CmaCh07G010080 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G010080
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionultraviolet-B receptor UVR8-like
LocationCma_Chr07: 5229385 .. 5230691 (+)
RNA-Seq ExpressionCmaCh07G010080
SyntenyCmaCh07G010080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCGAGTGTGCTGGTTTGAGTTGTTTAGTTGTTGCGTGCAAGGTAGACATAGAATGAGGGAATCATGGGCCAACCCAAGCTACGGGACACGAGTGAATTCAAAATAATGAGAAAAAATTATTGATCACTTATTCGTGTATTCGTGCAAGATAAAATAACTTGGTTGTATTTAGAATTATATGGGGCATTTCCTTCCCCGTGATATTCACTATCTTATCATTGTTTCATTAACTAAATCTAAGCTACTCACCAATTATGAGACCTCTACTCGGAGTAGATTTTATTATTATTTTTTTTATACGTTTCTCACCTAGGTGGCAATAAAGTATCATAAAATTAAATATAAAAAAAATTAATTATCTATAAAAAAAATATAATTATTCCATCCTAATGTAATCACATGAAAATAGTTTTTTTTTAAAGAAAAAAAAAAGAAATCATGTGGTCAAATGTTTAGTTATTACTTAATATTTTTAATCTTAAATAATATTATATTCTTCGTTATCCAAAAAAATATATAATTTAAAAATGAATTATTTCCCCTCTTTGCGTAACCACTTAGCCTATCTATGGATATAAATCAAGCATTCTTATTTATTTATTGCAGAAAAAAAATCACAAATATGATTATTAAAAAAAAAAAATCTTTTAGCTACAATTTGATCATTGTCCTCCACTAATTTTTTTGGTTTAATCCCTCCATTAAAATTAAATCATTCCTATTTAATTCCGAAATTAATTGTTTTATAATCCACTTTTGTCTCTACTAATTCACATTCAATAAATCAATTAATTTTTTTATTGTTTAATAATCTATTTCAATTTATAAATTATGAAATATATAAAATTAAATGTTTAATGTTAATTTGTTTTTTTCGAGGACTAAATAATATATAAGTACACAACGTATTACATAATTCAAAATAAAATAAAATAAAATAGATCAAAATATAACGATTATTAGGACTTGTACACGTGGCTACATCTAGTCCGTCCATTGAGAAGTGGCAATTTCCATGAATTTGAAATAATCTGGTGGGCTACACGTGGCAAGCATTTTGGGAAAGGTTGGAGTTGAGAAGAGTCTTTTGGCTTCCAGAATCTTTCAGCTAAATCTTGTGGCTCTCGTTTATATGTGGGGCTATCTTCCCGGTGGTTTGCCGGATAAATCTGTTTTGCTCTCGGCGGAGCTGGTGCGGTTTCCGGGTTGTAACGACGGTGGAAGGATGCGTGGGGCGGTGGTTGTGGATTCGCCATGGCCATTTCAGGTGTTGAAGCTTTCCATCTTTGAAATGTTATAA

mRNA sequence

ATGTTGTTCGAGTGTGCTGGTTTGAGTTGTTTAGTTGTTGCGTGCAAGCTAAATCTTGTGGCTCTCGTTTATATGTGGGGCTATCTTCCCGGTGGTTTGCCGGATAAATCTGTTTTGCTCTCGGCGGAGCTGGTGCGGTTTCCGGGTTGTAACGACGGTGGAAGGATGCGTGGGGCGGTGGTTGTGGATTCGCCATGGCCATTTCAGGTGTTGAAGCTTTCCATCTTTGAAATGTTATAA

Coding sequence (CDS)

ATGTTGTTCGAGTGTGCTGGTTTGAGTTGTTTAGTTGTTGCGTGCAAGCTAAATCTTGTGGCTCTCGTTTATATGTGGGGCTATCTTCCCGGTGGTTTGCCGGATAAATCTGTTTTGCTCTCGGCGGAGCTGGTGCGGTTTCCGGGTTGTAACGACGGTGGAAGGATGCGTGGGGCGGTGGTTGTGGATTCGCCATGGCCATTTCAGGTGTTGAAGCTTTCCATCTTTGAAATGTTATAA

Protein sequence

MLFECAGLSCLVVACKLNLVALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGGRMRGAVVVDSPWPFQVLKLSIFEML
Homology
[Close]
BLAST of CmaCh07G010080 vs. ExPASy TrEMBL
Match: A0A6J1IKD3 (ultraviolet-B receptor UVR8-like OS=Cucurbita maxima OX=3661 GN=LOC111478220 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.5e-07
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 6  AGLSCLVVACKLNLVALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          AG +C  +A K++  ALV+MWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  AGQNCAKMANKID--ALVFMWGYLPGALPDKSLLLSPEPVRLPGSIDGG 53

