CmaCh07G009150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G009150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Phenylalanine ammonia-lyase
Location	Cma_Chr07: 4339661 .. 4342059 (+)
RNA-Seq Expression	CmaCh07G009150
Synteny	CmaCh07G009150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCATTCAGAAGATTGAAGATAGCTTGTGCCACACCCGAAATGATCCACTCAACTGGGGTGTGGCTGCCGAGTCTCTCAAGGGGAGCCATCTCGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAGGCCCCTTGTCAAGCTCGGTGGTGAAACTCTCACCATTTCCCAAGTGGCTGCCATTGCCACTCGTGATAACCATGTGATGGTCCAACTGGCCGAGTCTGCTAGAGCGGGCGTTAAAGCTAGCAGTGATTGGGTTATGGAGAGCATGAACAAAGGCACTGATAGCTATGGTGTCACTACTGGCTTTGGTGCTACCTCTCATAGAAGGACCAATCAAGGTGGCGCTCTTCAGAAGGAGCTGATTCGATTCTTGAATGCTGGGATCTTTGGAAGTGGAGCTGAGTCCACCCATACTCTGCCCCACTCCGCTACCAGGGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTATTCGGGCATTCGATTTGAGATTTTGGAAGCCATAACCAAACTCTTGAATTCTAACATCACTCCCTGCTTGCCTCTTCGTGGAACCATCACTGCTTCGGGTGATCTTGTTCCTCTTTCTTATATTGCTGGATTGCTCACCGGCCGACCCAACTCTAAGGCGGTTGGACCAAATGGAGAGAGCCTTAATGCTCAGGAGGCTTTTCGACAAGCTGATATTCCTTCTGGGTTCTTCGAGCTGCAGCCTAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGCCAATCCAGAACCAACAGCAGTGCCATTGACAAGAGCAAGACCTTCTTTAGGCTGCAGCTCGAAGAACCCAGAAGGAATATCAGCTTGTCGAAAAGCCTCCTGAGCATTAAGGCTCTCTCCATTTGGTCCAACCGCCTTAGAGTTGGGTCGGCCGGTGAGCAATCCAGCAATATAAGAAAGAGGAACAAGATCACCCGAAGCAGTGATGGTTCCACGAAGAGGCAAGCAGGGAGTGATGTTAGAATTCAAGAGTTTGGTTATGGCTTCCAAAATCTCAAATCGAATGCCCGAATAGCCTTGAAGAAGAGTGTTGATTCTCACCAACATGGCCGCCCTGGTAGCGGAGTGGGGCAGAGTATGGGTGGACTCAGCTCCACTTCCAAAGATCCCAGCATTCAAGAATCGAATCAGCTCCTTCTGAAGAGCGCCACCTTGATTGGTCCTTCTATGAGAGGTAGCACCAAAGCCAGTAGTGACACCATAGCTATCAGTGCCTTTGTTCATGCTCTCCATAACCCAATCACTGCTAGCTTTAACGCCCGCTCTAGCAGACTCGGCCAGTTCGACCACCACATGGTTATCACGAGTGGCAATGGCAGCCACTTGGGAAATGGTGAGAGTTTCACCACCGAGCTTGACAAGGGGCCTCCGGTACTCCTCCACCATGCGCTTCACCTCGTCGAGATGGCTCCCCTTGAGAGCCTCGGCAGCCACACCCCAGTTGAGTGGATCATTAGTGCTGATGCAGAAGCTCTCCACGGAACCATTTTGGGGGGCAAGTTGTTGGAAGGGAGCGGGGGCCATTTGTAA

mRNA sequence

ATGGCAGCCATTCAGAAGATTGAAGATAGCTTGTGCCACACCCGAAATGATCCACTCAACTGGGGTGTGGCTGCCGAGTCTCTCAAGGGGAGCCATCTCGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAGGCCCCTTGTCAAGCTCGGTGGTGAAACTCTCACCATTTCCCAAGTGGCTGCCATTGCCACTCGTGATAACCATGTGATGGTCCAACTGGCCGAGTCTGCTAGAGCGGGCGTTAAAGCTAGCAGTGATTGGGTTATGGAGAGCATGAACAAAGGCACTGATAGCTATGGTGTCACTACTGGCTTTGGTGCTACCTCTCATAGAAGGACCAATCAAGGTGGCGCTCTTCAGAAGGAGCTGATTCGATTCTTGAATGCTGGGATCTTTGGAAGTGGAGCTGAGTCCACCCATACTCTGCCCCACTCCGCTACCAGGGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTATTCGGGCATTCGATTTGAGATTTTGGAAGCCATAACCAAACTCTTGAATTCTAACATCACTCCCTGCTTGCCTCTTCGTGGAACCATCACTGCTTCGGGTGATCTTGTTCCTCTTTCTTATATTGCTGGATTGCTCACCGGCCGACCCAACTCTAAGGCGGTTGGACCAAATGGAGAGAGCCTTAATGCTCAGGAGGCTTTTCGACAAGCTGATATTCCTTCTGGGTTCTTCGAGCTGCAGCCTAAAGAAGGTCTTGCTCTTCTCGAAGAACCCAGAAGGAATATCAGCTTGTCGAAAAGCCTCCTGAGCATTAAGGCTCTCTCCATTTGGTCCAACCGCCTTAGAGTTGGGTCGGCCGGTGAGCAATCCAGCAATATAAGAAAGAGGAACAAGATCACCCGAAGCAGTGATGGTTCCACGAAGAGGCAAGCAGGGAGTGATGTTAGAATTCAAGAGTTTGGTTATGGCTTCCAAAATCTCAAATCGAATGCCCGAATAGCCTTGAAGAAGAGTGTTGATTCTCACCAACATGGCCGCCCTGGTAGCGGAGTGGGGCAGAGTATGGGTGGACTCAGCTCCACTTCCAAAGATCCCAGCATTCAAGAATCGAATCAGCTCCTTCTGAAGAGCGCCACCTTGATTGGTCCTTCTATGAGAGGTAGCACCAAAGCCAGTAGTGACACCATAGCTATCAGTGCCTTTGTTCATGCTCTCCATAACCCAATCACTGCTAGCTTTAACGCCCGCTCTAGCAGACTCGGCCAGTTCGACCACCACATGGTTATCACGAGTGGCAATGGCAGCCACTTGGGAAATGGTGAGAGTTTCACCACCGAGCTTGACAAGGGGCCTCCGGTACTCCTCCACCATGCGCTTCACCTCGTCGAGATGGCTCCCCTTGAGAGCCTCGGCAGCCACACCCCAGTTGAGTGGATCATTAGTGCTGATGCAGAAGCTCTCCACGGAACCATTTTGGGGGGCAAGTTGTTGGAAGGGAGCGGGGGCCATTTGTAA

Coding sequence (CDS)

ATGGCAGCCATTCAGAAGATTGAAGATAGCTTGTGCCACACCCGAAATGATCCACTCAACTGGGGTGTGGCTGCCGAGTCTCTCAAGGGGAGCCATCTCGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAGGCCCCTTGTCAAGCTCGGTGGTGAAACTCTCACCATTTCCCAAGTGGCTGCCATTGCCACTCGTGATAACCATGTGATGGTCCAACTGGCCGAGTCTGCTAGAGCGGGCGTTAAAGCTAGCAGTGATTGGGTTATGGAGAGCATGAACAAAGGCACTGATAGCTATGGTGTCACTACTGGCTTTGGTGCTACCTCTCATAGAAGGACCAATCAAGGTGGCGCTCTTCAGAAGGAGCTGATTCGATTCTTGAATGCTGGGATCTTTGGAAGTGGAGCTGAGTCCACCCATACTCTGCCCCACTCCGCTACCAGGGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTATTCGGGCATTCGATTTGAGATTTTGGAAGCCATAACCAAACTCTTGAATTCTAACATCACTCCCTGCTTGCCTCTTCGTGGAACCATCACTGCTTCGGGTGATCTTGTTCCTCTTTCTTATATTGCTGGATTGCTCACCGGCCGACCCAACTCTAAGGCGGTTGGACCAAATGGAGAGAGCCTTAATGCTCAGGAGGCTTTTCGACAAGCTGATATTCCTTCTGGGTTCTTCGAGCTGCAGCCTAAAGAAGGTCTTGCTCTTCTCGAAGAACCCAGAAGGAATATCAGCTTGTCGAAAAGCCTCCTGAGCATTAAGGCTCTCTCCATTTGGTCCAACCGCCTTAGAGTTGGGTCGGCCGGTGAGCAATCCAGCAATATAAGAAAGAGGAACAAGATCACCCGAAGCAGTGATGGTTCCACGAAGAGGCAAGCAGGGAGTGATGTTAGAATTCAAGAGTTTGGTTATGGCTTCCAAAATCTCAAATCGAATGCCCGAATAGCCTTGAAGAAGAGTGTTGATTCTCACCAACATGGCCGCCCTGGTAGCGGAGTGGGGCAGAGTATGGGTGGACTCAGCTCCACTTCCAAAGATCCCAGCATTCAAGAATCGAATCAGCTCCTTCTGAAGAGCGCCACCTTGATTGGTCCTTCTATGAGAGGTAGCACCAAAGCCAGTAGTGACACCATAGCTATCAGTGCCTTTGTTCATGCTCTCCATAACCCAATCACTGCTAGCTTTAACGCCCGCTCTAGCAGACTCGGCCAGTTCGACCACCACATGGTTATCACGAGTGGCAATGGCAGCCACTTGGGAAATGGTGAGAGTTTCACCACCGAGCTTGACAAGGGGCCTCCGGTACTCCTCCACCATGCGCTTCACCTCGTCGAGATGGCTCCCCTTGAGAGCCTCGGCAGCCACACCCCAGTTGAGTGGATCATTAGTGCTGATGCAGAAGCTCTCCACGGAACCATTTTGGGGGGCAAGTTGTTGGAAGGGAGCGGGGGCCATTTGTAA

Protein sequence

MAAIQKIEDSLCHTRNDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALLEEPRRNISLSKSLLSIKALSIWSNRLRVGSAGEQSSNIRKRNKITRSSDGSTKRQAGSDVRIQEFGYGFQNLKSNARIALKKSVDSHQHGRPGSGVGQSMGGLSSTSKDPSIQESNQLLLKSATLIGPSMRGSTKASSDTIAISAFVHALHNPITASFNARSSRLGQFDHHMVITSGNGSHLGNGESFTTELDKGPPVLLHHALHLVEMAPLESLGSHTPVEWIISADAEALHGTILGGKLLEGSGGHL

Homology

[Close]

BLAST of CmaCh07G009150 vs. ExPASy Swiss-Prot
Match: O23924 (Phenylalanine ammonia-lyase OS=Digitalis lanata OX=49450 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.9e-114
Identity = 212/244 (86.89%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 9   DSLCHTRNDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDN 68
           +  C  +NDPLNW  AAE LKGSHLDEVKRMVEE+R+ +VKLGGETLTISQVAAIA RDN
Sbjct: 13  NGFCVKQNDPLNWVAAAEELKGSHLDEVKRMVEEFRKTVVKLGGETLTISQVAAIAARDN 72

Query: 69  HVMVQLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFL 128
            V VQLAES+RAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT QGGALQKELIRFL
Sbjct: 73  EVAVQLAESSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFL 132

Query: 129 NAGIFGSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPL 188
           NAGIFG+G ESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILE ITK LN NITPCLPL
Sbjct: 133 NAGIFGNGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILETITKFLNHNITPCLPL 192

Query: 189 RGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSG-FFELQPKEG 248
           RGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNA++AF+ A   SG FFELQPKEG
Sbjct: 193 RGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAEQAFKLAGANSGLFFELQPKEG 252

Query: 249 LALL 252
           LAL+
Sbjct: 253 LALV 256

[Close]

BLAST of CmaCh07G009150 vs. ExPASy Swiss-Prot
Match: P25872 (Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=TPA1 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.4e-111
Identity = 203/244 (83.20%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 11  LCHTRNDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRD--- 70
           LC    DPLNW +AAESL+GSHLDEVK+MV E+R+P+VKLGGE+LT++QVAAIA RD   
Sbjct: 15  LCKKSADPLNWEMAAESLRGSHLDEVKKMVSEFRKPMVKLGGESLTVAQVAAIAVRDKSA 74

Query: 71  NHVMVQLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRF 130
           N V V+L+E ARAGVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRT  GGALQKELIRF
Sbjct: 75  NGVKVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRF 134

Query: 131 LNAGIFGSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLP 190
           LNAG+FG+G E++HTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKL+NSNITPCLP
Sbjct: 135 LNAGVFGNGTETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLP 194

Query: 191 LRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEG 250
           LRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGE+LNA+EAFR A +  GFFELQPKEG
Sbjct: 195 LRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGETLNAEEAFRVAGVNGGFFELQPKEG 254

Query: 251 LALL 252
           LAL+
Sbjct: 255 LALV 258

[Close]

BLAST of CmaCh07G009150 vs. ExPASy Swiss-Prot
Match: O49836 (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.4e-111
Identity = 203/235 (86.38%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 17  DPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLAE 76
           DPLNWG+AAES+KGSHLDEVK+MV E+R+P+V+L G+TLTI+QVAAIA RD+ V V+LAE
Sbjct: 14  DPLNWGMAAESMKGSHLDEVKKMVAEFRKPVVQLAGKTLTIAQVAAIAARDDGVTVELAE 73

Query: 77  SARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGSG 136
           +AR GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT QGGALQKELIRFLNAGIFG+G
Sbjct: 74  AAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNG 133

Query: 137 AESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITASG 196
            E++HTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITK LN+NITPCLPLRGTITASG
Sbjct: 134 TETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNTNITPCLPLRGTITASG 193

Query: 197 DLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALL 252
           DLVPLSYIAGLLTGRPNSKAVGP GE LNA+EAFR A I SGFFELQPKEGLAL+
Sbjct: 194 DLVPLSYIAGLLTGRPNSKAVGPTGEKLNAEEAFRLAGISSGFFELQPKEGLALV 248

[Close]

BLAST of CmaCh07G009150 vs. ExPASy Swiss-Prot
Match: P26600 (Phenylalanine ammonia-lyase OS=Solanum lycopersicum OX=4081 GN=PAL5 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 9.0e-111
Identity = 202/239 (84.52%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 16  NDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNH---VMV 75
           NDPLNW +AAESL+GSHLDEVK+MV+E+R+P+VKLGGETLT++QVA+IA  DN    V V
Sbjct: 26  NDPLNWEMAAESLRGSHLDEVKKMVDEFRKPIVKLGGETLTVAQVASIANVDNKSNGVKV 85

Query: 76  QLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGI 135
           +L+ESARAGVKASSDWVM+SM KGTDSYGVTTGFGATSHRRT  GGALQKELIRFLNAG+
Sbjct: 86  ELSESARAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGV 145

Query: 136 FGSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTI 195
           FG+G ES+HTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKL+NSNITPCLPLRGTI
Sbjct: 146 FGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTI 205

Query: 196 TASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALL 252
           TASGDLVPLSYIAGLLTGRPNSKAVGPNGE LNA+E FR A + SGFFELQPKEGLAL+
Sbjct: 206 TASGDLVPLSYIAGLLTGRPNSKAVGPNGEKLNAEERFRVAGVTSGFFELQPKEGLALV 264

[Close]

BLAST of CmaCh07G009150 vs. ExPASy Swiss-Prot
Match: Q43052 (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis OX=34292 GN=PALG2B PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.5e-110
Identity = 202/236 (85.59%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 16  NDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLA 75
           NDPLNWG+AAESLKGSHLDEVKRM+EEYR P+VKLGGETLTI QV AIA+RD  VMV+L+
Sbjct: 19  NDPLNWGMAAESLKGSHLDEVKRMIEEYRNPVVKLGGETLTIGQVTAIASRDVGVMVELS 78

Query: 76  ESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGS 135
           E ARAGVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRT QGG LQKELIRFLNAGIFG+
Sbjct: 79  EEARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKQGGELQKELIRFLNAGIFGN 138

Query: 136 GAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITAS 195
           G ES+HTLP SATRAAMLVR NTLLQGYSGIRFE+LEAITK++N NITPCLPLRGTITAS
Sbjct: 139 GTESSHTLPRSATRAAMLVRTNTLLQGYSGIRFEMLEAITKMINHNITPCLPLRGTITAS 198

Query: 196 GDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALL 252
           GDLVPLSYIAGLLTGRPNSKAVGPNGE L   EAF QA I  GFFELQPKEGLAL+
Sbjct: 199 GDLVPLSYIAGLLTGRPNSKAVGPNGEPLTPAEAFTQAGIDGGFFELQPKEGLALV 254

[Close]

BLAST of CmaCh07G009150 vs. TAIR 10
Match: AT2G37040.1 (PHE ammonia lyase 1 )

HSP 1 Score: 384.8 bits (987), Expect = 1.1e-106
Identity = 195/235 (82.98%), Postives = 212/235 (90.21%), Query Frame = 0


Query: 17  DPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLAE 76
           DPLNWG AAE +KGSHLDEVKRMV E+R+P+V LGGETLTI QVAAI+T  N V V+L+E
Sbjct: 34  DPLNWGAAAEQMKGSHLDEVKRMVAEFRKPVVNLGGETLTIGQVAAISTIGNSVKVELSE 93

Query: 77  SARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGSG 136
           +ARAGV ASSDWVMESMNKGTDSYGVTTGFGATSHRRT  G ALQKELIRFLNAGIFGS 
Sbjct: 94  TARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGST 153

Query: 137 AESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITASG 196
            E++HTLPHSATRAAMLVRINTLLQG+SGIRFEILEAIT  LN+NITP LPLRGTITASG
Sbjct: 154 KETSHTLPHSATRAAMLVRINTLLQGFSGIRFEILEAITSFLNNNITPSLPLRGTITASG 213

Query: 197 DLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALL 252
           DLVPLSYIAGLLTGRPNSKA GPNGE+L A+EAF+ A I SGFF+LQPKEGLAL+
Sbjct: 214 DLVPLSYIAGLLTGRPNSKATGPNGEALTAEEAFKLAGISSGFFDLQPKEGLALV 268

[Close]

BLAST of CmaCh07G009150 vs. TAIR 10
Match: AT3G53260.1 (phenylalanine ammonia-lyase 2 )

HSP 1 Score: 379.8 bits (974), Expect = 3.4e-105
Identity = 193/238 (81.09%), Postives = 212/238 (89.08%), Query Frame = 0


Query: 14  TRNDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQ 73
           T  DPLNWG+AA+ +KGSHLDEVK+MVEEYRRP+V LGGETLTI QVAAI+T    V V+
Sbjct: 23  TLADPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVE 82

Query: 74  LAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIF 133
           LAE++RAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT  G ALQ ELIRFLNAGIF
Sbjct: 83  LAETSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIF 142

Query: 134 GSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTIT 193
           G+  E+ HTLP SATRAAMLVR+NTLLQGYSGIRFEILEAIT LLN NI+P LPLRGTIT
Sbjct: 143 GNTKETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGTIT 202

Query: 194 ASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALL 252
           ASGDLVPLSYIAGLLTGRPNSKA GP+GESL A+EAF +A I +GFF+LQPKEGLAL+
Sbjct: 203 ASGDLVPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPKEGLALV 260

[Close]

BLAST of CmaCh07G009150 vs. TAIR 10
Match: AT3G10340.1 (phenylalanine ammonia-lyase 4 )

HSP 1 Score: 370.2 bits (949), Expect = 2.7e-102
Identity = 196/263 (74.52%), Postives = 216/263 (82.13%), Query Frame = 0


Query: 11  LCHTRN-------DPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAI 70
           LC+  N       DPLNW   AE+LKGSHLDEVKRMV+EYR+  VKLGGETLTI QVAA+
Sbjct: 3   LCNQNNHITAVSGDPLNWNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAAV 62

Query: 71  ATRDNHVMVQLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKE 130
           A       V+LAE ARAGVKASS+WVMESMN+GTDSYGVTTGFGATSHRRT QGGALQ E
Sbjct: 63  ARGGGGSTVELAEEARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNE 122

Query: 131 LIRFLNAGIFGSGA-ESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNI 190
           LIRFLNAGIFG GA +++HTLP   TRAAMLVR+NTLLQGYSGIRFEILEAITKLLN  I
Sbjct: 123 LIRFLNAGIFGPGAGDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHEI 182

Query: 191 TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFEL 250
           TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGP+GE+L A EAF+ A + S FFEL
Sbjct: 183 TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGETLTASEAFKLAGV-SSFFEL 242

Query: 251 QPKEGLALLEEPRRNISLSKSLL 266
           QPKEGLAL+        L+ ++L
Sbjct: 243 QPKEGLALVNGTAVGSGLASTVL 264

[Close]

BLAST of CmaCh07G009150 vs. TAIR 10
Match: AT5G04230.1 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 330.9 bits (847), Expect = 1.8e-90
Identity = 174/253 (68.77%), Postives = 209/253 (82.61%), Query Frame = 0


Query: 16  NDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLA 75
           +DPLNW VAAE+LKGSHL+EVK+MV++YR+  V+LGGETLTI QVAA+A+      V+L+
Sbjct: 12  SDPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVAS--GGPTVELS 71

Query: 76  ESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGS 135
           E AR GVKASSDWVMESMN+ TD+YG+TTGFG++S RRT+QG ALQKELIR+LNAGIF +
Sbjct: 72  EEARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFAT 131

Query: 136 GAES---THTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTI 195
           G E    ++TLP  ATRAAML+R+NTLLQGYSGIRFEILEAIT LLN  ITP LPLRGTI
Sbjct: 132 GNEDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTI 191

Query: 196 TASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALLE 255
           TASGDLVPLSYIAG L GRPNS++VGP+GE L A EAF+ A + S FFEL+PKEGLAL+ 
Sbjct: 192 TASGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGV-SSFFELRPKEGLALVN 251

Query: 256 EPRRNISLSKSLL 266
                 +L+ ++L
Sbjct: 252 GTAVGSALASTVL 261

[Close]

BLAST of CmaCh07G009150 vs. TAIR 10
Match: AT5G04230.2 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 330.9 bits (847), Expect = 1.8e-90
Identity = 174/253 (68.77%), Postives = 209/253 (82.61%), Query Frame = 0


Query: 16  NDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLA 75
           +DPLNW VAAE+LKGSHL+EVK+MV++YR+  V+LGGETLTI QVAA+A+      V+L+
Sbjct: 12  SDPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVAS--GGPTVELS 71

Query: 76  ESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGS 135
           E AR GVKASSDWVMESMN+ TD+YG+TTGFG++S RRT+QG ALQKELIR+LNAGIF +
Sbjct: 72  EEARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFAT 131

Query: 136 GAES---THTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTI 195
           G E    ++TLP  ATRAAML+R+NTLLQGYSGIRFEILEAIT LLN  ITP LPLRGTI
Sbjct: 132 GNEDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTI 191

Query: 196 TASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALLE 255
           TASGDLVPLSYIAG L GRPNS++VGP+GE L A EAF+ A + S FFEL+PKEGLAL+ 
Sbjct: 192 TASGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGV-SSFFELRPKEGLALVN 251

Query: 256 EPRRNISLSKSLL 266
                 +L+ ++L
Sbjct: 252 GTAVGSALASTVL 261

The following BLAST results are available for this feature:

BLAST of CmaCh07G009150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23924	3.9e-114	86.89	Phenylalanine ammonia-lyase OS=Digitalis lanata OX=49450 PE=2 SV=1	[more]
P25872	1.4e-111	83.20	Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=TPA1 PE=2 SV=1	[more]
O49836	1.4e-111	86.38	Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1	[more]
P26600	9.0e-111	84.52	Phenylalanine ammonia-lyase OS=Solanum lycopersicum OX=4081 GN=PAL5 PE=3 SV=1	[more]
Q43052	1.5e-110	85.59	Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis OX=34292 GN=PALG2B PE=3...	[more]

BLAST of CmaCh07G009150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37040.1	1.1e-106	82.98	PHE ammonia lyase 1	[more]
AT3G53260.1	3.4e-105	81.09	phenylalanine ammonia-lyase 2	[more]
AT3G10340.1	2.7e-102	74.52	phenylalanine ammonia-lyase 4	[more]
AT5G04230.1	1.8e-90	68.77	phenyl alanine ammonia-lyase 3	[more]
AT5G04230.2	1.8e-90	68.77	phenyl alanine ammonia-lyase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001106	Aromatic amino acid lyase	PFAM	PF00221	Lyase_aromatic	coord: 55..251 e-value: 3.3E-56 score: 190.9
IPR001106	Aromatic amino acid lyase	PANTHER	PTHR10362	HISTIDINE AMMONIA-LYASE	coord: 14..253
IPR024083	Fumarase/histidase, N-terminal	GENE3D	1.10.275.10		coord: 9..252 e-value: 1.1E-94 score: 318.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..308
None	No IPR available	PANTHER	PTHR10362:SF57	PHENYLALANINE AMMONIA-LYASE 1-LIKE	coord: 14..253
IPR022313	Phenylalanine/histidine ammonia-lyases, active site	PROSITE	PS00488	PAL_HISTIDASE	coord: 190..206
IPR008948	L-Aspartase-like	SUPERFAMILY	48557	L-aspartase-like	coord: 17..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G009150.1	CmaCh07G009150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009800	cinnamic acid biosynthetic process
biological_process	GO:0006559	L-phenylalanine catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0045548	phenylalanine ammonia-lyase activity
molecular_function	GO:0016841	ammonia-lyase activity
molecular_function	GO:0003824	catalytic activity