CmaCh08G000750 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G000750
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclin-dependent kinase inhibitor 3-like
Location	Cma_Chr08: 397008 .. 401671 (+)
RNA-Seq Expression	CmaCh08G000750
Synteny	CmaCh08G000750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTATAAACTGAAATTTCTATGTTTGTTCCCATGCCGAATAAAAAGAATAGGCGTTAAAAACTTCTCATCTTTGTACAGAATAGGCGTTAAAAGGATCCCTTATCTTCAATTTCAGCTGCTGCTTCTTGAATATGTACAGGCAGTGGACAGGCACCTGGGGCTGGTTTCTTGTTAAATAACAACACCCAACTTGTGGTATGTATGCTGCGTTCATTCATATGACATTTTCTGACCAAATTTCTATAGTTTCTGGTGTTCTTGTGTCAAGAATTGTTTCCTATTGTGATGCCCAGGTAACAAAAATATTTTCATACGTACTCGAGTTATAGACTCGAGTAATACAGCCTCCATATTTTCTTTTTAGTTCAACATGTGTGGGTAATCTCGATCGAGAGGAAATGTTTTAACGAGTTGAGCTGCTTAAATTAGTCTCATCTCGATTGGGAGGATATTTCTTACGAGTTGAGCTATGTTCAAGTATACAATTGATTATATTGTTTCATCGTTTTTCAATTTAGTTTATAAAAATGAGGTTTTTATTATTATACAAGGTTAAAATTAATGGTCATAAATATAAAATTTTATAAAGTGTAAATGTTGGCATATTAGTAAATATAATACATTAAGAGAAAGAATTGGAGGGAAAATTATGAGGAGCTTGACATTTTGTATTTTGCATAGGTTTGTGTGATGAATGACTACAAATTTTGGTACATTTTAAAGCCCTAAATTTAGCTAAAAAGGCCTATTCTTTTTTTTTTTTTTTAATTTTTTAAATATACTTCATATAATTTAATTTTAGTTTAATTGATTAAAAAATAAATCATAAATGCATTTGGTTATTTTTTAAAATTAAAATAATATTACAAATTTTAAAGAAAGAAAAATAACATGTTTTGTAAATTGAAATTTTATATGAAGAGACTAAGCGATAATTTGGATTACCAACTAAGACCCCTAAATGATCGCTCGATAGGGGTAAAATAGTAATAATATAAGCCGATTTAATATATATATATTATATATAGAAAATACATGAAAAGAGAAAACAGAAAAGAAAATTGTATATGATTGTTTTGCTTGTCCGTTTTCCCTCCCCCGCCCACTTTCTTCTTCTTCCTCTTCCCTCTTCTTTTTTCCCTTACAAATTTTCAATTCCTCTTCTTCTCTCCTCTCTCTCTCGCTCTAAAACCTCTCTCATCTTCTCATTCTCTGAAACCTCGAAGCTCTGAATCCTATGACAAAATGGGCAAGTACATGAACAAATCCAAGATCGCCGGCGATATCACAGTCATGGAGGTCTTCTCACAGCCCACCACGACCACTGTCCGCACCAGAGCCGCTTCCAAATCCCTCGCATTGCAGAAACTGCAGAAATCCTCCCTTCCAGACGCCATTCCCGACCTCTCCTTCTCCTATCTCCAGCTCCGCACCCGCCGCCTCGATAAAACCAACAGGTCCATTGGGGCTTCCGCCAAACAGACATCAAAACCTAAGAAGTCTGCTCGCAGTTCCAGTTCCTCCGTGAAAACAACCTCTAATTTGGACTGTGAGAGCCAGATTGTTGGCTTTGAATCTCAGGCTGAGAATTTGAAGTTCGAAATCTCAAGAAGGTACATTTCTGTTCTGCTGCTTCAATCGTGATTCTGAAATTAGTTTAGTGGATTAGTTTTTTTTTTTCGTTAGTATTTGTTTTTTTTTAAAAAAAAAAAATTGGCTAAGATTTCAAAAGTCTTTTGAAGAAGTAAAATATACTAAAGAAAACACATATATATGTATATGCAGATACAGTAGTGTTCAAAACATGCCCTAAAACTTTTGAACTTTCTTCTTCATAAACTTAGGCCTCTCTTTTACCTTCTAGCGGTTCGTGGATTATTTATATTCTTTCACATAATTTAATCTTACATGTATCCAAACATTGGAAATTCTTCCTGTTTATTGATTTTGAATTCTGTTCTTGCTGGGATCAATACTTTAATATGTTTGGGCTGTAGAGCTACCAATTGCATTTATTTTTTGCCATACGTTATTCAAAATTTTCTCTGCCGTAATTTTTGCTTTAAATTGGTTTATTGTCCTTTTGCATATGGAAGCTTCAAAAAATTTGGTAAACCACTCTGTTGCTTTGCAGTTCCTTGCCGAAAGATGTTTTGTTTTTAGTTTACATAAATTTAAATTGTCTTTGATTACTCATTCAAATTATGATAGATTTGGTATGTTCTGTGTATCATCGTTTTCAGAAATAGAAAACCAGAAACAAAAACTTTGTCAGTTGTCAATTGGGTCTTTAATATTTTGCTTGATTTTGTTGTCCACAGTGCTAGGGAGAATTTAATTATCATTTGAGTCTTTTCCTCCTCCAATATTATAATACTTTAGCCAATATAAACTAAACTATTAAGGTACCTACTCCTTTATTTAACGTCAAAGGTTCAAATATTCCCATTTCTAACTATTTTGTACTACAATTACAAAGAAAGTTCTAATTATGTATTTGCCACCATAGATTCGGAGAAACAAAAACATATTAATAGATAAGAACATAATACAGCCAATTTCCAAAAAAAAAAAAAAAAAAAAAANAAGAACATAATACAGCCAATTTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTAAAATAGCTTGATACCTTAAATCGATCAAGACATCATAATTTAGATAAATCATCTTACCTATTTTTCCTGAACCCTTCTTTTTTCCTTTCTTTATCATGATATTAGTTGAAAAGAGATTCAATTTAGAAGTTTTATGATATTGTGTTATTAGAAACAATTATGTGGTATTCAGAAAATCCATAAAGTCAATGACGTTATATTCATTTGCAATGACATATCATTTTCACGGGGCCTAGATATGTCCCAGAACATGTATCATGGGATGCCTCTGTGTTGATGATGCTTTCTCTAGCTAACAAGCAGTTATTACAACTTTTTCTTTTGGTATTCTGCTGCTGCCAGTTGACACTGATTTTGTCCTATTAGATTCATTGCTTCTTTGCCACTAACTTTATGTGTTTTTTTTTTTTACTCTGTATATCTAAGAGCTAGCATAAATGTGGAATGTATATACAGGCCCCTTGGTGATAATTTTAATTTCGGTTTTTCTTTTTCTTTTATTTACTACTGTTTTAGCTTTTAAAAAAAGTAAGATTATTTATTGTAGTTGTTTATTTTATTTTTGTTTGAGTATTAAATTACCAAGTTAGTCTCTTTTGTTTGTGTGAATCTCAGTCCTTTCAATTTGGTCTTATGATTTGGTTAAATCTCTCAAAAGCCTTATAGCATTACTACAAAAAAAACAATGTTTTGATAGTAATAGTCATGGGCATTTTTGAAAGACACCTAAATTTTATGGACCAAATTAAAAGTTTTAAAGCTAGAGAGATCAAATTGAAATCAAACAGAAACAATAATTCTACCTTTTATGTTTTACTTCGAAAAAAATGTGGCTAGAATTTTAACAATGTTTTCCAAAAGTAAATTTGAGTCAAATGGATCACAAGCATAGATGGTTATTATTTAAGAACAAAAAACTAAGATCAAAATCCTTATGAACACGGGCCTTCATTGTTTGTGGATTTAAAATGATATTCAATTCCTTTGTCTGTACAGGGGTGCAAGTGAAAGCACGGCGGACAACCTGCAAAGAACCATCACACCAGCACAAGAGATTGAAGAGTTCTTTGCCTCCGCAGAGCACCAGCAACGGAGATCATTTATTGACAAGTATTTATTCTGCTCAAAATACTTCCTCTACAACCATTAAAGTTTTTGACTTAAACATTATCTAAAACTGAGATGGTCTTCCCTGTTTAGTGTTACTATTGAGAATACGATAGATGCGAGCAGAGTGGAAGCATTTGATGGTTGTGGAAAACTTTCTTACAAGCCCCCCCTGAATGATTGTGTATAGGTACAATTATGATATTGTAAACGACAAGCCTCTCGATGGACGATACGAATGGGTGGAACTGGTGCCTTGAGCTTCTCGAGAAAGGCGGGAGGCCATTGCCAAGGAAGTGGTGGGAAGAGGGAAGAGGGAAGAGGGAAGATTGAAGACAGCTCCAGCTGGGAAGAGGTATGATGATACTACCAAACTATCTGTTGTGTGTGTGGAGAGAGGCTGGAAATTTTGCAGAGATGAGTATGAAAAAGGCAGTGTCCTTTGTGGAAAAAGTAGGACTGAACACAAAGGGTGGGGGGGTCCTTGGGAAGGGCACACTGCTCACCTGCTATCTATAGGGTCCCATGGGGTCTGTTCTCAGCTCTGCCTTTTTAACTTTCCTCTTTTGCCTGTTTTTTTTTTTTTTCAAAAGAAAAAAAAGAGCCTGAGATGTTGCGTGTTGATTGCATAGGATGCCAGTCTGAAGTAGTTCCTTTTTTTATCTCATCTATCTTTCAACAACATTTCGTTTTCAGATGTAATGTTTATCTTTCACATTTTCCCCCTCTTCTCTCTCTCATCATACTCTCTCTTTTAACTCACTCTCTCCTCTCATTCTATCAACATGTTTTTAGGAACTACGATCCTCTACGATGATATTATATTGTTCACTTTGAGCATAAGTTCTTGTGACGATGATATTATATCGTCCACTTTGAGTGTAAGCTTTTGTGGCTTTCTTTTTTGTTTCCCA

