CmaCh06G016790 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G016790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger protein CONSTANS-LIKE 14-like
Location	Cma_Chr06: 10350471 .. 10354410 (-)
RNA-Seq Expression	CmaCh06G016790
Synteny	CmaCh06G016790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTATGAAATGACGAGAAAGGGCCTGAGAGAAATGGCCGAGGATCTGCAAGCTCATCATCCCCCATATTTTTCGATTGGGATCAGGATATTCTTCCGGTACCGCTCAAAGGACCAATGGAGCTGAAGAAACGAATAAAAAACAAGCTTTAATTCCAGTTCACTTTGTAGCTGCCGGTTGTTTTGGATTAGGGTTTTTCTTCTCTGGGATCTTCACCGGCGACGACGAATGGTCTGTTCTAAGTTCACAACGGGGGAGAGCGTCCCATGTGATTTCTGTAACGAGCAGGTCGCGATTCTGTACTGTAGAGCTGATTCTGCGAAGCTCTGTTTGTTCTGCGACAACCATGTTCACTCCGCTAATTTGCTCTCTCGGAAGCACGTTCGGTCTCAGATCTGTGATAACTGTAGGTGTGAGCCGGTTTCTATTCGGTGTTCGACGGATAATCTCGTGCTCTGTCAGGAGTGCGATTGGGATGCCCATGGGAGTTGTTCCGTCTCCGCAGCTCACGATCGAACTCCGATTGAAGGGTTCTCTGGCTGCCCTTCGGTGCTCGAGCTTGTTTCGTTATTGGGCTTCGATCTTGGTGATAAGAAGCTGGAGGAATCCGAGATGTTGGTGCAAAATTGGGGGTCTTCACAGGATTTGGTTATGCAGATTGATTCTTGGGCTTGTAGGGCGAGTGCGACTGCTTTTAATGACCTCATTGTTCCGAATGAGAACCCCTTTCTCTTCGCGAATCTCAACTGTACGGATGCTGCTTCCACGCTGAAGAAGCGGAGTCCGAGCTGTGGGAAGCACAAGCAAGTGATTTACAAGCAGTTGGTTGAGCTACTTAAGAGGGATTTTCAAGGCGGTGATGATGGTGGTAACACTGCCGATGGTGATGCAGGTGGGAAAGATGATGGATTAGAGAATCTTATTCCTGAAACAACGAATGGGGATTGTTATTGGCAAGGGGATTTGGAAGCTCGTCGAATTGAAAAAGGGGATGATGGGGTTTTTGCTGATGTTACTGCTGCTCCTCAGCCATCACTGCAGCAACAAACTTCTTTTACATCTCTGCTAACGATGCCGCCGCATATGGGCTTGAAAGATAGCGAGCGCATAGTTGATGACACTAGTGGATGGGATAGTAACCCAAATCGTCAAAGCATTCAAGTAATTTTTCAATTTGCTTTTGTCGCTTTTCTCTGTTCTGGCAACTGTATTGTTTTTCAGCTTTTCTAGCATGCGCTTGTTTTGTAGTTTGATAGCTATAGCATAGCATTCTGTACGAAGGATGTTCTTCTTTGAGCTGTCCTTGACATACCCTCTAATTTTTTTCCTCCATTTCTTTGTCTAAAGCCTAAAGGAATGAATAAAGTTTTTTCCCAATTCCTAGGAATTGAGTTCGTACATTCTTAGGACGCTGCTTTGGCAGTCAACTGGTTTAACCTTTCAAAAGTAGTACAGTCTTTTTCTAAGGATATGAATGGCTATTAACCTGAAACCATTCCGGAAACCTTTTTAAAACATTGAGGGAATGCCGAAAGGAAAAACACAAATATGATAATATCTACTAGTGGTGGACTTAGGCTGTTACGAATGGTATCAGAGCCCGACACTGAACTGTGTGCGAGAGATAACGTTGGGCCCCCAAGGAGGGTGGATTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAATGGTGCGAAAATCTCTCCTTAGTAGACTGGTTTTAAAACTTTGAGGGGAAGTCCGGAAGGGAAAGCCTAAAGAGAACAATATCTACTAGTGGTGAACTTGAGTGATTACAAATTAGATAGGCAAACTGTGTTCTTTCTTCTAGAGCCTCTATTTGATTTTTGCTGTAAATTAGATTGTTGCAATCATTCTCTGTTGCCAATGGATTTCCCCTCCCTTTTTTCCTTCACACAAATTTTGGTGTATTATACCTGTTCTTTATCTAGGACTGTACTTGCTTGAAGTTAATTGAAATGATTCCTAGTGATCCTGCTTTCTTTTCGTGTGGAATCCGGTTTCTATACTTGTTCGTCGTAGCTATTGCTTTATGTCTCTGGCTTATCATTTGGTGTAGTTTTTCTCATTATCTCCTGCTTGCCAGGTGCCTTGATATTATCAATGTCAAAACATGTAATGTCTGTCGTTGTTTCTGGTATCAACCTTTCGGTAACTTTCTTATTTTCCTTCTTTTCTATGCGTACTTTTTCCAGATTTGGGACTTTCATTTAGGACAATTACGGGGACACAAAGATTCAAACTCATTTGATGACGCCTACGGCACCGGCAACATGGGATTTACAATTAAAAATTTTTGTGATTTTTTGAAAGAAACATCCCCAACAAGCACGAAGTTGATAGGAGAAACCTATCAGATCAATGGCTCTGGCATGCATGATGACTTGCCATCATTGAATGTAAGTCCTGCTCTGTATTTCACTTTTAGCGTGTTTCGAGCTACTCGTTGGCCTGAAGAAAATGTTGTTTCTTGATTACTGCGTTCATCTAAATGATTGTCTACTTAACCTGGAGGTTTGTTATATCCCATTCTTTCTCGTCTCTTAGAAGACCCACAATTATATTTCAGAGGTTTCATGAACAACGAGATCCATCTACTGTGAAATTAAGTATACTTGTCAAAGCTATACTTGTTGTAAATGCATTTGCTCTGGTGGTAGATGTATGATCATATCCAATGTTTTGAGTTCTTGTATGTGATATCCCACATCGGTTGGAGAGGGGAACGAATCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAACAAACACGTTTTAAAATCGTGAAGCTGACGATGATGTGTAACGTGCTAAACCAAACAAAATTTGCTAGCGGTGGGCTTGGACTGTTACAAATAGTATTAAAACCAGACACCTGGCGGTGTGCCAACGAGTACGCTGGACCCAAGGGGGGTGGAGTGTGAGATCCCACATCGGTTGGAGAGGAGAATGAACCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAACAGATGCGTTTTAGAACCATGAAGCTGGCGGCGATACGTAACGGGCTAAAACGGACAATATCTGCTAGCGGTAGGCTTGGGTTGTTACATTGTTTGTCAGATACCCTCTGCCTACTTAATCGCTACATTTTCATGTGCTTCTTTCTTGTATAGTCCTCTGCTCTTTCCCATTGGGAATCAACTGTTGATGTTATATTTTCTCGAAATTGCAGGGTCATGTCAATAACTCAACGCTAAGCCATCGCGCAGCGACATGTGAGAGCAACAATCTGCCTAATGGTACTGCCTGCAGCAAGCTGAAAGGCAGTTCGAAAAATGCGCAGCCAATCGAACAACAACCTATTATCGTAAGAGATGGTATATTGTCGACATCGACAACCAAGGCTGACTTGGAGCTTCTTGCACAGAATAGAGGCAACGCAATGCAGCGTTACAAGGAGAAACGGAAAACTCGAAGGTGCATACTTCAGTCTCTCTTGTAAACTGTAGTTTTCTTTTGCATTTCTATCCTGGACCCTTGAGTGTAGCTTGGAACAGGTACGATAAATACATTCGTTACGAGTCAAGAAAGGCAAGAGCCGATACGAGAAAGCGAGTCAAGGGCCGGTTTGTGAAGGCTAGCGGAGGCCATGCTTGTTGAAGATCAGCTCAACTCAGCTTCCATGGTTGAAAGTAGGTGCGTGTGTAAATATTTCGCCATTACCTTCCACTTATATTTGTACTAGGTGCAAACGCACGTGATTTCATCAGCTTTTCTTTTTTAGAAATAGTTAAAGAACTAATGTTATGCATTATATGAATAATGTCGGTATCTTGGCGACTTTGATAACAGCCTAGCGCTCGGTATATCTATTATATCGGGACTAAACTTGTAATTTAATTGTAAAAGTAGGTATTTTTTTTATCTTTTG

