CmaCh08G000610 (gene) Cucurbita maxima (Rimu) v1.1

BLAST of CmaCh08G000610 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-52
Identity = 119/358 (33.24%), Postives = 204/358 (56.98%), Query Frame = 0

Query: 4   EESWSERKPSVEHFRIFGCIGYVHIPDVKRSKLDDKSVKYVLLGFSNESKSFKMFDPVEK 63
           E  W+ ++ S  H ++FGC  + H+P  +R+KLDDKS+  + +G+ +E   ++++DPV+K
Sbjct: 635 ERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKK 694

Query: 64  KVYISRDVIFEEDKKWNWEDVGYSGEENNELVWENDYENVENAVEAEEAEEYTDDVPSPN 123
           KV  SRDV+F E +     D+    E+    +  N       +     AE  TD+V    
Sbjct: 695 KVIRSRDVVFRESEVRTAADM---SEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQG 754

Query: 124 DPPTRETTAITGRVRKPPIWSADYIT-GEGISDKEEEANMARVE---IETLAFMAISD-- 183
           + P        G      +   ++ T GE        +   RVE     +  ++ ISD  
Sbjct: 755 EQPGE--VIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDR 814

Query: 184 -PTNFQEAVGHQKWKQ---AMDVEIQSIERNHTWSLTALPVGAKTIEVKWIYKTKLNKFG 243
            P + +E + H +  Q   AM  E++S+++N T+ L  LP G + ++ KW++K K +   
Sbjct: 815 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDC 874

Query: 244 EVDKYKAQLVVKGYAQEYGVDYTEVVTPVARMDTVRMIIAVVAQKGWGIYQLDVKYAFLH 303
           ++ +YKA+LVVKG+ Q+ G+D+ E+ +PV +M ++R I+++ A     + QLDVK AFLH
Sbjct: 875 KLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLH 934

Query: 304 DELKEDVFVEQPRSYEVAGKKDMVYKLQKALYGLKQALRAWFSRIEVYIVKEGFMRYF 352
            +L+E++++EQP  +EVAGKK MV KL K+LYGLKQA R W+ + + ++  + +++ +
Sbjct: 935 GDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTY 987

BLAST of CmaCh08G000610 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 169.9 bits (429), Expect = 8.1e-41
Identity = 144/573 (25.13%), Postives = 245/573 (42.76%), Query Frame = 0

Query: 5    ESWSERKPSVEHFRIFGCIGYVHIPDVKRSKLDDKSVKYVLLGFSNESKSFKMFDPVEKK 64
            E W  +KP ++H R+FG   YVHI + K+ K DDKS K + +G+  E   FK++D V +K
Sbjct: 638  EMWHNKKPYLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEK 697

Query: 65   VYISRDVIFEEDKKWNWEDVGY-------------------------------------- 124
              ++RDV+ +E    N   V +                                      
Sbjct: 698  FIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNI 757

Query: 125  ----SGEENNELVWEND---------------YENVENAVEAEEAEEY---------TDD 184
                  +E+    + ND                +N++   +++E+ +Y          DD
Sbjct: 758  QFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDD 817

Query: 185  -------VPSPNDPPTRETTAITGRVRKPPIWSADYI-----------TGEGISDKEEEA 244
                     +PN+    ET      +        D I           T   IS  EE+ 
Sbjct: 818  HLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDN 877

Query: 245  NMARVEIETLAFMAISD-PTNFQEAV---GHQKWKQAMDVEIQSIERNHTWSLTALPVGA 304
            ++ +V +   A    +D P +F E         W++A++ E+ + + N+TW++T  P   
Sbjct: 878  SLNKVVLN--AHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENK 937

Query: 305  KTIEVKWIYKTKLNKFGEVDKYKAQLVVKGYAQEYGVDYTEVVTPVARMDTVRMIIAVVA 364
              ++ +W++  K N+ G   +YKA+LV +G+ Q+Y +DY E   PVAR+ + R I+++V 
Sbjct: 938  NIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVI 997