mRNA sequence

ATGATCTATAAACTGAAATTTCTATGTTTGTTCCCATGCCGAATAAAAAGAATAGGCGTTAAAAACTTCTCATCTTTGTACAGAATAGGCGTTAAAAGGATCCCTTATCTTCAATTTCAGCTGCTGCTTCTTGAATATGTACAGGCAGTGGACAGGCACCTGGGGCTGTTTCTGGTGTTCTTGTGTCAAGAATTGTTTCCTATTGTGATGCCCAGCTCTGAATCCTATGACAAAATGGGCAAGTACATGAACAAATCCAAGATCGCCGGCGATATCACAGTCATGGAGGTCTTCTCACAGCCCACCACGACCACTGTCCGCACCAGAGCCGCTTCCAAATCCCTCGCATTGCAGAAACTGCAGAAATCCTCCCTTCCAGACGCCATTCCCGACCTCTCCTTCTCCTATCTCCAGCTCCGCACCCGCCGCCTCGATAAAACCAACAGGTCCATTGGGGCTTCCGCCAAACAGACATCAAAACCTAAGAAGTCTGCTCGCAGTTCCAGTTCCTCCGTGAAAACAACCTCTAATTTGGACTGTGAGAGCCAGATTGTTGGCTTTGAATCTCAGGCTGAGAATTTGAAGTTCGAAATCTCAAGAAGGGGTGCAAGTGAAAGCACGGCGGACAACCTGCAAAGAACCATCACACCAGCACAAGAGATTGAAGAGTTCTTTGCCTCCGCAGAGCACCAGCAACGGAGATCATTTATTGACAAGTACAATTATGATATTGTAAACGACAAGCCTCTCGATGGACGATACGAATGGGTGGAACTGGTGCCTTGAGCTTCTCGAGAAAGGCGGGAGGCCATTGCCAAGGAAGTGGTGGGAAGAGGGAAGAGGGAAGAGGGAAGATTGAAGACAGCTCCAGCTGGGAAGAGGTATGATGATACTACCAAACTATCTGTTGTGTGTGTGGAGAGAGGCTGGAAATTTTGCAGAGATGAGTATGAAAAAGGCAGTGTCCTTTGTGGAAAAAGTAGGACTGAACACAAAGGGTGGGGGGGTCCTTGGGAAGGGCACACTGCTCACCTGCTATCTATAGGGTCCCATGGGGTCTGTTCTCAGCTCTGCCTTTTTAACTTTCCTCTTTTGCCTGTTTTTTTTTTTTTTCAAAAGAAAAAAAAGAGCCTGAGATGTTGCGTGTTGATTGCATAGGATGCCAGTCTGAAGTAGTTCCTTTTTTTATCTCATCTATCTTTCAACAACATTTCGTTTTCAGATGTAATGTTTATCTTTCACATTTTCCCCCTCTTCTCTCTCTCATCATACTCTCTCTTTTAACTCACTCTCTCCTCTCATTCTATCAACATGTTTTTAGGAACTACGATCCTCTACGATGATATTATATTGTTCACTTTGAGCATAAGTTCTTGTGACGATGATATTATATCGTCCACTTTGAGTGTAAGCTTTTGTGGCTTTCTTTTTTGTTTCCCA

Coding sequence (CDS)

ATGATCTATAAACTGAAATTTCTATGTTTGTTCCCATGCCGAATAAAAAGAATAGGCGTTAAAAACTTCTCATCTTTGTACAGAATAGGCGTTAAAAGGATCCCTTATCTTCAATTTCAGCTGCTGCTTCTTGAATATGTACAGGCAGTGGACAGGCACCTGGGGCTGTTTCTGGTGTTCTTGTGTCAAGAATTGTTTCCTATTGTGATGCCCAGCTCTGAATCCTATGACAAAATGGGCAAGTACATGAACAAATCCAAGATCGCCGGCGATATCACAGTCATGGAGGTCTTCTCACAGCCCACCACGACCACTGTCCGCACCAGAGCCGCTTCCAAATCCCTCGCATTGCAGAAACTGCAGAAATCCTCCCTTCCAGACGCCATTCCCGACCTCTCCTTCTCCTATCTCCAGCTCCGCACCCGCCGCCTCGATAAAACCAACAGGTCCATTGGGGCTTCCGCCAAACAGACATCAAAACCTAAGAAGTCTGCTCGCAGTTCCAGTTCCTCCGTGAAAACAACCTCTAATTTGGACTGTGAGAGCCAGATTGTTGGCTTTGAATCTCAGGCTGAGAATTTGAAGTTCGAAATCTCAAGAAGGGGTGCAAGTGAAAGCACGGCGGACAACCTGCAAAGAACCATCACACCAGCACAAGAGATTGAAGAGTTCTTTGCCTCCGCAGAGCACCAGCAACGGAGATCATTTATTGACAAGTACAATTATGATATTGTAAACGACAAGCCTCTCGATGGACGATACGAATGGGTGGAACTGGTGCCTTGA

Protein sequence

MIYKLKFLCLFPCRIKRIGVKNFSSLYRIGVKRIPYLQFQLLLLEYVQAVDRHLGLFLVFLCQELFPIVMPSSESYDKMGKYMNKSKIAGDITVMEVFSQPTTTTVRTRAASKSLALQKLQKSSLPDAIPDLSFSYLQLRTRRLDKTNRSIGASAKQTSKPKKSARSSSSSVKTTSNLDCESQIVGFESQAENLKFEISRRGASESTADNLQRTITPAQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVELVP

Homology

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BLAST of CmaCh08G000750 vs. ExPASy Swiss-Prot
Match: Q9FKB5 (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=KRP3 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.8e-23
Identity = 96/227 (42.29%), Postives = 124/227 (54.63%), Query Frame = 0


Query: 79  MGKYMNKSKIAGDITVMEVFSQPTTTT--VRTRAASKSLALQKLQKSSLPDAIPDLSFSY 138
           MGKYM KSKI GDI+VMEV S+ T  +  VRTRAA K+LAL++L  S+   A+P+ S  Y
Sbjct: 1   MGKYMKKSKITGDISVMEV-SKATAPSPGVRTRAA-KTLALKRLNSSAADSALPNDSSCY 60

Query: 139 LQLRTRRLDKTNRSIGASAKQTSKPKKSARSSSSS-----------VKTTSNLD-CESQI 198
           LQLR+RRL+K +  I    KQ  +  +S    S S           V  +SN D C    
Sbjct: 61  LQLRSRRLEKPSSLI--EPKQPPRVHRSGIKESGSRSRVDSVNSVPVAQSSNEDECFDNF 120

Query: 199 VGFE-SQAEN-LKFEISRRGASEST----ADNLQRTITP--------------------- 258
           V  + S  EN L FE SR    EST     ++++  +TP                     
Sbjct: 121 VSVQVSCGENSLGFE-SRHSTRESTPCNFVEDMEIMVTPGSSTRSMCRATKEYTREQDNV 180

Query: 259 ---AQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVELVP 262
                E+EEFFA AE QQ+R F++KYN+DIVND PL GRYEWV++ P
Sbjct: 181 IPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]

BLAST of CmaCh08G000750 vs. ExPASy Swiss-Prot
Match: Q9LRY0 (Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KRP5 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.6e-18
Identity = 83/208 (39.90%), Postives = 110/208 (52.88%), Query Frame = 0


Query: 79  MGKYMNKSKIAGDITVMEVFSQPTTTTVRTR-AASKSLALQKLQKSSLPDAIPDLSFSYL 138
           MGKY+ KSK+AG ++V +  S P     RTR AA+K+LAL +L+  S  D     SF+YL
Sbjct: 1   MGKYIKKSKVAGAVSVKDK-SHPPALGFRTRAAAAKNLALHRLRSHS--DEAD--SFNYL 60

Query: 139 QLRTRRLDKTNRSIGASAKQTSK--------PKKSARSSSSSVK------TT-------- 198
           QLR+RRL K         +Q  +          K+ R+SS   K      TT        
Sbjct: 61  QLRSRRLVKLPLLTNTRKQQKQQLIPSVNQCQTKNPRASSGPAKKLEPDTTTEEACGDNE 120

Query: 199 --SNLDCESQIVGFESQAENLKFEISRRGASESTADNLQRTITPAQEIEEFFASAEHQQR 258
             S  DC     GF+ ++EN      R   S+S +           EIE+FFASAE QQ+
Sbjct: 121 RISRSDCNFGDKGFDLESEN------RSMISDSKSIQ--------SEIEDFFASAEQQQQ 180

Query: 259 RSFIDKYNYDIVNDKPLDGRYEWVELVP 262
           R FI KYN+DIV+D PL GRYEWV+++P
Sbjct: 181 RFFIQKYNFDIVSDNPLPGRYEWVKVMP 189

[Close]

BLAST of CmaCh08G000750 vs. ExPASy Swiss-Prot
Match: Q7XDH8 (Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP4 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.2e-12
Identity = 74/217 (34.10%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 79  MGKYMNKSK--IAGDI---TVMEVFSQPTTTTVRTRAASKSLALQKLQKSSLPDAIPDLS 138
           MGKYM K+K  ++G++    VME+ + P    VRTRA  +SLALQK Q            
Sbjct: 1   MGKYMRKAKVVVSGEVVAAAVMELAAAP--LGVRTRA--RSLALQKRQGG---------- 60

