CmaCh07G010630 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G010630
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	josephin-like protein
Location	Cma_Chr07: 5694161 .. 5694517 (-)
RNA-Seq Expression	CmaCh07G010630
Synteny	CmaCh07G010630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAAATAAGGTCAAGCAGAGGAGTGAGTTTCAGCTCAGATCAAGCCACCGCCAAGCCAACAAGTCTCCAAAGAAATAGGAAAAGGGTGATCACAGTGTTATGGGTTTTCCGGCTGCCAAAATCCGGCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCGTAGGCGCCAAAGTGGCCAAAGTTCTACGCTATGTGTCATTGAAAAAGAGGTCAGAGTGTTCAAAAAAGGCCTCCGCCGCTACTAACTTCAACAGATCCCATTCGGTGTCGGACTCCATGGAAGAATCTCACAGAGCTGAAGCTGTCAAAGATTGCATCCACTTCTTCAATTCCTCTTCTTCTTCAGCTGCTTGA

mRNA sequence

ATGTCAAAAATAAGGTCAAGCAGAGGAGTGAGTTTCAGCTCAGATCAAGCCACCGCCAAGCCAACAAGTCTCCAAAGAAATAGGAAAAGGGTGATCACAGTGTTATGGGTTTTCCGGCTGCCAAAATCCGGCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCGTAGGCGCCAAAGTGGCCAAAGTTCTACGCTATGTGTCATTGAAAAAGAGGTCAGAGTGTTCAAAAAAGGCCTCCGCCGCTACTAACTTCAACAGATCCCATTCGGTGTCGGACTCCATGGAAGAATCTCACAGAGCTGAAGCTGTCAAAGATTGCATCCACTTCTTCAATTCCTCTTCTTCTTCAGCTGCTTGA

Coding sequence (CDS)

ATGTCAAAAATAAGGTCAAGCAGAGGAGTGAGTTTCAGCTCAGATCAAGCCACCGCCAAGCCAACAAGTCTCCAAAGAAATAGGAAAAGGGTGATCACAGTGTTATGGGTTTTCCGGCTGCCAAAATCCGGCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCGTAGGCGCCAAAGTGGCCAAAGTTCTACGCTATGTGTCATTGAAAAAGAGGTCAGAGTGTTCAAAAAAGGCCTCCGCCGCTACTAACTTCAACAGATCCCATTCGGTGTCGGACTCCATGGAAGAATCTCACAGAGCTGAAGCTGTCAAAGATTGCATCCACTTCTTCAATTCCTCTTCTTCTTCAGCTGCTTGA

Protein sequence

MSKIRSSRGVSFSSDQATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSSAA

Homology

[Close]

BLAST of CmaCh07G010630 vs. ExPASy TrEMBL
Match: A0A6J1GFL9 (josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.3e-34
Identity = 87/125 (69.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 2   SKIRSSRGVSFSSDQ------ATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRV 61
           +K+ SSR VSFSSDQ      + AKP +  RNRKR+ITV WVFRLPKSGR  P SFLRR+
Sbjct: 3   TKLSSSRRVSFSSDQGAAAATSAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLRRI 62

Query: 62  GAKVAKVLRYVSLKKRS---ECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNS 118
           GAKV KVLRYVSL+KRS     S    + +NFNRSHSVS+SMEESHRAEAVKDCI+FFNS
Sbjct: 63  GAKVVKVLRYVSLRKRSASPASSSSLKSGSNFNRSHSVSESMEESHRAEAVKDCINFFNS 122

[Close]

BLAST of CmaCh07G010630 vs. ExPASy TrEMBL
Match: A0A6J1IJN3 (uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 87/125 (69.60%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 2   SKIRSSRGVSFSSDQ----ATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGA 61
           +K+ SSR VSFSSDQ    A AKP +  RNRKR+ITV WVF+LPKSGR  P SFLRR+GA
Sbjct: 3   TKLSSSRRVSFSSDQGAAAAAAKPAAFPRNRKRLITVFWVFQLPKSGRLFPGSFLRRIGA 62

Query: 62  KVAKVLRYVSLKKRS----ECSKKAS--AATNFNRSHSVSDSMEESHRAEAVKDCIHFFN 117
           KV KVLRYVSL+KRS     CS  +S  + +NFNRSHSVS+SMEESHRAEAVKDCI+FFN
Sbjct: 63  KVVKVLRYVSLRKRSASPASCSSSSSLKSGSNFNRSHSVSESMEESHRAEAVKDCINFFN 122

[Close]

BLAST of CmaCh07G010630 vs. ExPASy TrEMBL
Match: A0A0A0L2K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 85/123 (69.11%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 2   SKIRSSRGVSFSSDQATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAK 61
           +K+ S R VSFSSDQA A   +  R RKR I V WVFRLPKS RFSPE FLRR+GAK+AK
Sbjct: 3   TKLSSGRRVSFSSDQAAA---AKSRIRKRPIIVFWVFRLPKSARFSPEKFLRRLGAKMAK 62