Query: 365  QKGWGIYQLDVKYAFLHDELKEDVFVEQPRSYEVAGKKDMVYKLQKALYGLKQALRAWFS 424
            Q    ++Q+DVK AFL+  LKE++++  P+   ++   D V KL KA+YGLKQA R WF 
Sbjct: 998  QYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFE 1057

Query: 425  RIE----------------VYIVKEG---------------------------FMRY--- 428
              E                +YI+ +G                           F RY   
Sbjct: 1058 VFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLME 1117

BLAST of CmaCh08G000610 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.4e-40
Identity = 107/362 (29.56%), Postives = 165/362 (45.58%), Query Frame = 0

Query: 174  AISDPTNFQEAVGHQKWKQAMDVEIQSIERNHTWSLTALPVGAKTI-EVKWIYKTKLNKF 233
            A S+P    +A+   +W+QAM  EI +   NHTW L   P  + TI   +WI+  K N  
Sbjct: 935  ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 994

Query: 234  GEVDKYKAQLVVKGYAQEYGVDYTEVVTPVARMDTVRMIIAVVAQKGWGIYQLDVKYAFL 293
            G +++YKA+LV KGY Q  G+DY E  +PV +  ++R+++ V   + W I QLDV  AFL
Sbjct: 995  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1054

Query: 294  HDELKEDVFVEQPRSYEVAGKKDMVYKLQKALYGLKQALRAWFSRIEVYIVKEGF----- 353
               L ++V++ QP  +    + D V +L+KA+YGLKQA RAW+  +  Y++  GF     
Sbjct: 1055 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1114

Query: 354  ---------------------------------------------------MRYFLGIEV 413
                                                               + YFLGIE 
Sbjct: 1115 DTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEA 1174

Query: 414  MQKADGFFICQRKYAAELIERFGMQNYNSICNPIVPGQQIGRDEVGVKVNSTLYKQMVGS 473
             +   G  + QR+Y  +L+ R  M     +  P+    ++         + T Y+ +VGS
Sbjct: 1175 KRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGS 1234

BLAST of CmaCh08G000610 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 6.8e-40
Identity = 103/333 (30.93%), Postives = 153/333 (45.95%), Query Frame = 0

Query: 170  LAFMAISDPTNFQEAVGHQKWKQAMDVEIQSIERNHTWSLTALPVGAKTI-EVKWIYKTK 229
            ++  A S+P    +A+  ++W+ AM  EI +   NHTW L   P    TI   +WI+  K
Sbjct: 948  VSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1007

Query: 230  LNKFGEVDKYKAQLVVKGYAQEYGVDYTEVVTPVARMDTVRMIIAVVAQKGWGIYQLDVK 289
             N  G +++YKA+LV KGY Q  G+DY E  +PV +  ++R+++ V   + W I QLDV 
Sbjct: 1008 YNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1067

Query: 290  YAFLHDELKEDVFVEQPRSYEVAGKKDMVYKLQKALYGLKQALRAWFSRIEVYIVKEGF- 349
             AFL   L +DV++ QP  +    + + V KL+KALYGLKQA RAW+  +  Y++  GF 
Sbjct: 1068 NAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFV 1127

Query: 350  -------------------------------------------------------MRYFL 409
                                                                   + YFL
Sbjct: 1128 NSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1187

Query: 410  GIEVMQKADGFFICQRKYAAELIERFGMQNYNSICNPIVPGQQIGRDEVGVKVNSTLYKQ 446
            GIE  +   G  + QR+Y  +L+ R  M     +  P+ P  ++         + T Y+ 
Sbjct: 1188 GIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRG 1247

BLAST of CmaCh08G000610 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.8e-14
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 177 DPTNFQEAVGHQKWKQAMDVEIQSIERNHTWSLTALPVGAKTIEVKWIYKTKLNKFGEVD 236
           +P +   A+    W QAM  E+ ++ RN TW L   PV    +  KW++KTKL+  G +D
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 237 KYKAQLVVKGYAQEYGVDYTEVVTPVARMDTVRMIIAVVAQ 278
           + KA+LV KG+ QE G+ + E  +PV R  T+R I+ V  Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

BLAST of CmaCh08G000610 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 174.9 bits (442), Expect = 1.8e-43
Identity = 125/464 (26.94%), Postives = 210/464 (45.26%), Query Frame = 0

Query: 94  LVWENDYENVENAVEAEEAEEYTDDVPSPNDPPTRETTAITGRVRKPPIWSADY----IT 153
           +V + D     ++++   +    +DVP P+   +   T       + P +  DY    + 
Sbjct: 1   MVSDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRT-------RKPAYLQDYYCHSVA 60

Query: 154 GEGISDKEEEANMARVEIETLAFMA----ISDPTNFQEAVGHQKWKQAMDVEIQSIERNH 213
              I D  +  +  +V     +F+       +P+ + EA     W  AMD EI ++E  H
Sbjct: 61  SLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTH 120

Query: 214 TWSLTALPVGAKTIEVKWIYKTKLNKFGEVDKYKAQLVVKGYAQEYGVDYTEVVTPVARM 273
           TW +  LP   K I  KW+YK K N  G +++YKA+LV KGY Q+ G+D+ E  +PV ++
Sbjct: 121 TWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKL 180

Query: 274 DTVRMIIAVVAQKGWGIYQLDVKYAFLHDELKEDVFVEQPRSYEVAGKKDM----VYKLQ 333
            +V++I+A+ A   + ++QLD+  AFL+ +L E+++++ P  Y       +    V  L+
Sbjct: 181 TSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK 240

Query: 334 KALYGLKQALRAWFSRIEVYIVKEGF---------------------------------- 393
           K++YGLKQA R WF +  V ++  GF                                  
Sbjct: 241 KSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNN 300

Query: 394 ----------------------MRYFLGIEVMQKADGFFICQRKYAAELIERFGMQNYNS 453
                                 ++YFLG+E+ + A G  ICQRKYA +L++  G+     
Sbjct: 301 DAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKP 360

Query: 454 ICNPIVPGQQIGRDEVGVKVNSTLYKQMVGSLMYLTATRPDLMFVTWDLKNAKSLFDEMP 481
              P+ P         G  V++  Y++++G LMYL  TR D+ F      N  S F E P
Sbjct: 361 SSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAV----NKLSQFSEAP 420

BLAST of CmaCh08G000610 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 81.3 bits (199), Expect = 2.7e-15
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 177 DPTNFQEAVGHQKWKQAMDVEIQSIERNHTWSLTALPVGAKTIEVKWIYKTKLNKFGEVD 236
           +P +   A+    W QAM  E+ ++ RN TW L   PV    +  KW++KTKL+  G +D
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 237 KYKAQLVVKGYAQEYGVDYTEVVTPVARMDTVRMIIAVVAQ 278
           + KA+LV KG+ QE G+ + E  +PV R  T+R I+ V  Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

BLAST of CmaCh08G000610 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-07
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0

Query: 434 LKNAKSLFDEMPQRSEVSWNVMISGYSQKGHFMEAVNM----------IEEANFESCSKL 493
           +  AK+LFD+MP+R  VSW  MI+GYSQ GH  EA+ +          +  ++F S    
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418

Query: 494 C-DFGCIEKGLQ 495
           C D   +E G Q
Sbjct: 419 CADVVALELGKQ 430

BLAST of CmaCh08G000610 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-07
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 0

Query: 433 DLKNAKSLFDEMPQRSEVSWNVMISGYSQKGHFMEAVNMIEE 475
           D K A+ LFD+M QRS VSWN MISGYS  G F +AV +  E
Sbjct: 223 DCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264

BLAST of CmaCh08G000610 vs. TAIR 10
Match: AT5G19020.1 (mitochondrial editing factor 18 )

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-07
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 434 LKNAKSLFDEMPQRSEVSWNVMISGYSQKGHFMEA---VNMIEEANFESCSKLCDFGCIE 492
           LK+A+ LFDEMP+R+ V+WNVM++GYS+ G   +A    + I E +  S   + D GC+ 
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID-GCLR 283