Query: 139 FSYLQLRTRRLDKTNRSIGASAKQTSKPKKSARSSSSSVKTTSNLDCESQIVGFESQAEN 198
             YL+LR+RRL+K              P++ A +++++   T+    E+++       EN
Sbjct: 61  -EYLELRSRRLEK------LPPPPPPPPRRRATAAAATADATAAESAEAEV---SFGGEN 120

Query: 199 -LKFEISRRGASESTADNLQR-----------------------------TITPAQ-EIE 258
            L+ E   R   E+T  +L R                              I PA  E+E
Sbjct: 121 VLELEAMERNTRETTPCSLIRDPDTISTPGSTTRRSHSSSHCKVQTPVRHNIIPASAELE 180

Query: 259 EFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVEL 260
            FFA+ E +QR++FIDKYN+D VND PL GR+EWV+L
Sbjct: 181 AFFAAEEQRQRQAFIDKYNFDPVNDCPLPGRFEWVKL 193

[Close]

BLAST of CmaCh08G000750 vs. ExPASy Swiss-Prot
Match: Q283L0 (Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP5 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.5e-12
Identity = 69/224 (30.80%), Postives = 106/224 (47.32%), Query Frame = 0


Query: 79  MGKYMNKSKIAGDITVMEVFSQPTTTTVRTRAASKSLALQKLQKSSL--------PDAIP 138
           MGKYM K K++G++ VMEV        VRTR  S++LALQ+   S          P A  
Sbjct: 1   MGKYMRKGKVSGEVAVMEVGG--ALLGVRTR--SRTLALQRTTSSQKPPEKGEGDPGAGA 60

Query: 139 DLSFSYLQLRTRRLDK-TNRSIGASAKQTSKPKKSARSSS----SSVKTTSNLDCESQIV 198
                YL+LR+RRL+K    +  A  K+T++   +A +++    ++ +     + E + V
Sbjct: 61  GAGAEYLELRSRRLEKPPPHTPPAKEKETARRASAAAAAAVRMPAAPQAAEEFEAEVE-V 120

Query: 199 GFESQAENLKFEISRRGASESTADNLQRT------------------------------I 258
            F     +L  +   R   E+T  +L R+                              +
Sbjct: 121 SFGDNVLDLDGDAMERSTRETTPCSLIRSSEMISTPGSTTKTNTSISSRRRMETSVCRYV 180

Query: 259 TPAQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVEL 260
             + E+EEFFA+AE QQ ++F ++YN+  VND PL GRYEW  L
Sbjct: 181 PSSLEMEEFFAAAEQQQHQAFRERYNFCPVNDCPLPGRYEWTRL 219

[Close]

BLAST of CmaCh08G000750 vs. ExPASy Swiss-Prot
Match: Q2R185 (Cyclin-dependent kinase inhibitor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP3 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 217 PAQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVELVP 262
           P  EIE FFA+AE  +RR F +KYNYDI  D+PL GRYEW   VP
Sbjct: 170 PEAEIEAFFAAAELAERRRFAEKYNYDIALDRPLQGRYEWEPTVP 214

[Close]

BLAST of CmaCh08G000750 vs. TAIR 10
Match: AT5G48820.1 (inhibitor/interactor with cyclin-dependent kinase )

HSP 1 Score: 109.8 bits (273), Expect = 3.4e-24
Identity = 96/227 (42.29%), Postives = 124/227 (54.63%), Query Frame = 0


Query: 79  MGKYMNKSKIAGDITVMEVFSQPTTTT--VRTRAASKSLALQKLQKSSLPDAIPDLSFSY 138
           MGKYM KSKI GDI+VMEV S+ T  +  VRTRAA K+LAL++L  S+   A+P+ S  Y
Sbjct: 1   MGKYMKKSKITGDISVMEV-SKATAPSPGVRTRAA-KTLALKRLNSSAADSALPNDSSCY 60

Query: 139 LQLRTRRLDKTNRSIGASAKQTSKPKKSARSSSSS-----------VKTTSNLD-CESQI 198
           LQLR+RRL+K +  I    KQ  +  +S    S S           V  +SN D C    
Sbjct: 61  LQLRSRRLEKPSSLI--EPKQPPRVHRSGIKESGSRSRVDSVNSVPVAQSSNEDECFDNF 120

Query: 199 VGFE-SQAEN-LKFEISRRGASEST----ADNLQRTITP--------------------- 258
           V  + S  EN L FE SR    EST     ++++  +TP                     
Sbjct: 121 VSVQVSCGENSLGFE-SRHSTRESTPCNFVEDMEIMVTPGSSTRSMCRATKEYTREQDNV 180

Query: 259 ---AQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVELVP 262
                E+EEFFA AE QQ+R F++KYN+DIVND PL GRYEWV++ P
Sbjct: 181 IPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]

BLAST of CmaCh08G000750 vs. TAIR 10
Match: AT5G48820.2 (inhibitor/interactor with cyclin-dependent kinase )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 90/244 (36.89%), Postives = 122/244 (50.00%), Query Frame = 0


Query: 79  MGKYMNKSKIAGDITVMEVFSQPTTTT--VRTRAASKSLALQKLQKSSLPDAIPDLSFSY 138
           MGKYM KSKI GDI+VMEV S+ T  +  VRTRAA K+LAL++L  S+   A+P+ S  Y
Sbjct: 1   MGKYMKKSKITGDISVMEV-SKATAPSPGVRTRAA-KTLALKRLNSSAADSALPNDSSCY 60

Query: 139 LQLRTRRLDKTNRSIGASAKQTSKPKKSARSSSSS-----------VKTTSNLD------ 198
           LQLR+RRL+K +  I    KQ  +  +S    S S           V  +SN D      
Sbjct: 61  LQLRSRRLEKPSSLI--EPKQPPRVHRSGIKESGSRSRVDSVNSVPVAQSSNEDECFDNF 120

Query: 199 ------CESQIVGFESQAENLKF------------EISRRGASESTADNLQRTITP---- 258
                 C    +GFES+   + F              +R     +  ++++  +TP    
Sbjct: 121 VSVQVSCGENSLGFESRHRFVVFFFFFLFFMFPLLVCTRESTPCNFVEDMEIMVTPGSST 180

Query: 259 --------------------AQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWV 262
                                 E+EEFFA AE QQ+R F++KYN+DIVND PL GRYEWV
Sbjct: 181 RSMCRATKEYTREQDNVIPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWV 240

[Close]

BLAST of CmaCh08G000750 vs. TAIR 10
Match: AT3G24810.1 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-19
Identity = 83/208 (39.90%), Postives = 110/208 (52.88%), Query Frame = 0


Query: 79  MGKYMNKSKIAGDITVMEVFSQPTTTTVRTR-AASKSLALQKLQKSSLPDAIPDLSFSYL 138
           MGKY+ KSK+AG ++V +  S P     RTR AA+K+LAL +L+  S  D     SF+YL
Sbjct: 1   MGKYIKKSKVAGAVSVKDK-SHPPALGFRTRAAAAKNLALHRLRSHS--DEAD--SFNYL 60

Query: 139 QLRTRRLDKTNRSIGASAKQTSK--------PKKSARSSSSSVK------TT-------- 198
           QLR+RRL K         +Q  +          K+ R+SS   K      TT        
Sbjct: 61  QLRSRRLVKLPLLTNTRKQQKQQLIPSVNQCQTKNPRASSGPAKKLEPDTTTEEACGDNE 120

Query: 199 --SNLDCESQIVGFESQAENLKFEISRRGASESTADNLQRTITPAQEIEEFFASAEHQQR 258
             S  DC     GF+ ++EN      R   S+S +           EIE+FFASAE QQ+
Sbjct: 121 RISRSDCNFGDKGFDLESEN------RSMISDSKSIQ--------SEIEDFFASAEQQQQ 180

Query: 259 RSFIDKYNYDIVNDKPLDGRYEWVELVP 262
           R FI KYN+DIV+D PL GRYEWV+++P
Sbjct: 181 RFFIQKYNFDIVSDNPLPGRYEWVKVMP 189

[Close]

BLAST of CmaCh08G000750 vs. TAIR 10
Match: AT1G49620.1 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 58.9 bits (141), Expect = 6.9e-09
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 158 TSKPKKSARSSSSSVKTTSNLDCESQIVGFESQAENLKFEISRRGASESTADNLQRTITP 217
           T+  +K   SSS ++  T+ +D  +  +  + + E  K               ++++ T 
Sbjct: 107 TNNFRKQGISSSENLGETAEMDSATTEMRDQRKTEKKK--------------KMEKSPTQ 166

Query: 218 AQEIEEFFASAEHQQRRSFIDKYNYDIVNDKPLDGRYEWVELVP 262
           A E+++FF++AE  +++ F +KYNYDIVND PL+GRY+WV L P
Sbjct: 167 A-ELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSLKP 195

[Close]

BLAST of CmaCh08G000750 vs. TAIR 10
Match: AT2G32710.2 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 174 TTSNLDCESQIVGFESQAENLKFEISRRGASESTADNLQRTITPAQEIEEFFASAEHQQR 233
           T  +L    +I+     +  L   +S     E +     R      E++EFF+ AE +Q+
Sbjct: 199 TPCSLIRRPEIMTTPGSSTKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQ 258

Query: 234 RSFIDKYNYDIVNDKPLDGRYEWVEL 260
           + FI+KYN+D VN++PL GR+EW ++
Sbjct: 259 KQFIEKYNFDPVNEQPLPGRFEWTKV 284

The following BLAST results are available for this feature:

BLAST of CmaCh08G000750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKB5	4.8e-23	42.29	Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=KRP3 PE=1...	[more]
Q9LRY0	3.6e-18	39.90	Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KRP5 PE=1...	[more]
Q7XDH8	2.2e-12	34.10	Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q283L0	8.5e-12	30.80	Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q2R185	1.2e-08	62.22	Cyclin-dependent kinase inhibitor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of CmaCh08G000750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48820.1	3.4e-24	42.29	inhibitor/interactor with cyclin-dependent kinase	[more]
AT5G48820.2	1.9e-22	36.89	inhibitor/interactor with cyclin-dependent kinase	[more]
AT3G24810.1	2.5e-19	39.90	Cyclin-dependent kinase inhibitor family protein	[more]
AT1G49620.1	6.9e-09	33.65	Cyclin-dependent kinase inhibitor family protein	[more]
AT2G32710.2	2.6e-08	32.56	Cyclin-dependent kinase inhibitor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003175	Cyclin-dependent kinase inhibitor domain	PFAM	PF02234	CDI	coord: 217..259 e-value: 7.0E-17 score: 61.3
IPR044898	Cyclin-dependent kinase inhibitor domain superfamily	GENE3D	4.10.365.10	p27	coord: 205..261 e-value: 4.3E-8 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..174
None	No IPR available	PANTHER	PTHR46776:SF10	CYCLIN-DEPENDENT KINASE INHIBITOR	coord: 204..260
None	No IPR available	PANTHER	PTHR46776:SF10	CYCLIN-DEPENDENT KINASE INHIBITOR	coord: 79..178
IPR044275	Cyclin-dependent kinase inhibitor, plant	PANTHER	PTHR46776	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	coord: 79..178
IPR044275	Cyclin-dependent kinase inhibitor, plant	PANTHER	PTHR46776	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	coord: 204..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G000750.1	CmaCh08G000750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0051726	regulation of cell cycle
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity