAGGTGTGTCGGTGGGTGGCGTATGAGGACGAGAAGAGCCTCCCATCCCTGCAAAAGGTCCTCCAAAAGACTCACCTAATCCTTCGTCCTCATACGCCACCCACCGTCAAATTGGTGATTCTCTGAACAGTGTGCACGCTTCATTCTTCGTTCTATCTGTTTCCGTAGACTGCTCACAAAAAGCTATCAAACAACTTGCAACATTGGCATGTCTCATTCTGTCTCTGTGTAAAGGGCACGAAAGCAGAGGTAAACATACCAAATTTTGTCAGATTTTAGACTCTGACTGAATAAGAGCGTCAAAGCGTAGAGCTCTTTTATTATTTTACCAGCAGCAACCCTCCACCAGACTCTCTACCACTACCTTCTACCACAACCTTCACGGTCGAGGATTATTAGGAGTGAATTCCACGTCGGTTAATTTAGTGGAAAATCATGGATTTATAAGTGAGCAATACTATCTCTATTGGTAGGAGGCCTTTTGGGGAAGCTTAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTGTGGAGATCCATGATTCCTAACAGTCACCTTATCTTTGATTGGATTAATGTGCACGCGATGAAACACTGGTTGTTTGTCCAAAATCATGCAACAGCATCCCTTACCCCACTCCTAATGGCAAAAGAATCCCAAACACTGCCCCCATGCTTGCAAATTCTGGAGCAGGGTGGGGTTTGGGTCTTGTGGGGAATTTGTTCCTAATTTGACGGGGAATTCTCGTGCGGTATCTCCATGGGGACAAATCCCATTAGAACCCGATGAGTGTCAACAAGTGTTGCAGCAAATTGATGAGAGCAAACGATGTTTGATGAGTGCAAATGCACCAATATGTGATGGAAAAAAGGGTAGGTGCAGCGAGTAAGTGACAGTAGTGGTGCTTGGTGAGTTGGCGAGAGCAAACAATGTTTGGAGAGTAAGCAAACTGGCTACGATAGGTGGCAGCTGGTAGTGATAACCTTGTTAGCCCTCAAGTCCTCCTGGGCAAGGGCAAATGGTGGAACCAAAGCTCCAAAAAGAAAAAAAGAAGTTAGTCAGTGAAGGAGGAGGAGAAGAAAATGATGATGGGGTTAGGGTTTCAAGTTGAAACTATCTATAACAAATAAAATTATGAACATGGGCTATAAAAAGTGCCTGAATTAATACAAGTAAAGACTAACATTGATCTTGAACACCGTCAAATTGGTGATTCCGATGGGTAACCACAGGGAGTCAGGGATCTGAACCCATGTTTTATTTTTATTTTTTCTAATCTTATCAAGATGTCATGTTTGTATTTCCGGTAAATGCAGGAGCTAAGAGATATTGCAACAACCGAAGCAGTGAAAGGAAAATATTTCTTTCTTGAAACTGACATGCGAGGACCTTCATTGAAACTTGACAACACTGGAAAAGCCATACTAACTGTAAGTTTGTCATATATTATTAGCTCACTAAGCAATCACAGTGATGTTGGGAGAGAATACCATTAAGCAAATAGTAGTGTTATGTTAGGAGATAATACCAAAAGTTCATTCATCTAGTCAATACTTTAGTGTATGTTTTCATCAAAATTCGAAGCTTTTTTCATACCATAGTTCATATTGTACTGTTGATTGATTCTTGAAAAAACTGTCAAATTTTGTGCATCACAGGTCCTTCGACATCTTGGACGCATAAGCGAGACTCGGATTGGACATCAACGCATAATTTTACTTTTAAAACCATCATAAATAGCCTTTCATTCATTTGGACACAAGATTACCAAGTCTTGCATTGAAAGTCAAGAGAATCAGCTGTGTACAACTCTAGCAATCCGTTTCTCAAAGATTAATCCTGGGCAAGGTGAGAACCTCTAACCGATAAACTACATTCTTCTTATGGACAAATTGATAGAATGGTATGAATTATTTGTGGGATTTGGTGTGCCTTTGTCTTCGATTATCATCAAAGGAATCCTTAGATTGAAATGAGATGATAGGATTCCCTATCTTTTTGGAACATATTTCTCATGTGGATCTTGCC

mRNA sequence

TTCTCCACTTCTCAGCAACCCGCCCTTTCTCCATTTCTCAGCAACCGGCTCTCTCTCACACTCCTCGCTCATCATTGTTTCTTGAAATTCTCCTCTTTCATCCGCTTCAGAGCTGCACAATTTTTACATAGAGGGGAGATAGATGGACTTGAAAGAAGCTGGTTCATTGCTTAATAATCTAGTTGCTGCTTTCAATGGTCGGATCGCGGAGCTCCAAGATCTCGTAATTGCACGAAATATGTATCCGGCGAGTTGTATCCCTGATTTGTCGGCAGTTGATGCATCATTGAAGGCAATGGAGTTGCAGGTGCAGGCAATCAAGAACCAGTTACAAGAAGAAGCTGAAGCAATTCCCAAAGCGAAAAAACTTATCGAAGCATCTCTTAAGCAGCAGAAGAGGTTAGAAAGTATATCACTTCACGTTCCCTCGTATCATATTCAGCCCCAAAGAGTTTCTGCGTTGAACTTAAATACCAGTCTTTGTTCACAGGCCAAAAAAACTGATACTGAATTGGGCTCCCTAGAGGCTGAGAATGTGATTTCAGTCTTACCTAAGGAGAAGAAAGGTTCCTCTCCACCACTTTGGTACATAACCACCGACGAACTGAATTCACTGTCATCATATATGAAAGGAAGGTTGACAGTTGACAAGGTCAATGCTGCTATTAATGACATGGCAACATATGCTGAAGCAAATGCTCAGCTTATTGTCGTCCCAAAGAAGAAGCTGGCTGAGAACCAATGGGAAAAGGCTCTGGTGTGTCGGTGGGTGGCGTATGAGGACGAGAAGAGCCTCCCATCCCTGCAAAAGACTGCTCACAAAAAGCTATCAAACAACTTGCAACATTGGCATGTCTCATTCTGTCTCTGTGTAAAGGGCACGAAAGCAGAGGAGCTAAGAGATATTGCAACAACCGAAGCAGTGAAAGGAAAATATTTCTTTCTTGAAACTGACATGCGAGGACCTTCATTGAAACTTGACAACACTGGAAAAGCCATACTAACTGTCCTTCGACATCTTGGACGCATAAGCGAGACTCGGATTGGACATCAACGCATAATTTTACTTTTAAAACCATCATAAATAGCCTTTCATTCATTTGGACACAAGATTACCAAGTCTTGCATTGAAAGTCAAGAGAATCAGCTGTGTACAACTCTAGCAATCCGTTTCTCAAAGATTAATCCTGGGCAAGGTGAGAACCTCTAACCGATAAACTACATTCTTCTTATGGACAAATTGATAGAATGGTATGAATTATTTGTGGGATTTGGTGTGCCTTTGTCTTCGATTATCATCAAAGGAATCCTTAGATTGAAATGAGATGATAGGATTCCCTATCTTTTTGGAACATATTTCTCATGTGGATCTTGCC

Coding sequence (CDS)

ATGGACTTGAAAGAAGCTGGTTCATTGCTTAATAATCTAGTTGCTGCTTTCAATGGTCGGATCGCGGAGCTCCAAGATCTCGTAATTGCACGAAATATGTATCCGGCGAGTTGTATCCCTGATTTGTCGGCAGTTGATGCATCATTGAAGGCAATGGAGTTGCAGGTGCAGGCAATCAAGAACCAGTTACAAGAAGAAGCTGAAGCAATTCCCAAAGCGAAAAAACTTATCGAAGCATCTCTTAAGCAGCAGAAGAGGTTAGAAAGTATATCACTTCACGTTCCCTCGTATCATATTCAGCCCCAAAGAGTTTCTGCGTTGAACTTAAATACCAGTCTTTGTTCACAGGCCAAAAAAACTGATACTGAATTGGGCTCCCTAGAGGCTGAGAATGTGATTTCAGTCTTACCTAAGGAGAAGAAAGGTTCCTCTCCACCACTTTGGTACATAACCACCGACGAACTGAATTCACTGTCATCATATATGAAAGGAAGGTTGACAGTTGACAAGGTCAATGCTGCTATTAATGACATGGCAACATATGCTGAAGCAAATGCTCAGCTTATTGTCGTCCCAAAGAAGAAGCTGGCTGAGAACCAATGGGAAAAGGCTCTGGTGTGTCGGTGGGTGGCGTATGAGGACGAGAAGAGCCTCCCATCCCTGCAAAAGACTGCTCACAAAAAGCTATCAAACAACTTGCAACATTGGCATGTCTCATTCTGTCTCTGTGTAAAGGGCACGAAAGCAGAGGAGCTAAGAGATATTGCAACAACCGAAGCAGTGAAAGGAAAATATTTCTTTCTTGAAACTGACATGCGAGGACCTTCATTGAAACTTGACAACACTGGAAAAGCCATACTAACTGTCCTTCGACATCTTGGACGCATAAGCGAGACTCGGATTGGACATCAACGCATAATTTTACTTTTAAAACCATCATAA

Protein sequence

MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKNQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPQRVSALNLNTSLCSQAKKTDTELGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMATYAEANAQLIVVPKKKLAENQWEKALVCRWVAYEDEKSLPSLQKTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRIILLLKPS

Homology

[Close]

BLAST of CmaCh08G002190 vs. ExPASy Swiss-Prot
Match: Q9LZZ7 (Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g60660 PE=2 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-86
Identity = 183/318 (57.55%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M+  +AGS L++L+A+FN RI ELQ+LVIARNMYPAS IPDLSA+D +L +MELQVQ+IK
Sbjct: 1   MEGNQAGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQSIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPQRVSALNLNTSLC---SQA 120
           ++L+EE EAIPKAKKLIEASLKQQ +L+ +S++ PS+   P + + LN + + C     A
Sbjct: 61  DRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHF--PDKATMLNSDLNRCLLQENA 120

Query: 121 KKTD--TELGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNAA 180
           K+ +  + L SL+ +   +VLPKEKKG  SPPLWYIT +ELNSLSSYM+GRLT++KVNAA
Sbjct: 121 KQYEQHSTLSSLKFDEEAAVLPKEKKGRGSPPLWYITVEELNSLSSYMRGRLTLEKVNAA 180

Query: 181 INDMATYAEANAQLIVVPKKKLAENQWEKALVCRWVAYEDEKSLPSLQKTAHKKLSNNLQ 240
           INDMA+YAEANA LI   K+KLAEN WEKAL                             
Sbjct: 181 INDMASYAEANAHLIAASKQKLAENLWEKAL----------------------------- 240

Query: 241 HWHVSFCLCVKGTKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLG 300
                           +LRDI T +AVKGK+FFLETDM+GPSLKLDNTGKAILTVLRHLG
Sbjct: 241 ----------------KLRDIVTEQAVKGKHFFLETDMKGPSLKLDNTGKAILTVLRHLG 271

Query: 301 RISETRIGHQRIILLLKP 313
           RISETRIG  R+I+L+KP
Sbjct: 301 RISETRIGQNRVIILMKP 271

[Close]

BLAST of CmaCh08G002190 vs. ExPASy Swiss-Prot
Match: B8B624 (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26011 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.5e-66
Identity = 147/316 (46.52%), Postives = 197/316 (62.34%), Query Frame = 0


Query: 2   DLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKN 61
           D    G  L+ + AAF  R+ ELQ+LV+ARNMYPA+ IPDL+AVD SL AME Q+QA++ 
Sbjct: 5   DASRLGESLDAVSAAFQSRVMELQELVLARNMYPATAIPDLAAVDVSLTAMEAQLQAVRR 64

Query: 62  QLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPS------YHIQPQRVSALNLNTSLCS 121
           +LQEE EA PKAKKL++ SLKQQ+RL+ +  ++P+      +    +  S++    SL  
Sbjct: 65  RLQEEREAFPKAKKLVQQSLKQQRRLQLMLANMPTGMREDVFATPLEHNSSMMFPESLNF 124

Query: 122 QAKKTDTELGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAI 181
            +   +     L+ +   +  PK+ +G + P WYI+T+EL+SLSSYM+GRLT++KVN AI
Sbjct: 125 SSAVPEVRDHDLKIKEEPTAPPKKGRGPA-PRWYISTEELDSLSSYMRGRLTLEKVNIAI 184

Query: 182 NDMATYAEANAQLIVVPKKKLAENQWEKALVCRWVAYEDEKSLPSLQKTAHKKLSNNLQH 241
           N++A+YA+ NA L+  PKKKL+E+ WEKALV                             
Sbjct: 185 NEVASYADGNAHLVACPKKKLSEDTWEKALV----------------------------- 244

Query: 242 WHVSFCLCVKGTKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGR 301
                           LRDIA  E+VKGK+FFLETD++GP LKLD TGKAILTVLRHLGR
Sbjct: 245 ----------------LRDIAARESVKGKHFFLETDIKGPGLKLDTTGKAILTVLRHLGR 274

Query: 302 ISETRIGHQRIILLLK 312
             ETRIGH R+ +L K
Sbjct: 305 FQETRIGHHRVFILSK 274

[Close]

BLAST of CmaCh08G002190 vs. ExPASy Swiss-Prot
Match: Q7XAM0 (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0484500 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.2e-66
Identity = 146/316 (46.20%), Postives = 197/316 (62.34%), Query Frame = 0


Query: 2   DLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKN 61
           D    G  L+ + AAF  R+ ELQ+LV+ARNMYPA+ IPDL+AVD SL AME Q+QA++ 
Sbjct: 5   DASRLGESLDAVSAAFQSRVMELQELVLARNMYPATAIPDLAAVDVSLTAMEAQLQAVRR 64

Query: 62  QLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPS------YHIQPQRVSALNLNTSLCS 121
           +LQEE EA PKAKKL++ SLKQQ+RL+ +  ++P+      +    +  S++    SL  
Sbjct: 65  RLQEEREAFPKAKKLVQQSLKQQRRLQLMLANMPTGMREDVFATPLEHNSSMMFPESLNF 124

Query: 122 QAKKTDTELGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAI 181
            +   +     L+ +   +  PK+ +G + P WYI+T+EL+SLSSYM+GRLT++KVN AI
Sbjct: 125 SSAVPEVRDHDLKIKEEPTAPPKKGRGPA-PRWYISTEELDSLSSYMRGRLTLEKVNIAI 184

Query: 182 NDMATYAEANAQLIVVPKKKLAENQWEKALVCRWVAYEDEKSLPSLQKTAHKKLSNNLQH 241
           N++A+YA+ NA L+  PKKKL+E+ WEKAL                              
Sbjct: 185 NEVASYADGNAHLVACPKKKLSEDTWEKAL------------------------------ 244

Query: 242 WHVSFCLCVKGTKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGR 301
                          ELRDIA  E+VKG++FFLETD++GP LKLD TGKAILTVLRHLGR
Sbjct: 245 ---------------ELRDIAARESVKGRHFFLETDIKGPGLKLDTTGKAILTVLRHLGR 274

Query: 302 ISETRIGHQRIILLLK 312
             ETRIGH R+ +L K
Sbjct: 305 FQETRIGHHRVFILSK 274

[Close]

BLAST of CmaCh08G002190 vs. ExPASy Swiss-Prot
Match: B4FGS2 (Spindle and kinetochore-associated protein 1 homolog OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.3e-61
Identity = 137/304 (45.07%), Postives = 190/304 (62.50%), Query Frame = 0


Query: 10  LNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKNQLQEEAEA 69
           L+ + AAF  ++ ELQDLV+AR+M+PA+ +PDL+ VDA + AME QV+ I  +LQEE +A
Sbjct: 13  LDAVAAAFKSQVMELQDLVLARSMFPATALPDLANVDALVTAMESQVETISRRLQEELDA 72

Query: 70  IPKAKKLIEASLKQQKRLESISLHVPSYHIQPQRVSALNLNTS-LCSQAKKTDTELGSLE 129
           IPKAKKL++ SLK++++L+ +  ++PS   +    +    ++S +      + TE    E
Sbjct: 73  IPKAKKLVQRSLKEEEKLQHMLANLPSGMRKNDFANQHEQSSSRMLPHFNSSFTEANECE 132

Query: 130 AENVISVLPKEKKGSSP-PLWYITTDELNSLSSYMKGRLTVDKVNAAINDMATYAEANAQ 189
            +     +   +KG +P P WYI+T+EL+SLSSYM+GRLT++KVN AIN++A+YA+ANA 
Sbjct: 133 LKIKDEPVAAPRKGRAPAPRWYISTEELDSLSSYMRGRLTLEKVNIAINEVASYADANAH 192

Query: 190 LIVVPKKKLAENQWEKALVCRWVAYEDEKSLPSLQKTAHKKLSNNLQHWHVSFCLCVKGT 249
           L+  PKKKL+E+ WEKAL                                          
Sbjct: 193 LVTCPKKKLSEDTWEKAL------------------------------------------ 252

Query: 250 KAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRII 309
              ELRDIA + AVKG +FFLE D++GP LKLDNTGKAILTVLRHLGR  E RIGH R+ 
Sbjct: 253 ---ELRDIAASGAVKGNHFFLEADIKGPGLKLDNTGKAILTVLRHLGRFHEVRIGHHRVF 271

Query: 310 LLLK 312
           +L K
Sbjct: 313 ILSK 271

[Close]

BLAST of CmaCh08G002190 vs. ExPASy Swiss-Prot
Match: Q96BD8 (Spindle and kinetochore-associated protein 1 OS=Homo sapiens OX=9606 GN=SKA1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-08
Identity = 72/301 (23.92%), Postives = 130/301 (43.19%), Query Frame = 0


Query: 6   AGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPD-LSAVDASLKAMELQVQAIKNQLQ 65
           A S L  L +  N +I  ++  +  RN      +   L+ +   +  +   +  ++ ++Q
Sbjct: 2   ASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQ 61

Query: 66  EEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPQRVSALNLNTSLCSQAKKTDTEL 125
            + +     K+L E+  +  K +E +  +VPS H+    V      T  C +    D E 
Sbjct: 62  YQEQTNNSLKELCESLEEDYKDIEHLKENVPS-HLPQVTV------TQSCVKGSDLDPEE 121

Query: 126 G-SLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMATYAE 185
              +E    +   PKE++ S   + +IT DE N + SYMK RLT +++N  I ++     
Sbjct: 122 PIKVEEPEPVKKPPKEQR-SIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEI----- 181

Query: 186 ANAQLIVVPKKKLAENQWEKALVCRW-VAYEDEKSLPSLQKTAHKKLSNNLQHWHVSFCL 245
                              KA++ ++ + ++ +KS+ S        ++ NL H  +    
Sbjct: 182 ------------------NKAVISKYKILHQPKKSMNS--------VTRNLYHRFID--- 241

Query: 246 CVKGTKAEELRDIATTEAVKGKYFFLETDMRG-PSLKLDNTGKAILTVLRHLGRISETRI 303
                  EE +D       KG+YF +E D++   +LK D     +L +LRH  R+SE R 
Sbjct: 242 -------EETKD------TKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRRLSEVRG 247

[Close]

BLAST of CmaCh08G002190 vs. TAIR 10
Match: AT3G60660.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395 (InterPro:IPR009829); Has 131 Blast hits to 131 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 320.1 bits (819), Expect = 2.0e-87
Identity = 183/318 (57.55%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M+  +AGS L++L+A+FN RI ELQ+LVIARNMYPAS IPDLSA+D +L +MELQVQ+IK
Sbjct: 1   MEGNQAGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQSIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPQRVSALNLNTSLC---SQA 120
           ++L+EE EAIPKAKKLIEASLKQQ +L+ +S++ PS+   P + + LN + + C     A
Sbjct: 61  DRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHF--PDKATMLNSDLNRCLLQENA 120

Query: 121 KKTD--TELGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNAA 180
           K+ +  + L SL+ +   +VLPKEKKG  SPPLWYIT +ELNSLSSYM+GRLT++KVNAA
Sbjct: 121 KQYEQHSTLSSLKFDEEAAVLPKEKKGRGSPPLWYITVEELNSLSSYMRGRLTLEKVNAA 180

Query: 181 INDMATYAEANAQLIVVPKKKLAENQWEKALVCRWVAYEDEKSLPSLQKTAHKKLSNNLQ 240
           INDMA+YAEANA LI   K+KLAEN WEKAL                             
Sbjct: 181 INDMASYAEANAHLIAASKQKLAENLWEKAL----------------------------- 240

Query: 241 HWHVSFCLCVKGTKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLG 300
                           +LRDI T +AVKGK+FFLETDM+GPSLKLDNTGKAILTVLRHLG
Sbjct: 241 ----------------KLRDIVTEQAVKGKHFFLETDMKGPSLKLDNTGKAILTVLRHLG 271

Query: 301 RISETRIGHQRIILLLKP 313
           RISETRIG  R+I+L+KP
Sbjct: 301 RISETRIGQNRVIILMKP 271

The following BLAST results are available for this feature:

BLAST of CmaCh08G002190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZZ7	2.8e-86	57.55	Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana OX=...	[more]
B8B624	2.5e-66	46.52	Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indi...	[more]
Q7XAM0	4.2e-66	46.20	Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japo...	[more]
B4FGS2	5.3e-61	45.07	Spindle and kinetochore-associated protein 1 homolog OS=Zea mays OX=4577 PE=2 SV...	[more]
Q96BD8	4.0e-08	23.92	Spindle and kinetochore-associated protein 1 OS=Homo sapiens OX=9606 GN=SKA1 PE=...	[more]

BLAST of CmaCh08G002190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60660.1	2.0e-87	57.55	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..69
IPR009829	Spindle and kinetochore-associated protein 1	PFAM	PF07160	SKA1	coord: 248..303 e-value: 3.8E-21 score: 76.1 coord: 20..208 e-value: 1.7E-49 score: 168.9
IPR009829	Spindle and kinetochore-associated protein 1	PANTHER	PTHR28573	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1	coord: 247..312 coord: 4..211
IPR042031	SKA1 microtubule binding domain	GENE3D	1.10.10.1890		coord: 146..309 e-value: 3.6E-32 score: 113.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G002190.1	CmaCh08G002190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
molecular_function	GO:0008017	microtubule binding