Query: 62  VLRYVSLKKRSECSKKASAATN------FNRSHSVSDSMEESHRAEAVKDCIHFFNSSSS 119
           VLRYVSL+KRS  S  +S+  N      FNRSHSVSDSMEESHRAEAVKDCI FFNSS+S
Sbjct: 63  VLRYVSLRKRSTSSTNSSSLKNNNGSSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNS 122

[Close]

BLAST of CmaCh07G010630 vs. ExPASy TrEMBL
Match: A0A061EQH2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.0e-16
Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 5   RSSRGVSFSSDQATAKPTSLQR----------NRKRVITVLWVFRLPKSGRFSPESFLRR 64
           R+S+ VSFS D    +PT L +          NR+RV+  ++ FRL +S RFSP   LRR
Sbjct: 4   RTSKRVSFSPD-VNERPTILLKHGGSTGRTRGNRRRVVAGIFTFRLVRSSRFSPARLLRR 63

Query: 65  VGAKVAKVLRYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSS 116
           +GAKVA+ LR+VS+++ S   K +S+++N  RS S+++S+ +SHRAEA++DCI F NSSS
Sbjct: 64  LGAKVARALRFVSMRRNSNSHKVSSSSSNLARSRSLAESI-DSHRAEAIEDCIEFLNSSS 122

[Close]

BLAST of CmaCh07G010630 vs. ExPASy TrEMBL
Match: A0A6J1AQZ4 (josephin-like protein OS=Herrania umbratica OX=108875 GN=LOC110420321 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15
Identity = 56/121 (46.28%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 5   RSSRGVSFSSDQATAKPTSLQRN----------RKRVITVLWVFRLPKSGRFSPESFLRR 64
           R+S+ VSFS D    +PT L ++          R+RV+  ++ FRL +S RFSP   LRR
Sbjct: 4   RTSKRVSFSPD-VNERPTILLKHGGSTCRTRGKRRRVVAGIFTFRLVRSSRFSPARLLRR 63

Query: 65  VGAKVAKVLRYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSS 116
           +GAKVA+ LR+VS+ + S   K +S+++N  RS S+++S+ +SHRAEA++DCI F NSSS
Sbjct: 64  LGAKVARALRFVSMGRNSNSHKVSSSSSNLARSRSLAESI-DSHRAEAIEDCIEFLNSSS 122

[Close]

BLAST of CmaCh07G010630 vs. NCBI nr
Match: XP_023518083.1 (uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 1   MSKIRSSRGVSFSSDQATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVA 60
           MSKIRSSRGVS  SD+ TAKPT+LQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVA
Sbjct: 1   MSKIRSSRGVSLRSDEGTAKPTTLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVA 60

Query: 61  KVLRYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSSA 118
           KV+RYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSSA
Sbjct: 61  KVVRYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSSA 117

[Close]

BLAST of CmaCh07G010630 vs. NCBI nr
Match: KAG6595400.1 (hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027410.1 hypothetical protein SDJN02_11422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49
Identity = 110/118 (93.22%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MSKIRSSRGVSFSSDQATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVA 60
           MSKIRSSRGVS  SD+ TAKPT+LQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVA
Sbjct: 1   MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVA 60

Query: 61  KVLRYVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSSAA 119
           KVLR VSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAV+DCIHFFNSSSSS+A
Sbjct: 61  KVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNSSSSSSA 118

[Close]

BLAST of CmaCh07G010630 vs. NCBI nr
Match: KAG6603596.1 (hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-33
Identity = 89/130 (68.46%), Postives = 102/130 (78.46%), Query Frame = 0


Query: 2   SKIRSSRGVSFSSDQ-----ATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVG 61
           +K+ SSR VSFSSDQ     + AKP +  RNRKR+ITV WVFRLPKSGR  P SFLRR+G
Sbjct: 3   TKLSSSRRVSFSSDQGAAAASAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLRRIG 62

Query: 62  AKVAKVLRYVSLKKRS----ECSKKASAA-----TNFNRSHSVSDSMEESHRAEAVKDCI 118
           AKV KVLRYVSL+KRS     CS  +S++     +NFNRSHSVS+SMEESHRAEAVKDCI
Sbjct: 63  AKVVKVLRYVSLRKRSASPASCSSSSSSSSLKSGSNFNRSHSVSESMEESHRAEAVKDCI 122

[Close]

BLAST of CmaCh07G010630 vs. NCBI nr
Match: XP_022950374.1 (josephin-like protein [Cucurbita moschata])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 87/125 (69.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 2   SKIRSSRGVSFSSDQ------ATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRV 61
           +K+ SSR VSFSSDQ      + AKP +  RNRKR+ITV WVFRLPKSGR  P SFLRR+
Sbjct: 3   TKLSSSRRVSFSSDQGAAAATSAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLRRI 62

Query: 62  GAKVAKVLRYVSLKKRS---ECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNS 118
           GAKV KVLRYVSL+KRS     S    + +NFNRSHSVS+SMEESHRAEAVKDCI+FFNS
Sbjct: 63  GAKVVKVLRYVSLRKRSASPASSSSLKSGSNFNRSHSVSESMEESHRAEAVKDCINFFNS 122

[Close]

BLAST of CmaCh07G010630 vs. NCBI nr
Match: XP_022977351.1 (uncharacterized protein LOC111477703 [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 2.9e-33
Identity = 87/125 (69.60%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 2   SKIRSSRGVSFSSDQ----ATAKPTSLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGA 61
           +K+ SSR VSFSSDQ    A AKP +  RNRKR+ITV WVF+LPKSGR  P SFLRR+GA
Sbjct: 3   TKLSSSRRVSFSSDQGAAAAAAKPAAFPRNRKRLITVFWVFQLPKSGRLFPGSFLRRIGA 62

Query: 62  KVAKVLRYVSLKKRS----ECSKKAS--AATNFNRSHSVSDSMEESHRAEAVKDCIHFFN 117
           KV KVLRYVSL+KRS     CS  +S  + +NFNRSHSVS+SMEESHRAEAVKDCI+FFN
Sbjct: 63  KVVKVLRYVSLRKRSASPASCSSSSSLKSGSNFNRSHSVSESMEESHRAEAVKDCINFFN 122

[Close]

BLAST of CmaCh07G010630 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07
Identity = 45/132 (34.09%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 5   RSSRGVSFS-SDQATAKP--------TSLQRNRKRVITV-LWVFRLPKSGRFSPESFLRR 64
           R+ + VSF+ + +AT +P        +S   +R+RV+ V +  F L  S   +    ++R
Sbjct: 4   RACKRVSFNPNPEATDEPIFPKHDGLSSSHHSRRRVVLVGILSFGLRSSP--AARKLIQR 63

Query: 65  VGAKVAKVLRYVSLKKR-------------SECSKKASAATNFNRSHSVSDSMEESHRAE 114
           +GA+ AK LR++S ++              S  S  +S+A    RS SV+++  ESHRAE
Sbjct: 64  IGARFAKTLRFISFRRNTTDRRKTSSFLLPSSSSSSSSSAIYMKRSKSVNET--ESHRAE 123

[Close]

BLAST of CmaCh07G010630 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 5   RSSRGVSFSSDQATAK----PT--SLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAK 64
           R+S+ V FS D         PT  S +  R+RV+  ++ F    S   + +  LR +G +
Sbjct: 4   RASKRVRFSPDPEANDELIFPTHSSSRHGRRRVVVGIFSFSFSDSPA-TTKRLLRSIGDR 63

Query: 65  VAKVLRYVSL-----KKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSS 116
           V K  RY+S      K     S   S++    +S S++ S  ESHRAEA++DCI F NS 
Sbjct: 64  VGKTFRYISFGRMNTKTTPSSSSNVSSSLYLMKSKSLNGS--ESHRAEAIEDCIEFLNSC 122

[Close]

BLAST of CmaCh07G010630 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 44.3 bits (103), Expect = 8.0e-05
Identity = 30/101 (29.70%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 17  ATAKPTSLQ--RNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRYVSLKKRSEC 76
           A+AK T+++    +    T     RLP+    +    ++ +G K AK LR V ++K+   
Sbjct: 20  ASAKQTAIKGPYGKSPGCTTSCGLRLPRKTEVTAAKLIKHLGCKFAKGLRLVVMRKKKRS 79

Query: 77  SKKASAATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSS 116
                ++ +      +     +SHR+EA++DCI F NSSSS
Sbjct: 80  PPSKVSSFSGRSQPPIIPINNDSHRSEAIEDCIQFINSSSS 120

The following BLAST results are available for this feature:

BLAST of CmaCh07G010630 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh07G010630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFL9	8.3e-34	69.60	josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1	[more]
A0A6J1IJN3	1.4e-33	69.60	uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703...	[more]
A0A0A0L2K7	2.3e-31	69.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1	[more]
A0A061EQH2	2.0e-16	47.11	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1	[more]
A0A6J1AQZ4	2.3e-15	46.28	josephin-like protein OS=Herrania umbratica OX=108875 GN=LOC110420321 PE=4 SV=1	[more]

BLAST of CmaCh07G010630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518083.1	1.2e-50	94.87	uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]	[more]
KAG6595400.1	1.0e-49	93.22	hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6603596.1	1.0e-33	68.46	hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950374.1	1.7e-33	69.60	josephin-like protein [Cucurbita moschata]	[more]
XP_022977351.1	2.9e-33	69.60	uncharacterized protein LOC111477703 [Cucurbita maxima]	[more]

BLAST of CmaCh07G010630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09032.1	2.9e-07	34.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01225.1	2.5e-06	35.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G07300.1	8.0e-05	29.70	josephin protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR34355:SF1	JOSEPHIN-LIKE PROTEIN	coord: 1..116
None	No IPR available	PANTHER	PTHR34355	JOSEPHIN-LIKE PROTEIN	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G010630.1	CmaCh07G010630.1	mRNA