CmaCh07G005180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G005180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr07: 2242855 .. 2243691 (+)
RNA-Seq Expression	CmaCh07G005180
Synteny	CmaCh07G005180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAATAAAATAAAATAAATTACTCCACCTTTTTTTTATTTGTATTATACAGTCTACACCGACTTGTCGGCCTTATCCACAATCATCCCCCACTCTGTTAATATATTCCTCTCTTCTTCCCAAATGGGTCTCTGCAAAATCAACTAAGAAAAGCTTCGAAGATCACACAGCCATGGCGGATATTGCTATTCTGGTCGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGGCAAGAAGAGAAGGCGGCAGCAGAGGTTCAAGATTTGGTTTCTGGGGTTTCCATCTCTGCAACTGCGAGTAGGGTGAAGAAGATGATGGAATTGGAATTGGAATTGGCCGAACGAAATGAATTCAAATGGGTTTTTGAACCCAAATCCCAAATCGGGCGAGCCGCATCCACTGGATTCTTCTCCGCCTGAGTTCGTCTTCTTTGTATTATACTGTAAATCTTTCCAATTTGTGCATTGTTTGTAATCTTATCCTTCTTATACTTTGGATTTTCTCTTTTAAGGCTGCTTTCTCACTCTGCCTATGCTGGTTCGGCGACTCCTTCTTGTGGATACCCGAGTTGATGATCCTTTTCATTGCACTAAAACACGAACCATTCCATTTGAAAGTCTACTTTAAAATGACGATTGTAAATTATTTCATGATTCAATCATACTGACTTTTCTAAATTAAATTTTAAACTTTTTAAAGACAGAATATACTCGAACATATCACAGATGCTCAAGTCAATCTTAATCCTAGACATTCAGCAACGTCCTCAAACGCTTTCACATGTTCAGCCTGAGCTGCAAGTAGAAATACGCATATGGGATTGCCATAGCCATC

mRNA sequence

ATACAATAAAATAAAATAAATTACTCCACCTTTTTTTTATTTGTATTATACAGTCTACACCGACTTGTCGGCCTTATCCACAATCATCCCCCACTCTGTTAATATATTCCTCTCTTCTTCCCAAATGGGTCTCTGCAAAATCAACTAAGAAAAGCTTCGAAGATCACACAGCCATGGCGGATATTGCTATTCTGGTCGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGGCAAGAAGAGAAGGCGGCAGCAGAGGTTCAAGATTTGGTTTCTGGGGTTTCCATCTCTGCAACTGCGAGTAGGGTGAAGAAGATGATGGAATTGGAATTGGAATTGGCCGAACGAAATGAATTCAAATGGGTTTTTGAACCCAAATCCCAAATCGGGCGAGCCGCATCCACTGGATTCTTCTCCGCCTGAGCTGCTTTCTCACTCTGCCTATGCTGGTTCGGCGACTCCTTCTTGTGGATACCCGAGTTGATGATCCTTTTCATTGCACTAAAACACGAACCATTCCATTTGAAAGTCTACTTTAAAATGACGATTGTAAATTATTTCATGATTCAATCATACTGACTTTTCTAAATTAAATTTTAAACTTTTTAAAGACAGAATATACTCGAACATATCACAGATGCTCAAGTCAATCTTAATCCTAGACATTCAGCAACGTCCTCAAACGCTTTCACATGTTCAGCCTGAGCTGCAAGTAGAAATACGCATATGGGATTGCCATAGCCATC

Coding sequence (CDS)

ATGGCGGATATTGCTATTCTGGTCGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGGCAAGAAGAGAAGGCGGCAGCAGAGGTTCAAGATTTGGTTTCTGGGGTTTCCATCTCTGCAACTGCGAGTAGGGTGAAGAAGATGATGGAATTGGAATTGGAATTGGCCGAACGAAATGAATTCAAATGGGTTTTTGAACCCAAATCCCAAATCGGGCGAGCCGCATCCACTGGATTCTTCTCCGCCTGA

Protein sequence

MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNEFKWVFEPKSQIGRAASTGFFSA

Homology

[Close]

BLAST of CmaCh07G005180 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of CmaCh07G005180 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.3e-33
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERRMKNPRQE+KAAAEVQDLVSGVSISATASRVKKMMELELELA+ NE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of CmaCh07G005180 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-17
Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQ-EEKAAAEVQDL-VSGVSISATAS--RVKKMMELELE-- 60
          MADIAILVAEEYERR KNPR+ +E    E+Q+L  SGVSISATA+  R+KKMME+  +  
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 -LAERNEFKWVFEPKSQIGRAASTGFFSA 83
            AE +EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

[Close]

BLAST of CmaCh07G005180 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16
Identity = 60/88 (68.18%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQ-EEKAAAEVQDLVSGVSISATASRV--KKMMELELE--- 60
          MADIAILVAEEYERR K+PR+ +E    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 LAERNEFKWVFEPKSQIGRAASTGFFSA 83
           AE +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of CmaCh07G005180 vs. ExPASy TrEMBL
Match: A0A1S4DTC5 (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16
Identity = 60/88 (68.18%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQ-EEKAAAEVQDLVSGVSISATASRV--KKMMELELE--- 60
          MADIAILVAEEYERR K+PR+ +E    E+QDL SGVSISATA+ +  KKMME+      
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 LAERNEFKWVFEPKSQIGRAASTGFFSA 83
           AE +EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of CmaCh07G005180 vs. NCBI nr
Match: XP_023003555.1 (uncharacterized protein LOC111497122 [Cucurbita maxima])

HSP 1 Score: 154.1 bits (388), Expect = 5.3e-34
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of CmaCh07G005180 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata])

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERRMKNPRQE+KAAAEVQDLVSGVSISATASRVKKMMELELELA+ NE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of CmaCh07G005180 vs. NCBI nr
Match: KAG6594853.1 (hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.7 bits (369), Expect = 8.5e-32
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERR KNPRQE+KAAAEVQDLVSGVSISATASRVKKMMELELELA+ NE
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAAEVQDLVSGVSISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of CmaCh07G005180 vs. NCBI nr
Match: KAG7026817.1 (hypothetical protein SDJN02_10824, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERR KNPRQE+KAAAEVQDLVSGV ISATASRVKKMMELELELA+ NE
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAAEVQDLVSGVFISATASRVKKMMELELELAQPNE 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
          FKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 FKWVFEPKSQIGRAASTGFFSA 82

[Close]

BLAST of CmaCh07G005180 vs. NCBI nr
Match: XP_023517526.1 (uncharacterized protein LOC111781261 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.7 bits (343), Expect = 8.8e-29
Identity = 77/88 (87.50%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSIS----ATASRVKKMM--ELELE 60
          MADIAILVAEEYERRMKNPRQE+K AAE+QDLVSGVSIS    ATASRVKKMM  ELELE
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKGAAELQDLVSGVSISATATATASRVKKMMELELELE 60

Query: 61 LAERNEFKWVFEPKSQIGRAASTGFFSA 83
          LA++NEFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 LAQQNEFKWVFEPKSQIGRAASTGFFSA 88

[Close]

BLAST of CmaCh07G005180 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 1.6e-04
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATASRVKKMMELELELAERNE 60
          MADIAILVAEEYERRMK+     +++    D    +    T +  K    +++E  ++N 
Sbjct: 1  MADIAILVAEEYERRMKHTTVGSRSSPVEFDWWKIIPAKMTIAFDK----MKIESLKKN- 60

Query: 61 FKWVFEPKSQIGRAASTGFFSA 83
              FE KS+   A S GFFSA
Sbjct: 61 ----FEAKSEFALAISHGFFSA 73

The following BLAST results are available for this feature:

BLAST of CmaCh07G005180 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh07G005180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KS29	2.6e-34	100.00	uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122...	[more]
A0A6J1HEA8	8.3e-33	96.34	uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A0A0KK75	1.3e-17	69.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1	[more]
A0A5A7T3Y6	1.9e-16	68.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DTC5	1.9e-16	68.18	uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=...	[more]

BLAST of CmaCh07G005180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003555.1	5.3e-34	100.00	uncharacterized protein LOC111497122 [Cucurbita maxima]	[more]
XP_022962826.1	1.7e-32	96.34	uncharacterized protein LOC111463202 [Cucurbita moschata]	[more]
KAG6594853.1	8.5e-32	95.12	hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7026817.1	4.2e-31	93.90	hypothetical protein SDJN02_10824, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023517526.1	8.8e-29	87.50	uncharacterized protein LOC111781261 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh07G005180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65207.1	1.6e-04	40.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36067	EXPRESSED PROTEIN	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G005180.1	CmaCh07G005180.1	mRNA