[Close]
BLAST of CmaCh07G010080 vs. ExPASy TrEMBL
Match: A0A6J1GDP4 (ultraviolet-B receptor UVR8-like OS=Cucurbita moschata OX=3662 GN=LOC111453227 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.5e-07
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 6  AGLSCLVVACKLNLVALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          AG +C  +A K++  ALV+MWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  AGQNCAKMANKID--ALVFMWGYLPGALPDKSLLLSPEPVRLPGSIDGG 53

[Close]
BLAST of CmaCh07G010080 vs. ExPASy TrEMBL
Match: A0A5D3DJX5 (Ultraviolet-B receptor UVR8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00670 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          ALVYMWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  ALVYMWGYLPGALPDKSLLLSPEPVRLPGSTDGG 40

[Close]
BLAST of CmaCh07G010080 vs. ExPASy TrEMBL
Match: A0A5A7SRK3 (Ultraviolet-B receptor UVR8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00650 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          ALVYMWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 20 ALVYMWGYLPGALPDKSLLLSPEPVRLPGSTDGG 53

[Close]
BLAST of CmaCh07G010080 vs. ExPASy TrEMBL
Match: A0A1S3BIK1 (ultraviolet-B receptor UVR8-like OS=Cucumis melo OX=3656 GN=LOC103490458 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          ALVYMWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 20 ALVYMWGYLPGALPDKSLLLSPEPVRLPGSTDGG 53

[Close]
BLAST of CmaCh07G010080 vs. NCBI nr
Match: XP_022950003.1 (ultraviolet-B receptor UVR8-like [Cucurbita moschata])

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 6  AGLSCLVVACKLNLVALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          AG +C  +A K++  ALV+MWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  AGQNCAKMANKID--ALVFMWGYLPGALPDKSLLLSPEPVRLPGSIDGG 53

[Close]
BLAST of CmaCh07G010080 vs. NCBI nr
Match: XP_022978157.1 (ultraviolet-B receptor UVR8-like [Cucurbita maxima])

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 6  AGLSCLVVACKLNLVALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          AG +C  +A K++  ALV+MWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  AGQNCAKMANKID--ALVFMWGYLPGALPDKSLLLSPEPVRLPGSIDGG 53

[Close]
BLAST of CmaCh07G010080 vs. NCBI nr
Match: KAG6603639.1 (hypothetical protein SDJN03_04248, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 6  AGLSCLVVACKLNLVALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          AG +C  +A K++  ALV+MWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  AGQNCAKMANKID--ALVFMWGYLPGALPDKSLLLSPEPVRLPGSIDGG 53

[Close]
BLAST of CmaCh07G010080 vs. NCBI nr
Match: TYK23559.1 (ultraviolet-B receptor UVR8-like [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          ALVYMWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 7  ALVYMWGYLPGALPDKSLLLSPEPVRLPGSTDGG 40

[Close]
BLAST of CmaCh07G010080 vs. NCBI nr
Match: KAA0032676.1 (ultraviolet-B receptor UVR8-like [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 21 ALVYMWGYLPGGLPDKSVLLSAELVRFPGCNDGG 55
          ALVYMWGYLPG LPDKS+LLS E VR PG  DGG
Sbjct: 20 ALVYMWGYLPGALPDKSLLLSPEPVRLPGSTDGG 53

The following BLAST results are available for this feature:
BLAST of CmaCh07G010080 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G010080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IKD37.5e-0763.27ultraviolet-B receptor UVR8-like OS=Cucurbita maxima OX=3661 GN=LOC111478220 PE=... [more]
A0A6J1GDP47.5e-0763.27ultraviolet-B receptor UVR8-like OS=Cucurbita moschata OX=3662 GN=LOC111453227 P... [more]
A0A5D3DJX51.7e-0679.41Ultraviolet-B receptor UVR8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7SRK31.7e-0679.41Ultraviolet-B receptor UVR8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3BIK11.7e-0679.41ultraviolet-B receptor UVR8-like OS=Cucumis melo OX=3656 GN=LOC103490458 PE=4 SV... [more]
BLAST of CmaCh07G010080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950003.11.6e-0663.27ultraviolet-B receptor UVR8-like [Cucurbita moschata][more]
XP_022978157.11.6e-0663.27ultraviolet-B receptor UVR8-like [Cucurbita maxima][more]
KAG6603639.11.6e-0663.27hypothetical protein SDJN03_04248, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK23559.13.5e-0679.41ultraviolet-B receptor UVR8-like [Cucumis melo var. makuwa][more]
KAA0032676.13.5e-0679.41ultraviolet-B receptor UVR8-like [Cucumis melo var. makuwa][more]
BLAST of CmaCh07G010080 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G010080.1CmaCh07G010080.1mRNA