CmaCh06G016650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G016650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	rho GDP-dissociation inhibitor 1-like
Location	Cma_Chr06: 10290992 .. 10292713 (+)
RNA-Seq Expression	CmaCh06G016650
Synteny	CmaCh06G016650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGCATGTATTTTGTGTATGAAAAAAGGGTTGGCTGCTGGTAATATACTCAAAACAAATGATTATATTGTTTCCCTAAACAGTTTCTCTTATCTTCCACAACTTTTATGATATAAAAGGGAGAGGGAAACATCTATTTTTAGCAAGCCTAGCTTCCAAAAGCATCTATACTTCTGGTGGCCTAAAACTTTCTCTCTTCTTCTTTCTTCATATATTTTACAATGTCAGCTGTGGTTGGTTCTCTCTCAACCAAGAACGTTAAGTTCAACCCTCAAGTAGGGGAGGAAGAGTTAGGTAAGTCTATGAACGATCGAGAAGGAGAAGAGATTATTGAAGAAGACGAAGATGACAAACTTAAGCCCGAGGGAGAAGTCGATCTCGGTCCTCGGTTCTCTATCAAGGAACAACTCGAGAAAGATAAGGTAAGTTCGTAAGAGTGAATTTGATATGACTTTTTAACAATACTTTTGTTGATGCATCATAGCTTTGGTTTTGTTTGTCTAGGATGATGTAAGCTTGAGAAAATGGAAGGAACAGTTGTTGGGTAGTGTTGATCTCTCTGCCATTGGAGGTGAACATGAATTTTTTCTTTGTGTTGATGCTATTTAATTTTAAGAACAACCATATCTATTCAAACGGATCTCTGAAGCGGATTCCTTGAATTCTTATAGATATAACCAACATATCTGAACGATATCATTATTGAAATCACTGACCATATATCTAATATTGATCATAATTTATAAGAACATTTTATAGTCGAAGTAAGATTGAGACGGGTTAAAGGTTTACTCGACGTCACATATCCCGAGAAAGCCTACCCGCTGTTGACTTAAGATATGATCAAAGGATGAATGATGTGTTTTGGTGAAGCAGAAAGCAAAGAAGCAGAAGTGAAAATCCAGAGCCTAACAATCCAATGTCCAGGGCGAGCAGATCTTGTGCTGCCATTGCCATTTACCAAAACTTCCAAGAGCAACAGCCTCTTCGCCATCAAGGAAGGCTCCCGATACCGACTCCGATTCAGTTTTATCGTCGTTGGGAACATCGTTTCCGGTCTCAAGTACACGAACACTGTCTGGAAGACTGGTGTGAGAGGTTTGTTTCCATATAAGTTGAAAAAGTTGGGAACTTTTTACATCTGTTTTTGTTTGATGGGTTGAATTTTGTTTTGACAGTGGATCACACCAAGAAAATGCTGGGAACGTTCAGTCCTCAAAAGGAGCCATATGTGTATGAAATGGAAGAAGAAGTCACACCGTCTGGAATGTTTGCGAGAGGCTCTTATTCTGCAAGAACAAAGGTAAAAAACCAGACAAAACATTCATAGATTTTAAAACACAGCAGTAAATCGGCGTAGTTTTCTGAGGACAAAATTGATCAAACTGTTCTTGATTGTTCTTGTTTTGTCCCAGTTTGTGGATGATGATGGGAAGTGCTTCTTGGATGTGAGCTACCACTTTGAAATCCAAAAGAATTGGGCAACACCCTCTTGAGATATTGTTGCAAAGGGAGAAGCTCTGGGTTTGGATAATGCTTCAATTGAAAGGCTCAACTTGTTGTGTTACTTTTTGCTGCAATCCAATAGGGATTTGTGTATCACTTTTGTTCATTCAATATATATTTTAGCCGACGAACTTACCTTTCGGTATCGGTGCATACCACCTAATTGGTTACTTCAATCAATATCTCAACGTTAATGGTTAATAGCTAAGTAAAG

mRNA sequence

CAAAAGCATGTATTTTGTGTATGAAAAAAGGGTTGGCTGCTGGTAATATACTCAAAACAAATGATTATATTGTTTCCCTAAACAGTTTCTCTTATCTTCCACAACTTTTATGATATAAAAGGGAGAGGGAAACATCTATTTTTAGCAAGCCTAGCTTCCAAAAGCATCTATACTTCTGGTGGCCTAAAACTTTCTCTCTTCTTCTTTCTTCATATATTTTACAATGTCAGCTGTGGTTGGTTCTCTCTCAACCAAGAACGTTAAGTTCAACCCTCAAGTAGGGGAGGAAGAGTTAGGTAAGTCTATGAACGATCGAGAAGGAGAAGAGATTATTGAAGAAGACGAAGATGACAAACTTAAGCCCGAGGGAGAAGTCGATCTCGGTCCTCGGTTCTCTATCAAGGAACAACTCGAGAAAGATAAGGATGATGTAAGCTTGAGAAAATGGAAGGAACAGTTGTTGGGTAGTGTTGATCTCTCTGCCATTGGAGAAAGCAAAGAAGCAGAAGTGAAAATCCAGAGCCTAACAATCCAATGTCCAGGGCGAGCAGATCTTGTGCTGCCATTGCCATTTACCAAAACTTCCAAGAGCAACAGCCTCTTCGCCATCAAGGAAGGCTCCCGATACCGACTCCGATTCAGTTTTATCGTCGTTGGGAACATCGTTTCCGGTCTCAAGTACACGAACACTGTCTGGAAGACTGGTGTGAGAGTGGATCACACCAAGAAAATGCTGGGAACGTTCAGTCCTCAAAAGGAGCCATATGTGTATGAAATGGAAGAAGAAGTCACACCGTCTGGAATGTTTGCGAGAGGCTCTTATTCTGCAAGAACAAAGTTTGTGGATGATGATGGGAAGTGCTTCTTGGATGTGAGCTACCACTTTGAAATCCAAAAGAATTGGGCAACACCCTCTTGAGATATTGTTGCAAAGGGAGAAGCTCTGGGTTTGGATAATGCTTCAATTGAAAGGCTCAACTTGTTGTGTTACTTTTTGCTGCAATCCAATAGGGATTTGTGTATCACTTTTGTTCATTCAATATATATTTTAGCCGACGAACTTACCTTTCGGTATCGGTGCATACCACCTAATTGGTTACTTCAATCAATATCTCAACGTTAATGGTTAATAGCTAAGTAAAG

Coding sequence (CDS)

ATGTCAGCTGTGGTTGGTTCTCTCTCAACCAAGAACGTTAAGTTCAACCCTCAAGTAGGGGAGGAAGAGTTAGGTAAGTCTATGAACGATCGAGAAGGAGAAGAGATTATTGAAGAAGACGAAGATGACAAACTTAAGCCCGAGGGAGAAGTCGATCTCGGTCCTCGGTTCTCTATCAAGGAACAACTCGAGAAAGATAAGGATGATGTAAGCTTGAGAAAATGGAAGGAACAGTTGTTGGGTAGTGTTGATCTCTCTGCCATTGGAGAAAGCAAAGAAGCAGAAGTGAAAATCCAGAGCCTAACAATCCAATGTCCAGGGCGAGCAGATCTTGTGCTGCCATTGCCATTTACCAAAACTTCCAAGAGCAACAGCCTCTTCGCCATCAAGGAAGGCTCCCGATACCGACTCCGATTCAGTTTTATCGTCGTTGGGAACATCGTTTCCGGTCTCAAGTACACGAACACTGTCTGGAAGACTGGTGTGAGAGTGGATCACACCAAGAAAATGCTGGGAACGTTCAGTCCTCAAAAGGAGCCATATGTGTATGAAATGGAAGAAGAAGTCACACCGTCTGGAATGTTTGCGAGAGGCTCTTATTCTGCAAGAACAAAGTTTGTGGATGATGATGGGAAGTGCTTCTTGGATGTGAGCTACCACTTTGAAATCCAAAAGAATTGGGCAACACCCTCTTGA

Protein sequence

MSAVVGSLSTKNVKFNPQVGEEELGKSMNDREGEEIIEEDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCPGRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWATPS

Homology

[Close]

BLAST of CmaCh06G016650 vs. ExPASy Swiss-Prot
Match: Q9SFC6 (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.6e-62
Identity = 120/190 (63.16%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 38  EEDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESKEAEVK 97
           EE+EDD    + ++ LGP+++IKE LEKDKDD SLRKWKEQLLGSVD++ IGE+ + EV+
Sbjct: 53  EEEEDD----DSKLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVR 112

Query: 98  IQSLTIQCPGRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTV 157
           I SL I  PGR D+VL +P     K    F +KEGS+Y L+F+F V  NIVSGL+YTNTV
Sbjct: 113 IDSLAIISPGRPDIVLLVPENGNPK-GMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTV 172

Query: 158 WKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDV 217
           WKTGV+VD  K+MLGTFSPQ EPY + M EE TPSGMFARGSYSARTKF+DDD KC+L++
Sbjct: 173 WKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEI 232

Query: 218 SYHFEIQKNW 228
           +Y F+I+K W
Sbjct: 233 NYSFDIRKEW 237

[Close]

BLAST of CmaCh06G016650 vs. ExPASy Swiss-Prot
Match: P52565 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-26
Identity = 78/198 (39.39%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 35  EIIEEDEDDKLKPEGEVDLGP--RFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESK 94
           +I  E+E+D    E  V+  P  + SI+E  E DKDD SLRK+KE LLG V +SA  +  
Sbjct: 13  QIAAENEED----EHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPN 72

Query: 95  EAEVKIQSLTIQC---PGRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVS 154
              V +  LT+ C   PG  +L L        K +  F +KEG  YR++ SF V   IVS
Sbjct: 73  VPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQS--FVLKEGVEYRIKISFRVNREIVS 132

Query: 155 GLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKFVDD 214
           G+KY    ++ GV++D T  M+G++ P+ E Y +    E  P GM ARGSYS +++F DD
Sbjct: 133 GMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDD 192

Query: 215 DGKCFLDVSYHFEIQKNW 228
           D    L   ++  I+K+W
Sbjct: 193 DKTDHLSWEWNLTIKKDW 202

[Close]

BLAST of CmaCh06G016650 vs. ExPASy Swiss-Prot
Match: Q4R4J0 (Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-26
Identity = 78/198 (39.39%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 35  EIIEEDEDDKLKPEGEVDLGP--RFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESK 94
           +I  E+E+D    E  V+  P  + SI+E  E DKDD SLRK+KE LLG V +SA  +  
Sbjct: 13  QIAAENEED----EHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPN 72

Query: 95  EAEVKIQSLTIQC---PGRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVS 154
              V +  LT+ C   PG  +L L        K +  F +KEG  YR++ SF V   IVS
Sbjct: 73  VPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQS--FVLKEGVEYRIKISFRVNREIVS 132

Query: 155 GLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKFVDD 214
           G+KY    ++ GV++D T  M+G++ P+ E Y +    E  P GM ARGSYS +++F DD
Sbjct: 133 GMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDD 192

Query: 215 DGKCFLDVSYHFEIQKNW 228
           D    L   ++  I+K+W
Sbjct: 193 DKTDHLSWEWNLTIKKDW 202

[Close]

BLAST of CmaCh06G016650 vs. ExPASy Swiss-Prot
Match: P52566 (Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3)

HSP 1 Score: 119.4 bits (298), Expect = 5.4e-26
Identity = 72/201 (35.82%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 28  MNDREGEEIIEEDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSA 87
           M ++  E  +EED+DD+L  +      P+ S+KE  E DKDD SL K+K+ LLG  D   
Sbjct: 1   MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLG--DGPV 60

Query: 88  IGESKEAEVKIQSLTIQCPGR-ADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGN 147
           + + K   V +  LT+ C      + + L     +       +KEGS YR++  F V  +
Sbjct: 61  VTDPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRD 120

Query: 148 IVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKF 207
           IVSGLKY    ++TGV+VD    M+G++ P+ E Y +    E  P GM ARG+Y  ++ F
Sbjct: 121 IVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFF 180

Query: 208 VDDDGKCFLDVSYHFEIQKNW 228
            DDD +  L   ++  I+K W
Sbjct: 181 TDDDKQDHLSWEWNLSIKKEW 199

[Close]

BLAST of CmaCh06G016650 vs. ExPASy Swiss-Prot
Match: P19803 (Rho GDP-dissociation inhibitor 1 OS=Bos taurus OX=9913 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 77/198 (38.89%), Postives = 110/198 (55.56%), Query Frame = 0


Query: 35  EIIEEDEDDKLKPEGEVDLGP--RFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESK 94
           +I  E+E+D    E  V+  P  + SI+E  E DKDD SLRK+KE LLG V +SA  +  
Sbjct: 13  QIAAENEED----EHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPN 72

Query: 95  EAEVKIQSLTIQC---PGRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVS 154
              V +  LT+ C   PG  +L L        K +  F +KEG  YR++ SF V   IVS
Sbjct: 73  VPNVVVTRLTLVCSTAPGPLELDLTGDLESFKKQS--FVLKEGVEYRIKISFRVNREIVS 132

Query: 155 GLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKFVDD 214
           G+KY    ++ GV++D T  M+G++ P+ E Y +    E  P GM ARGSY+ +++F DD
Sbjct: 133 GMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDD 192

Query: 215 DGKCFLDVSYHFEIQKNW 228
           D    L   ++  I+K W
Sbjct: 193 DRTDHLSWEWNLTIKKEW 202

[Close]

BLAST of CmaCh06G016650 vs. TAIR 10
Match: AT3G07880.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 239.6 bits (610), Expect = 2.5e-63
Identity = 120/190 (63.16%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 38  EEDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDVSLRKWKEQLLGSVDLSAIGESKEAEVK 97
           EE+EDD    + ++ LGP+++IKE LEKDKDD SLRKWKEQLLGSVD++ IGE+ + EV+
Sbjct: 53  EEEEDD----DSKLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVR 112

Query: 98  IQSLTIQCPGRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTV 157
           I SL I  PGR D+VL +P     K    F +KEGS+Y L+F+F V  NIVSGL+YTNTV
Sbjct: 113 IDSLAIISPGRPDIVLLVPENGNPK-GMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTV 172

Query: 158 WKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDV 217
           WKTGV+VD  K+MLGTFSPQ EPY + M EE TPSGMFARGSYSARTKF+DDD KC+L++
Sbjct: 173 WKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEI 232

Query: 218 SYHFEIQKNW 228
           +Y F+I+K W
Sbjct: 233 NYSFDIRKEW 237

[Close]

BLAST of CmaCh06G016650 vs. TAIR 10
Match: AT1G62450.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-59
Identity = 119/204 (58.33%), Postives = 149/204 (73.04%), Query Frame = 0


Query: 25  GKSMNDREGEEIIEEDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDVSLRKWKEQLLGSVD 84
           G S++  E +   EEDED KL      +LGP  ++KEQLE+DKDD SLR+WKEQLLG VD
Sbjct: 28  GSSLSPTEDD---EEDEDKKL------ELGPMIALKEQLERDKDDESLRRWKEQLLGVVD 87

Query: 85  LSAIGESKEAEVKIQSLTIQCPGRADLVLPLPFT-KTSKSNSLFAIKEGSRYRLRFSFIV 144
           L  +GE+ +  VKI  LTI+ P R ++VL +P     +     F IKEGS+Y L F+F V
Sbjct: 88  LEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKGPWFTIKEGSKYTLVFNFRV 147

Query: 145 VGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGSYSAR 204
             NIVSGL+Y NTVWKTGV+VD TK MLGTFSPQ E Y + M EE+TPSGMFARGSYSAR
Sbjct: 148 TNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGMFARGSYSAR 207

Query: 205 TKFVDDDGKCFLDVSYHFEIQKNW 228
           TKF+DDD KC+L+++Y F+I+K+W
Sbjct: 208 TKFIDDDNKCYLEINYTFDIRKSW 222

[Close]

BLAST of CmaCh06G016650 vs. TAIR 10
Match: AT1G12070.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 2.7e-57
Identity = 109/208 (52.40%), Postives = 150/208 (72.12%), Query Frame = 0


Query: 21  EEELGKSMNDREGEEIIEEDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDVSLRKWKEQLL 80
           EE  G+ ++ +     +   +DD+ + + +++LGP  ++KEQLEKDKDD SLR+WKEQLL
Sbjct: 15  EEPKGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKDDESLRRWKEQLL 74

Query: 81  GSVDLSAIGESKEAEVKIQSLTIQCPGRADLVLPLPFT-KTSKSNSLFAIKEGSRYRLRF 140
           GSVDL  +GE+ +  VKI +LTI+ P R D+VL +P   K +     F +KEGS+Y L F
Sbjct: 75  GSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWFTLKEGSKYTLIF 134

Query: 141 SFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKEPYVYEMEEEVTPSGMFARGS 200
           +F V  NIVSGL+Y+NTVWKTG++V   K+MLGTFSPQ EPY + M EE  PSG+  RGS
Sbjct: 135 TFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLLVRGS 194

Query: 201 YSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           YS ++KFVDDD +C+L+ +Y F+I+KNW
Sbjct: 195 YSVKSKFVDDDNQCYLENNYTFDIRKNW 222

The following BLAST results are available for this feature:

BLAST of CmaCh06G016650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFC6	3.6e-62	63.16	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV...	[more]
P52565	4.1e-26	39.39	Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3	[more]
Q4R4J0	4.1e-26	39.39	Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 ...	[more]
P52566	5.4e-26	35.82	Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3	[more]
P19803	1.6e-25	38.89	Rho GDP-dissociation inhibitor 1 OS=Bos taurus OX=9913 GN=ARHGDIA PE=1 SV=3	[more]

BLAST of CmaCh06G016650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07880.1	2.5e-63	63.16	Immunoglobulin E-set superfamily protein	[more]
AT1G62450.1	1.0e-59	58.33	Immunoglobulin E-set superfamily protein	[more]
AT1G12070.1	2.7e-57	52.40	Immunoglobulin E-set superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000406	Rho protein GDP-dissociation inhibitor	PRINTS	PR00492	RHOGDI	coord: 206..223 score: 33.33 coord: 147..163 score: 50.98 coord: 164..179 score: 36.46
IPR000406	Rho protein GDP-dissociation inhibitor	PFAM	PF02115	Rho_GDI	coord: 38..226 e-value: 4.2E-78 score: 261.6
IPR000406	Rho protein GDP-dissociation inhibitor	PANTHER	PTHR10980	RHO GDP-DISSOCIATION INHIBITOR	coord: 14..229
IPR024792	Rho GDP-dissociation inhibitor domain superfamily	GENE3D	2.70.50.30	Coagulation Factor XIII, subunit A, domain 1	coord: 50..229 e-value: 1.3E-65 score: 222.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR10980:SF36	OS01G0913600 PROTEIN	coord: 14..229
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 39..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G016650.1	CmaCh06G016650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0007266	Rho protein signal transduction
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005094	Rho GDP-dissociation inhibitor activity