mRNA sequence

ATGGAAGCCTATGAAATGACGAGAAAGGGCCTGAGAGAAATGGCCGAGGATCTGCAAGCTCATCATCCCCCATATTTTTCGATTGGGATCAGGATATTCTTCCGGGTTTTTCTTCTCTGGGATCTTCACCGGCGACGACGAATGGTCTGTTCTAAGTTCACAACGGGGGAGAGCGTCCCATGTGATTTCTGTAACGAGCAGGTCGCGATTCTGTACTGTAGAGCTGATTCTGCGAAGCTCTGTTTGTTCTGCGACAACCATGTTCACTCCGCTAATTTGCTCTCTCGGAAGCACGTTCGGTCTCAGATCTGTGATAACTGTAGGTGTGAGCCGGTTTCTATTCGGTGTTCGACGGATAATCTCGTGCTCTGTCAGGAGTGCGATTGGGATGCCCATGGGAGTTGTTCCGTCTCCGCAGCTCACGATCGAACTCCGATTGAAGGGTTCTCTGGCTGCCCTTCGGTGCTCGAGCTTGTTTCGTTATTGGGCTTCGATCTTGGTGATAAGAAGCTGGAGGAATCCGAGATGTTGGTGCAAAATTGGGGGTCTTCACAGGATTTGGTTATGCAGATTGATTCTTGGGCTTGTAGGGCGAGTGCGACTGCTTTTAATGACCTCATTGTTCCGAATGAGAACCCCTTTCTCTTCGCGAATCTCAACTGTACGGATGCTGCTTCCACGCTGAAGAAGCGGAGTCCGAGCTGTGGGAAGCACAAGCAAGTGATTTACAAGCAGTTGGTTGAGCTACTTAAGAGGGATTTTCAAGGCGGTGATGATGGTGGTAACACTGCCGATGGTGATGCAGGTGGGAAAGATGATGGATTAGAGAATCTTATTCCTGAAACAACGAATGGGGATTGTTATTGGCAAGGGGATTTGGAAGCTCGTCGAATTGAAAAAGGGGATGATGGGGTTTTTGCTGATGTTACTGCTGCTCCTCAGCCATCACTGCAGCAACAAACTTCTTTTACATCTCTGCTAACGATGCCGCCGCATATGGGCTTGAAAGATAGCGAGCGCATAGTTGATGACACTAGTGGATGGGATAGTAACCCAAATCGTCAAAGCATTCAAATTTGGGACTTTCATTTAGGACAATTACGGGGACACAAAGATTCAAACTCATTTGATGACGCCTACGGCACCGGCAACATGGGATTTACAATTAAAAATTTTTGTGATTTTTTGAAAGAAACATCCCCAACAAGCACGAAGTTGATAGGAGAAACCTATCAGATCAATGGCTCTGGCATGCATGATGACTTGCCATCATTGAATGGTCATGTCAATAACTCAACGCTAAGCCATCGCGCAGCGACATGTGAGAGCAACAATCTGCCTAATGGTACTGCCTGCAGCAAGCTGAAAGGCAGTTCGAAAAATGCGCAGCCAATCGAACAACAACCTATTATCGTAAGAGATGGTATATTGTCGACATCGACAACCAAGGCTGACTTGGAGCTTCTTGCACAGAATAGAGGCAACGCAATGCAGCGTTACAAGGAGAAACGGAAAACTCGAAGGTACGATAAATACATTCGTTACGAGTCAAGAAAGGCAAGAGCCGATACGAGAAAGCGAGTCAAGGGCCGGTTTGTGAAGGCTAGCGGAGGCCATGCTTGTTGAAGATCAGCTCAACTCAGCTTCCATGGTTGAAAGTAGGTGCGTGTGTAAATATTTCGCCATTACCTTCCACTTATATTTGTACTAGGTGCAAACGCACGTGATTTCATCAGCTTTTCTTTTTTAGAAATAGTTAAAGAACTAATGTTATGCATTATATGAATAATGTCGGTATCTTGGCGACTTTGATAACAGCCTAGCGCTCGGTATATCTATTATATCGGGACTAAACTTGTAATTTAATTGTAAAAGTAGGTATTTTTTTTATCTTTTG

Coding sequence (CDS)

ATGGAAGCCTATGAAATGACGAGAAAGGGCCTGAGAGAAATGGCCGAGGATCTGCAAGCTCATCATCCCCCATATTTTTCGATTGGGATCAGGATATTCTTCCGGGTTTTTCTTCTCTGGGATCTTCACCGGCGACGACGAATGGTCTGTTCTAAGTTCACAACGGGGGAGAGCGTCCCATGTGATTTCTGTAACGAGCAGGTCGCGATTCTGTACTGTAGAGCTGATTCTGCGAAGCTCTGTTTGTTCTGCGACAACCATGTTCACTCCGCTAATTTGCTCTCTCGGAAGCACGTTCGGTCTCAGATCTGTGATAACTGTAGGTGTGAGCCGGTTTCTATTCGGTGTTCGACGGATAATCTCGTGCTCTGTCAGGAGTGCGATTGGGATGCCCATGGGAGTTGTTCCGTCTCCGCAGCTCACGATCGAACTCCGATTGAAGGGTTCTCTGGCTGCCCTTCGGTGCTCGAGCTTGTTTCGTTATTGGGCTTCGATCTTGGTGATAAGAAGCTGGAGGAATCCGAGATGTTGGTGCAAAATTGGGGGTCTTCACAGGATTTGGTTATGCAGATTGATTCTTGGGCTTGTAGGGCGAGTGCGACTGCTTTTAATGACCTCATTGTTCCGAATGAGAACCCCTTTCTCTTCGCGAATCTCAACTGTACGGATGCTGCTTCCACGCTGAAGAAGCGGAGTCCGAGCTGTGGGAAGCACAAGCAAGTGATTTACAAGCAGTTGGTTGAGCTACTTAAGAGGGATTTTCAAGGCGGTGATGATGGTGGTAACACTGCCGATGGTGATGCAGGTGGGAAAGATGATGGATTAGAGAATCTTATTCCTGAAACAACGAATGGGGATTGTTATTGGCAAGGGGATTTGGAAGCTCGTCGAATTGAAAAAGGGGATGATGGGGTTTTTGCTGATGTTACTGCTGCTCCTCAGCCATCACTGCAGCAACAAACTTCTTTTACATCTCTGCTAACGATGCCGCCGCATATGGGCTTGAAAGATAGCGAGCGCATAGTTGATGACACTAGTGGATGGGATAGTAACCCAAATCGTCAAAGCATTCAAATTTGGGACTTTCATTTAGGACAATTACGGGGACACAAAGATTCAAACTCATTTGATGACGCCTACGGCACCGGCAACATGGGATTTACAATTAAAAATTTTTGTGATTTTTTGAAAGAAACATCCCCAACAAGCACGAAGTTGATAGGAGAAACCTATCAGATCAATGGCTCTGGCATGCATGATGACTTGCCATCATTGAATGGTCATGTCAATAACTCAACGCTAAGCCATCGCGCAGCGACATGTGAGAGCAACAATCTGCCTAATGGTACTGCCTGCAGCAAGCTGAAAGGCAGTTCGAAAAATGCGCAGCCAATCGAACAACAACCTATTATCGTAAGAGATGGTATATTGTCGACATCGACAACCAAGGCTGACTTGGAGCTTCTTGCACAGAATAGAGGCAACGCAATGCAGCGTTACAAGGAGAAACGGAAAACTCGAAGGTACGATAAATACATTCGTTACGAGTCAAGAAAGGCAAGAGCCGATACGAGAAAGCGAGTCAAGGGCCGGTTTGTGAAGGCTAGCGGAGGCCATGCTTGTTGA

Protein sequence

MEAYEMTRKGLREMAEDLQAHHPPYFSIGIRIFFRVFLLWDLHRRRRMVCSKFTTGESVPCDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVSIRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDLGDKKLEESEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRSPSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGDLEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWDSNPNRQSIQIWDFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGETYQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPIIVRDGILSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKGRFVKASGGHAC

Homology

[Close]

BLAST of CmaCh06G016790 vs. ExPASy Swiss-Prot
Match: Q9C7E8 (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 7.2e-90
Identity = 226/499 (45.29%), Postives = 279/499 (55.91%), Query Frame = 0


Query: 54  TTGESVPCDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVS 113
           ++ E VPCDFC E+ A+L+CRAD+AKLCL CD  VH+ANLLSRKHVRSQICDNC  EPVS
Sbjct: 2   SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVS 61

Query: 114 IRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDLGDKKLEE 173
           +RC TDNL+LCQECDWD HGSCSVS AH R+ +EGFSGCPS LEL +L G DL   + +E
Sbjct: 62  VRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQGRKDE 121

Query: 174 SEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKR-- 233
              +        +  MQ+DSW   +     N+LIVP++              +T KKR  
Sbjct: 122 ENQVPMMAMMMDNFGMQLDSWVLGS-----NELIVPSD--------------TTFKKRGS 181

Query: 234 -SPSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQ 293
              SCG++KQV+ KQL ELLK    GG       DGD G +D   +        G C   
Sbjct: 182 CGSSCGRYKQVLCKQLEELLKSGVVGG-------DGDDGDRDRDCDR------EGACDGD 241

Query: 294 GDLEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSG--- 353
           GD EA       +G+         P + ++  ++           +D E I     G   
Sbjct: 242 GDGEA------GEGLMV-------PEMSERLKWS-----------RDVEEINGGGGGGVN 301

Query: 354 --WD---SNPN-RQSIQIWDFHLGQLRGHKDSNSFDDAY-GTG-NMGFTIKNFCDFLKET 413
             W+   +NP+  QS QIWDF+LGQ RG +D++  + AY G G    FTI NF D + ET
Sbjct: 302 QQWNATTTNPSGGQSSQIWDFNLGQSRGPEDTSRVEAAYVGKGAASSFTINNFVDHMNET 361

Query: 414 SPTSTKLIGETYQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSS 473
             T+ K + E  +       D   S +G V       +    ESNN P      K   SS
Sbjct: 362 CSTNVKGVKEIKK------DDYKRSTSGQV-------QPTKSESNNRPITFGSEKGSNSS 421

Query: 474 KNAQPIEQQPIIVRDGILSTS--TTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYES 533
            +    E    I      +T    TKADLE LAQNRG+AMQRYKEKRKTRRYDK IRYES
Sbjct: 422 SDLHFTEH---IAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYES 428

Query: 534 RKARADTRKRVKGRFVKAS 537
           RKARADTR RV+GRFVKAS
Sbjct: 482 RKARADTRLRVRGRFVKAS 428

[Close]

BLAST of CmaCh06G016790 vs. ExPASy Swiss-Prot
Match: O22800 (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE=1 SV=2)

HSP 1 Score: 316.2 bits (809), Expect = 7.0e-85
Identity = 208/486 (42.80%), Postives = 265/486 (54.53%), Query Frame = 0


Query: 54  TTGESVPCDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVS 113
           TT   V C+FC E+ A+L+CRAD+AKLCL CD HVHSANLLSRKHVRSQICDNC  EPVS
Sbjct: 5   TTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVS 64

Query: 114 IRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDL-GDKKLE 173
           +RC TDNLVLCQECDWD HGSCS SA H+R+ +EGFSGCPSVLEL ++ G DL G KK +
Sbjct: 65  VRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKED 124

Query: 174 ESEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRS 233
           + + L +N+G      M +DSW   + +    +LIVP +       ++C       KK+S
Sbjct: 125 DEDELTKNFG------MGLDSWG--SGSNIVQELIVPYD-------VSC-------KKQS 184

Query: 234 PSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGD 293
            S G+ KQV+++QL ELLKR F  G+                 E ++PE  NG       
Sbjct: 185 FSFGRSKQVVFEQL-ELLKRGFVEGEG----------------EIMVPEGING------- 244

Query: 294 LEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWD--S 353
                             + P P+    TSFTSLL          S+ +  +   W+  +
Sbjct: 245 --------------GGSISQPSPT----TSFTSLLM---------SQSLCGNGMQWNATN 304

Query: 354 NPNRQSIQIWDFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGET 413
           +   Q+ QIWDF+LGQ R   + +  +    T    FT  N      +T  T+     E+
Sbjct: 305 HSTGQNTQIWDFNLGQSRNPDEPSPVE----TKGSTFTFNNVTHLKNDTRTTNMNAFKES 364

Query: 414 YQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPI 473
           YQ   S              +ST +    T +SNN+P      K    S      E   I
Sbjct: 365 YQQEDS-------------VHSTSTKGQETSKSNNIPAAIHSHKSSNDSCGLHCTEHIAI 400

Query: 474 IVRDGILSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKG 533
                    + T ADLE +AQNR NAMQRYKEK+KTRRYDK IRYE+RKARA+TR RVKG
Sbjct: 425 TSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKG 400

Query: 534 RFVKAS 537
           RFVKA+
Sbjct: 485 RFVKAT 400

[Close]

BLAST of CmaCh06G016790 vs. ExPASy Swiss-Prot
Match: O82256 (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana OX=3702 GN=COL13 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.7e-33
Identity = 138/476 (28.99%), Postives = 191/476 (40.13%), Query Frame = 0


Query: 61  CDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVSIRCSTDN 120
           CD+C+  VA++YC+ADSAKLCL CD  VH AN L  KH RS +CD+C   P S+ C T+ 
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72

Query: 121 LVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDLGDKKLEESEMLVQN 180
            VLCQ CDW  H   + S+ H R P EGF+GCPSV EL++++G D  D  L+   +    
Sbjct: 73  SVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAIVGLD--DLTLDSGLL---- 132

Query: 181 WGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRSPSCGKHKQ 240
           W S +                + NDLIV   +     N   TD     K R  +CGK+K 
Sbjct: 133 WESPE--------------IVSLNDLIVSGGSG--THNFRATDVPPLPKNRHATCGKYKD 192

Query: 241 VIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGDLEARRIEK 300
            + +QL     R     + G    +      D G + L P     D +   +LE+     
Sbjct: 193 EMIRQL-----RGLSRSEPGCLKFETPDAEIDAGFQFLAP-----DLFSTCELES----- 252

Query: 301 GDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWDSNPNRQSIQIW 360
                                            GLK           W    + +     
Sbjct: 253 ---------------------------------GLK-----------WFDQQDHE----- 312

Query: 361 DFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGETYQINGSGMHD 420
           DF                             +C  LK  S +  K   E      S M  
Sbjct: 313 DF----------------------------PYCSLLKNLSESDEK--PENVDRESSVM-- 330

Query: 421 DLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPIIVRDGILSTS 480
               ++G +N          CE   +                      P+I       TS
Sbjct: 373 --VPVSGCLNR---------CEEETV--------------------MVPVI-------TS 330

Query: 481 TTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKGRFVKAS 537
           T     E+ +  R +A+ RYKEK+K+RRY+K+IRYESRK RA++R R++GRF KA+
Sbjct: 433 TRSMTHEINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAA 330

[Close]

BLAST of CmaCh06G016790 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.9e-27
Identity = 132/479 (27.56%), Postives = 187/479 (39.04%), Query Frame = 0


Query: 61  CDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVSIRCSTDN 120
           CDFC EQ +++YCR+D+A LCL CD +VHSAN LS++H R+ +C+ C  +P S+RCS + 
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDER 64

Query: 121 LVLCQECDWDAHG--SCSVSAAHDRTPIEGFSGCPSVLELVSLLGF--DLGDKKLEESEM 180
           + LCQ CDW  H   + + ++ H R  I  +SGCPS  EL S+  F  DL     EES  
Sbjct: 65  VSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAEES-A 124

Query: 181 LVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRSPSCG 240
             Q  G     +M ID                  ++     N+   + +S  +    S  
Sbjct: 125 CEQGMG-----LMTIDEDG------------TGEKSGVQKINVEQPETSSAAQGMDHSSV 184

Query: 241 KHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGDLEAR 300
                + K+L  + + DF      GN    +     +  E L     N   Y        
Sbjct: 185 PENSSMAKEL-GVCEDDF-----NGNLISDEVDLALENYEELFGSAFNSSRYLFEHGGIG 244

Query: 301 RIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWDSNPNRQS 360
            + + D+   A   +  QP+L    S  S +T         +E I+     + S P   +
Sbjct: 245 SLFEKDE---AHEGSMQQPALSNNASADSFMTC-------RTEPII----CYSSKPAHSN 304

Query: 361 IQIWDFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGETYQINGS 420
           I                 SF    G  N G       DF                     
Sbjct: 305 I-----------------SFSGITGESNAG-------DF--------------------- 358

Query: 421 GMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPIIVRDGI 480
                                               S +K  S+  QP        +D I
Sbjct: 365 -------------------------------QDCGASSMKQLSREPQPWCHP--TAQDII 358

Query: 481 LSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKGRFVKA 536
            S+  T          R NA+ RYKEK+K R++DK +RY SRK RAD R+RVKGRFVK+
Sbjct: 425 ASSHAT---------TRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKS 358

[Close]

BLAST of CmaCh06G016790 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.3e-26
Identity = 128/486 (26.34%), Postives = 185/486 (38.07%), Query Frame = 0


Query: 61  CDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVSIRCSTDN 120
           CDFC EQ +++YCR+D+A LCL CD  VHSAN LS++H R+ +C+ C  +P ++RC  + 
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEER 64

Query: 121 LVLCQECDWDAH---------GSCSVSAAHDRTPIEGFSGCPSVLELVSLLGF--DLGDK 180
           + LCQ CDW  H          S +    H R  I  +SGCPS  EL S+  F  DL  +
Sbjct: 65  VSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDLAGQ 124

Query: 181 KLEESEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLK 240
            + E E+                                          +N  D   T K
Sbjct: 125 SICEQEL----------------------------------------GMMNIDDDGPTDK 184

Query: 241 KRSPSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYW 300
           K   +C +             K+D   G                     IPET++     
Sbjct: 185 K---TCNED------------KKDVLVGSSS------------------IPETSS----- 244

Query: 301 QGDLEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWD 360
                   + +G      DV       + +   + +L      M L++ E +     G  
Sbjct: 245 --------VPQGKSSSAKDV------GMCEDDFYGNLGMDEVDMALENYEELF----GTA 304

Query: 361 SNPNRQSIQIWDFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGE 420
            NP+            +L GH   +S    + T   G                S +  G 
Sbjct: 305 FNPSE-----------ELFGHGGIDSLFHKHQTAPEG--------------GNSVQPAGS 357

Query: 421 TYQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQP 480
                 S   + +        +S +S    T ES +  +   C        + +P    P
Sbjct: 365 NDSFM-SSKTEPIICFASKPAHSNISFSGVTGES-SAGDFQECGASSSIQLSGEPPWYPP 357

Query: 481 IIVRDGILSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVK 536
            +  +   S S T          R NA+ RYKEK+K R++DK +RY SRKARAD R+RVK
Sbjct: 425 TLQDNNACSHSVT----------RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVK 357

[Close]

BLAST of CmaCh06G016790 vs. TAIR 10
Match: AT1G28050.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 332.8 bits (852), Expect = 5.1e-91
Identity = 226/499 (45.29%), Postives = 279/499 (55.91%), Query Frame = 0


Query: 54  TTGESVPCDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVS 113
           ++ E VPCDFC E+ A+L+CRAD+AKLCL CD  VH+ANLLSRKHVRSQICDNC  EPVS
Sbjct: 2   SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVS 61

Query: 114 IRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDLGDKKLEE 173
           +RC TDNL+LCQECDWD HGSCSVS AH R+ +EGFSGCPS LEL +L G DL   + +E
Sbjct: 62  VRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQGRKDE 121

Query: 174 SEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKR-- 233
              +        +  MQ+DSW   +     N+LIVP++              +T KKR  
Sbjct: 122 ENQVPMMAMMMDNFGMQLDSWVLGS-----NELIVPSD--------------TTFKKRGS 181

Query: 234 -SPSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQ 293
              SCG++KQV+ KQL ELLK    GG       DGD G +D   +        G C   
Sbjct: 182 CGSSCGRYKQVLCKQLEELLKSGVVGG-------DGDDGDRDRDCDR------EGACDGD 241

Query: 294 GDLEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSG--- 353
           GD EA       +G+         P + ++  ++           +D E I     G   
Sbjct: 242 GDGEA------GEGLMV-------PEMSERLKWS-----------RDVEEINGGGGGGVN 301

Query: 354 --WD---SNPN-RQSIQIWDFHLGQLRGHKDSNSFDDAY-GTG-NMGFTIKNFCDFLKET 413
             W+   +NP+  QS QIWDF+LGQ RG +D++  + AY G G    FTI NF D + ET
Sbjct: 302 QQWNATTTNPSGGQSSQIWDFNLGQSRGPEDTSRVEAAYVGKGAASSFTINNFVDHMNET 361

Query: 414 SPTSTKLIGETYQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSS 473
             T+ K + E  +       D   S +G V       +    ESNN P      K   SS
Sbjct: 362 CSTNVKGVKEIKK------DDYKRSTSGQV-------QPTKSESNNRPITFGSEKGSNSS 421

Query: 474 KNAQPIEQQPIIVRDGILSTS--TTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYES 533
            +    E    I      +T    TKADLE LAQNRG+AMQRYKEKRKTRRYDK IRYES
Sbjct: 422 SDLHFTEH---IAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYES 428

Query: 534 RKARADTRKRVKGRFVKAS 537
           RKARADTR RV+GRFVKAS
Sbjct: 482 RKARADTRLRVRGRFVKAS 428

[Close]

BLAST of CmaCh06G016790 vs. TAIR 10
Match: AT2G33500.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 316.2 bits (809), Expect = 5.0e-86
Identity = 208/486 (42.80%), Postives = 265/486 (54.53%), Query Frame = 0


Query: 54  TTGESVPCDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVS 113
           TT   V C+FC E+ A+L+CRAD+AKLCL CD HVHSANLLSRKHVRSQICDNC  EPVS
Sbjct: 5   TTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVS 64

Query: 114 IRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDL-GDKKLE 173
           +RC TDNLVLCQECDWD HGSCS SA H+R+ +EGFSGCPSVLEL ++ G DL G KK +
Sbjct: 65  VRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKED 124

Query: 174 ESEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRS 233
           + + L +N+G      M +DSW   + +    +LIVP +       ++C       KK+S
Sbjct: 125 DEDELTKNFG------MGLDSWG--SGSNIVQELIVPYD-------VSC-------KKQS 184

Query: 234 PSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGD 293
            S G+ KQV+++QL ELLKR F  G+                 E ++PE  NG       
Sbjct: 185 FSFGRSKQVVFEQL-ELLKRGFVEGEG----------------EIMVPEGING------- 244

Query: 294 LEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWD--S 353
                             + P P+    TSFTSLL          S+ +  +   W+  +
Sbjct: 245 --------------GGSISQPSPT----TSFTSLLM---------SQSLCGNGMQWNATN 304

Query: 354 NPNRQSIQIWDFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGET 413
           +   Q+ QIWDF+LGQ R   + +  +    T    FT  N      +T  T+     E+
Sbjct: 305 HSTGQNTQIWDFNLGQSRNPDEPSPVE----TKGSTFTFNNVTHLKNDTRTTNMNAFKES 364

Query: 414 YQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPI 473
           YQ   S              +ST +    T +SNN+P      K    S      E   I
Sbjct: 365 YQQEDS-------------VHSTSTKGQETSKSNNIPAAIHSHKSSNDSCGLHCTEHIAI 400

Query: 474 IVRDGILSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKG 533
                    + T ADLE +AQNR NAMQRYKEK+KTRRYDK IRYE+RKARA+TR RVKG
Sbjct: 425 TSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKG 400

Query: 534 RFVKAS 537
           RFVKA+
Sbjct: 485 RFVKAT 400

[Close]

BLAST of CmaCh06G016790 vs. TAIR 10
Match: AT2G33500.2 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 316.2 bits (809), Expect = 5.0e-86
Identity = 208/486 (42.80%), Postives = 266/486 (54.73%), Query Frame = 0


Query: 54  TTGESVPCDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVS 113
           TT   V C+FC E+ A+L+CRAD+AKLCL CD HVHSANLLSRKHVRSQICDNC  EPVS
Sbjct: 5   TTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVS 64

Query: 114 IRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDL-GDKKLE 173
           +RC TDNLVLCQECDWD HGSCS SA H+R+ +EGFSGCPSVLEL ++ G DL G KK +
Sbjct: 65  VRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKED 124

Query: 174 ESEMLVQNWGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRS 233
           + + L +N+G      M +DSW   + +    +LIVP +       ++C       KK+S
Sbjct: 125 DEDELTKNFG------MGLDSWG--SGSNIVQELIVPYD-------VSC-------KKQS 184

Query: 234 PSCGKHKQVIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGD 293
            S G+ KQV+++QL ELLKR F  G+                 E ++PE  NG       
Sbjct: 185 FSFGRSKQVVFEQL-ELLKRGFVEGEG----------------EIMVPEGING------- 244

Query: 294 LEARRIEKGDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWD--S 353
                             + P P+    TSFTSLL          S+ +  +   W+  +
Sbjct: 245 --------------GGSISQPSPT----TSFTSLLM---------SQSLCGNGMQWNATN 304

Query: 354 NPNRQSIQIWDFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGET 413
           +   Q+ QIWDF+LGQ R   + +  +    T    FT  N      +T  T+     E+
Sbjct: 305 HSTGQNTQIWDFNLGQSRNPDEPSPVE----TKGSTFTFNNVTHLKNDTRTTNMNAFKES 364

Query: 414 YQINGSGMHDDLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPI 473
           YQ       D +        +ST +    T +SNN+P      K    S      E   I
Sbjct: 365 YQ------EDSV--------HSTSTKGQETSKSNNIPAAIHSHKSSNDSCGLHCTEHIAI 399

Query: 474 IVRDGILSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKG 533
                    + T ADLE +AQNR NAMQRYKEK+KTRRYDK IRYE+RKARA+TR RVKG
Sbjct: 425 TSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKG 399

Query: 534 RFVKAS 537
           RFVKA+
Sbjct: 485 RFVKAT 399

[Close]

BLAST of CmaCh06G016790 vs. TAIR 10
Match: AT2G47890.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-34
Identity = 138/476 (28.99%), Postives = 191/476 (40.13%), Query Frame = 0


Query: 61  CDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVSIRCSTDN 120
           CD+C+  VA++YC+ADSAKLCL CD  VH AN L  KH RS +CD+C   P S+ C T+ 
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72

Query: 121 LVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDLGDKKLEESEMLVQN 180
            VLCQ CDW  H   + S+ H R P EGF+GCPSV EL++++G D  D  L+   +    
Sbjct: 73  SVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAIVGLD--DLTLDSGLL---- 132

Query: 181 WGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRSPSCGKHKQ 240
           W S +                + NDLIV   +     N   TD     K R  +CGK+K 
Sbjct: 133 WESPE--------------IVSLNDLIVSGGSG--THNFRATDVPPLPKNRHATCGKYKD 192

Query: 241 VIYKQLVELLKRDFQGGDDGGNTADGDAGGKDDGLENLIPETTNGDCYWQGDLEARRIEK 300
            + +QL     R     + G    +      D G + L P     D +   +LE+     
Sbjct: 193 EMIRQL-----RGLSRSEPGCLKFETPDAEIDAGFQFLAP-----DLFSTCELES----- 252

Query: 301 GDDGVFADVTAAPQPSLQQQTSFTSLLTMPPHMGLKDSERIVDDTSGWDSNPNRQSIQIW 360
                                            GLK           W    + +     
Sbjct: 253 ---------------------------------GLK-----------WFDQQDHE----- 312

Query: 361 DFHLGQLRGHKDSNSFDDAYGTGNMGFTIKNFCDFLKETSPTSTKLIGETYQINGSGMHD 420
           DF                             +C  LK  S +  K   E      S M  
Sbjct: 313 DF----------------------------PYCSLLKNLSESDEK--PENVDRESSVM-- 330

Query: 421 DLPSLNGHVNNSTLSHRAATCESNNLPNGTACSKLKGSSKNAQPIEQQPIIVRDGILSTS 480
               ++G +N          CE   +                      P+I       TS
Sbjct: 373 --VPVSGCLNR---------CEEETV--------------------MVPVI-------TS 330

Query: 481 TTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKGRFVKAS 537
           T     E+ +  R +A+ RYKEK+K+RRY+K+IRYESRK RA++R R++GRF KA+
Sbjct: 433 TRSMTHEINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAA 330

[Close]

BLAST of CmaCh06G016790 vs. TAIR 10
Match: AT2G47890.2 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-33
Identity = 77/186 (41.40%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 61  CDFCNEQVAILYCRADSAKLCLFCDNHVHSANLLSRKHVRSQICDNCRCEPVSIRCSTDN 120
           CD+C+  VA++YC+ADSAKLCL CD  VH AN L  KH RS +CD+C   P S+ C T+ 
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72

Query: 121 LVLCQECDWDAHGSCSVSAAHDRTPIEGFSGCPSVLELVSLLGFDLGDKKLEESEMLVQN 180
            VLCQ CDW  H   + S+ H R P EGF+GCPSV EL++++G D  D  L+   +    
Sbjct: 73  SVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAIVGLD--DLTLDSGLL---- 132

Query: 181 WGSSQDLVMQIDSWACRASATAFNDLIVPNENPFLFANLNCTDAASTLKKRSPSCGKHKQ 240
           W S +                + NDLIV   +     N   TD     K R  +CGK+K 
Sbjct: 133 WESPE--------------IVSLNDLIVSGGSG--THNFRATDVPPLPKNRHATCGKYKD 174

Query: 241 VIYKQL 247
            + +QL
Sbjct: 193 EMIRQL 174

The following BLAST results are available for this feature:

BLAST of CmaCh06G016790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E8	7.2e-90	45.29	Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE...	[more]
O22800	7.0e-85	42.80	Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE...	[more]
O82256	3.7e-33	28.99	Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana OX=3702 GN=COL13 PE...	[more]
Q9LUA9	3.9e-27	27.56	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]
Q9SSE5	4.3e-26	26.34	Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1...	[more]

BLAST of CmaCh06G016790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28050.1	5.1e-91	45.29	B-box type zinc finger protein with CCT domain	[more]
AT2G33500.1	5.0e-86	42.80	B-box type zinc finger protein with CCT domain	[more]
AT2G33500.2	5.0e-86	42.80	B-box type zinc finger protein with CCT domain	[more]
AT2G47890.1	2.6e-34	28.99	B-box type zinc finger protein with CCT domain	[more]
AT2G47890.2	2.9e-33	41.40	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..274
None	No IPR available	PANTHER	PTHR31717:SF45	ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED	coord: 56..536
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 56..536
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 60..103 e-value: 1.1449E-15 score: 68.8635
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 56..103 e-value: 2.8E-13 score: 60.1 coord: 104..146 e-value: 3.7 score: 1.5
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 56..103 score: 9.413656
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 99..146 score: 10.409365
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 493..535 e-value: 1.7E-15 score: 56.9
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 493..535 score: 15.030873

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G016790.1	CmaCh06G016790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding