CmaCh06G016100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G016100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ANK_REP_REGION domain-containing protein
Location	Cma_Chr06: 10026607 .. 10030469 (-)
RNA-Seq Expression	CmaCh06G016100
Synteny	CmaCh06G016100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAGCCTCAAGATCAACGGTCAAGGCCTTCCAAACCCACTACTATTCATAGCTATGCTCAATCTGGGAACATTCTTAGCCTTCAAAAGCTGCTCCAAGAAAACCCTGGTCTTCTTAATGATAGAAATCCTGTTGTATGTTCTCTTTCTTGTACAACTTTTTGGCATTTTTATGAGTTTTTGTTATCATTTTCATTTCTAACTTTGTATATTTGTTCATCGGGAAGTGACTTTCTTATGTGAATATGAATTGATTTGTTGATATGTGTGAGATAAAGGACTTATTCATTGTTCCTGACTTTGTATGCTTGAAACTGGCTCCGTATGATTATTTTGGTGCTTTAATTTCATTGTTGGGCAAGAATTTCTGGAGTATATAACTTTTATTTGACCATTATTTCCAATATCTTCCATCCAGGATTTTTTCAGGTGTGTTTGGAGCTTATTTTGCTCTATTTTATTTTTCACATCTGAAGATTTTATTATTAGATATATCCCATGTTAACCATCCATTTATCTCCTTTCTTCCTTTCAAATATGAATGCTAATGATACTTGCTGGCTTAAGACTAGAATTTCAGTTTTCATTTTGAATACTCTATCTCCATTTCATACTTTTCTCAGTAATTCAATGAAGAAAATGGTGCTATGTATTTTTTAAAATTAACTCCAATGCTGTTTTTTTTTTGCTCACGTGAGATCCCACGTCAGTTGAAGAGGGGAACGAAACATTTTTTATAAGGGTGTAGAAACTTTTCCCTAGTAGACGCGTTTTAAAACCTTAAGTGGAACCTCGGAAGGGAAAGCCCAAATAGGACAATATCTGTTAGCGGTGGGCTTGGGCCGTTACCAATGGTATCAGAGTCAAACACCAAACCGTGTGCCATCAAGGAGGTTGAGCCCCGAAGGGGGGTAGAACATCAAACGGTGTGCCAGCAAGGACACTAGGCCTCGAAGAGGGGTGGATTGGAGGGTCCCACATCGATTAGAGAGGGAACAAGTGCCAGCGAGGATGCTGGACCCAAATGGGAGGTGGATTGTAAGATCCCACATCGGTTGGAAAGGGTGACAAAACATTTTTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCATTTTAAAATCTTGAGGGAAAGTCCGGAAGGGAAAGCGCAAAGAAAACAATATCTGCTAGCGGTGGCCTTGGGCCTGTTACAACAATGATTCAAAATATAGAACCAATTTATCTTATTATTTATATTACCTTCGGAGTGAAGCTTATGGATTTCAATGCCTACTTCAGATGGGACAGACACCCCTCCATGTGTCTGCAGGCTATAACAGGGCAGAGATCGTAAAATTTCTTCTTGTCTGGCAAGGTCCAGAAAAGGTCGAGTTGGAAGCCAAAAACATGGTAGGTGTAGATATTCTTTATCGTGGTAGTGTTTTTCGTGAAATTGAACTGTAGTGCTCAATTATTGGGTAGAGCTAATATTCTCTTCTCTCTGCAGTATGGAGAGACCCCATTGCATATGGCAGCAAAGCATGGGTGCAATGATGCAGCACGGGCGCTACTTGCTCACGGCGCTTTTGTTGAAGCCAAAGCAAATGTGCTATATATTGCCTTTTAGTTATCTCTTCTTCATTGATTCTGCAATGAAATACATGACTCATGGGATTTGTTGGTTGAAATGTCTGCTTTTGTGTATTCCTTTATGCAGAATGGGATGACACCATTGCACCTTGCCGTCTGGTATTCACTCCAATCCGAAGACTGGGCCACTGTCAAGACACTGCTTGAATATAACGCCGATTGTAGTGCGAAAGATGACGTAATCCTTCAATATTTTGCTTGTAATATTTTCTGTTCTCCATTATACTACATAGAAAATGGTACTAAATAGGCTTGTCTCTTAAATGCAGGAGGGTATGACTCCCCTAAGCCATCTGTCACAGGGCTCGTGCAGTAAACAGTTGAGGGAATTGTTGAACCAGCATTTAGAAGAGCAGAAAAGGCGAAAAGCAATTGAAGCATGCAGTGAAACTAAAGCAAAGATGATGGAACTCGACGATGAGCTCTCGAAAATCGTGGGTTTGCACGAGCTTAAGATCCAACTCCAGAAATGGGCTAAGGGAATTCTTTTAGATGAGAGACGCAGGGCCCTTGGCCTCAAAGTTGGCATCAGGAAGTCACCTCATATGGCATTTCTTGGCAATCCTGGAACAGGTAATTACATATAGGAGGCAGAGTTTGCTATAGCTATTTTGTTCCTATTTTCTAAAAATGATCCGACGTCCATCAAGAATTCCTATAAATATATCTGTTTACGTATGGATTTTCATTAACATACGTAATACTAGTTACTATGGCCTACTATGACCCTGGTTGATATTGGTTTGAGTTCTTATTTTTGAAGATTAAGCGGGTAAATGCGACTACGACTCATGAGTTTCTTTGTTTGTTATATACTTTTTACGCAAGTTTTCAAAATTCAAGTCAAGTTTTGAAAGCTAGAAAAAGTAGTTTTTGTTTTTGGAATTTAAGAATTTAATTTTAACCCTACCAAACGAAGCTTAACCATATTGTAACAACCCAAGTCCACCGCTAGCAGATATTGTCCGCTTTGACCTGTTACGTATCGCCGTCAACCTCACGGTTTTTAGAACGTGTTTACTAGGGAGAGGTTTTCACACCCTTATAAGAAATGCTTGGATCCCCTCTCCAACCAATGTGGGATCTCACATATATGAGGTGTATTGTGAATATCCGAGTCTATATTTATATGATTTTGGGATTGTGAATATCTGGAACTTTTATATCATAAAGCATGCGTTCTTTTTGGATGCTCAGTCATATATAGTTGCTTAGCTAATTCGTGCTAGCTAACAAAACTTGTATTTACCATCATGGTTCACTTATTGTTGTTATTATTTTTGATAGGTAAGACTATGGTAGCTCGAATACTCGGAAAATTGCTTCATATGGTTGGCATCCTACCGACTGATAAGGTAACAGAAGTACAGAGAACGGATTTGGTTGGCGAATTCGTTGGTCACACCGGTCCGAAAACCAGGAAGAAGGTACACCATGCGTGGCTTTTAGCCTCTCTTTTTTAAGTCATTTGGAACATAGCTTTATGTATGGATGCCACCTCTGACTTTCAGATCAAAGAAGCAGAGGGCGGAATACTTTTCATCGATGAAGCCTACCGACTGATACCAATGCAGAAATCTGATGATAAGGATTACGGTTTGGAAGCTCTGGAAGAGATCATGTCTGTCATGGACAGTGGGAATATCGTAGTCATATTCGCTGGTTACTGCGAACCGATGCAGCGCGTAATATCTTCAAACGAAGGATTTCATCGACGAGTAACCAAATTTTTCTACTTCAATGACTTCAATTCAGAAGAATTAGCAAAGATCCTCCATATCAAGATGGATAATCAAACAGAGGATAGCTTGTTATATGGCTTTAAGTTGCACCCTACGTGCACCGTAGAAGCCATTTCGGAGCTGATCGAGAGAGAAACGCAAGAAAGGCAGCGTAAGGAGATGAACGGTGGTTTGATCGATCCAATGCTCGTAAACGCCAAAGAGAATTTGGATGGCAGGCTGAGTTTTGAGTGTATAGACACAGAAGAACTGTGTAGTATTACAATGAATGATTTAGAAGCAGGCCTTCGTTTGCTAACAAAGTAAGATGAGTTGGTTCATGCACAAACTATCAAATGTTCTTTGGAGCTGTTGGCACCATCTCTGATATCAGTACTGCAGCAAGCTGAAAGGCCATGCTTGTGGAGATTTTAGGTGATTTTCTAAAGAAAAATTAATTTTATGATATCTGTAAAGAACTCTGTGTTATGGAACTCAAAAAATG

mRNA sequence

ATGCAGAAGCCTCAAGATCAACGGTCAAGGCCTTCCAAACCCACTACTATTCATAGCTATGCTCAATCTGGGAACATTCTTAGCCTTCAAAAGCTGCTCCAAGAAAACCCTGGTCTTCTTAATGATAGAAATCCTGTTATGGGACAGACACCCCTCCATGTGTCTGCAGGCTATAACAGGGCAGAGATCGTAAAATTTCTTCTTGTCTGGCAAGGTCCAGAAAAGGTCGAGTTGGAAGCCAAAAACATGTATGGAGAGACCCCATTGCATATGGCAGCAAAGCATGGGTGCAATGATGCAGCACGGGCGCTACTTGCTCACGGCGCTTTTGTTGAAGCCAAAGCAAATAATGGGATGACACCATTGCACCTTGCCGTCTGGTATTCACTCCAATCCGAAGACTGGGCCACTGTCAAGACACTGCTTGAATATAACGCCGATTGTAGTGCGAAAGATGACGAGGGTATGACTCCCCTAAGCCATCTGTCACAGGGCTCGTGCAGTAAACAGTTGAGGGAATTGTTGAACCAGCATTTAGAAGAGCAGAAAAGGCGAAAAGCAATTGAAGCATGCAGTGAAACTAAAGCAAAGATGATGGAACTCGACGATGAGCTCTCGAAAATCGTGGGTTTGCACGAGCTTAAGATCCAACTCCAGAAATGGGCTAAGGGAATTCTTTTAGATGAGAGACGCAGGGCCCTTGGCCTCAAAGTTGGCATCAGGAAGTCACCTCATATGGCATTTCTTGGCAATCCTGGAACAGGTAAGACTATGGTAGCTCGAATACTCGGAAAATTGCTTCATATGGTTGGCATCCTACCGACTGATAAGGTAACAGAAGTACAGAGAACGGATTTGGTTGGCGAATTCGTTGGTCACACCGGTCCGAAAACCAGGAAGAAGATCAAAGAAGCAGAGGGCGGAATACTTTTCATCGATGAAGCCTACCGACTGATACCAATGCAGAAATCTGATGATAAGGATTACGGTTTGGAAGCTCTGGAAGAGATCATGTCTGTCATGGACAGTGGGAATATCGTAGTCATATTCGCTGGTTACTGCGAACCGATGCAGCGCGTAATATCTTCAAACGAAGGATTTCATCGACGAGTAACCAAATTTTTCTACTTCAATGACTTCAATTCAGAAGAATTAGCAAAGATCCTCCATATCAAGATGGATAATCAAACAGAGGATAGCTTGTTATATGGCTTTAAGTTGCACCCTACGTGCACCGTAGAAGCCATTTCGGAGCTGATCGAGAGAGAAACGCAAGAAAGGCAGCGTAAGGAGATGAACGGTGGTTTGATCGATCCAATGCTCGTAAACGCCAAAGAGAATTTGGATGGCAGGCTGAGTTTTGAGTGTATAGACACAGAAGAACTGTGTAGTATTACAATGAATGATTTAGAAGCAGGCCTTCGTTTGCTAACAAAGTAAGATGAGTTGGTTCATGCACAAACTATCAAATGTTCTTTGGAGCTGTTGGCACCATCTCTGATATCAGTACTGCAGCAAGCTGAAAGGCCATGCTTGTGGAGATTTTAGGTGATTTTCTAAAGAAAAATTAATTTTATGATATCTGTAAAGAACTCTGTGTTATGGAACTCAAAAAATG

Coding sequence (CDS)

ATGCAGAAGCCTCAAGATCAACGGTCAAGGCCTTCCAAACCCACTACTATTCATAGCTATGCTCAATCTGGGAACATTCTTAGCCTTCAAAAGCTGCTCCAAGAAAACCCTGGTCTTCTTAATGATAGAAATCCTGTTATGGGACAGACACCCCTCCATGTGTCTGCAGGCTATAACAGGGCAGAGATCGTAAAATTTCTTCTTGTCTGGCAAGGTCCAGAAAAGGTCGAGTTGGAAGCCAAAAACATGTATGGAGAGACCCCATTGCATATGGCAGCAAAGCATGGGTGCAATGATGCAGCACGGGCGCTACTTGCTCACGGCGCTTTTGTTGAAGCCAAAGCAAATAATGGGATGACACCATTGCACCTTGCCGTCTGGTATTCACTCCAATCCGAAGACTGGGCCACTGTCAAGACACTGCTTGAATATAACGCCGATTGTAGTGCGAAAGATGACGAGGGTATGACTCCCCTAAGCCATCTGTCACAGGGCTCGTGCAGTAAACAGTTGAGGGAATTGTTGAACCAGCATTTAGAAGAGCAGAAAAGGCGAAAAGCAATTGAAGCATGCAGTGAAACTAAAGCAAAGATGATGGAACTCGACGATGAGCTCTCGAAAATCGTGGGTTTGCACGAGCTTAAGATCCAACTCCAGAAATGGGCTAAGGGAATTCTTTTAGATGAGAGACGCAGGGCCCTTGGCCTCAAAGTTGGCATCAGGAAGTCACCTCATATGGCATTTCTTGGCAATCCTGGAACAGGTAAGACTATGGTAGCTCGAATACTCGGAAAATTGCTTCATATGGTTGGCATCCTACCGACTGATAAGGTAACAGAAGTACAGAGAACGGATTTGGTTGGCGAATTCGTTGGTCACACCGGTCCGAAAACCAGGAAGAAGATCAAAGAAGCAGAGGGCGGAATACTTTTCATCGATGAAGCCTACCGACTGATACCAATGCAGAAATCTGATGATAAGGATTACGGTTTGGAAGCTCTGGAAGAGATCATGTCTGTCATGGACAGTGGGAATATCGTAGTCATATTCGCTGGTTACTGCGAACCGATGCAGCGCGTAATATCTTCAAACGAAGGATTTCATCGACGAGTAACCAAATTTTTCTACTTCAATGACTTCAATTCAGAAGAATTAGCAAAGATCCTCCATATCAAGATGGATAATCAAACAGAGGATAGCTTGTTATATGGCTTTAAGTTGCACCCTACGTGCACCGTAGAAGCCATTTCGGAGCTGATCGAGAGAGAAACGCAAGAAAGGCAGCGTAAGGAGATGAACGGTGGTTTGATCGATCCAATGCTCGTAAACGCCAAAGAGAATTTGGATGGCAGGCTGAGTTTTGAGTGTATAGACACAGAAGAACTGTGTAGTATTACAATGAATGATTTAGAAGCAGGCCTTCGTTTGCTAACAAAGTAA

Protein sequence

MQKPQDQRSRPSKPTTIHSYAQSGNILSLQKLLQENPGLLNDRNPVMGQTPLHVSAGYNRAEIVKFLLVWQGPEKVELEAKNMYGETPLHMAAKHGCNDAARALLAHGAFVEAKANNGMTPLHLAVWYSLQSEDWATVKTLLEYNADCSAKDDEGMTPLSHLSQGSCSKQLRELLNQHLEEQKRRKAIEACSETKAKMMELDDELSKIVGLHELKIQLQKWAKGILLDERRRALGLKVGIRKSPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKKIKEAEGGILFIDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGNIVVIFAGYCEPMQRVISSNEGFHRRVTKFFYFNDFNSEELAKILHIKMDNQTEDSLLYGFKLHPTCTVEAISELIERETQERQRKEMNGGLIDPMLVNAKENLDGRLSFECIDTEELCSITMNDLEAGLRLLTK

Homology

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BLAST of CmaCh06G016100 vs. ExPASy Swiss-Prot
Match: P95648 (Protein CbbX OS=Rhodobacter sphaeroides OX=1063 GN=cbbX PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.5e-35
Identity = 86/209 (41.15%), Postives = 130/209 (62.20%), Query Frame = 0


Query: 192 SETKAKMMELDDELSKIVGLHELKIQLQKWAKGILLDERRRALGLKVGIRKSP--HMAFL 251
           S  K  + ELD EL   +GL  +K ++++ A  +L++  R+ LGL     ++P  HM+F 
Sbjct: 20  SGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPTLHMSFT 79

Query: 252 GNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKKIKEAEGGI 311
           GNPGTGKT VA  +  LLH +G +    +  V R DLVG+++GHT PKT++ +K A GG+
Sbjct: 80  GNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGV 139

Query: 312 LFIDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSG--NIVVIFAGYCEPMQRVISSNEGF 371
           LFIDEAY L   +  +++DYG EA+E ++ VM++   ++VVI AGY + M+    SN GF
Sbjct: 140 LFIDEAYYL--YRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMENFFQSNPGF 199

Query: 372 HRRVTKFFYFNDFNSEELAKILHIKMDNQ 397
             R+     F D++ EEL +I    +D+Q
Sbjct: 200 RSRIAHHIEFPDYSDEELFEIAGHMLDDQ 220

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BLAST of CmaCh06G016100 vs. ExPASy Swiss-Prot
Match: P51228 (Protein CfxQ homolog OS=Porphyra purpurea OX=2787 GN=cfxQ PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.5e-35
Identity = 83/205 (40.49%), Postives = 132/205 (64.39%), Query Frame = 0


Query: 195 KAKMMELDDELS-KIVGLHELKIQLQKWAKGILLDERRRALGLKVGIRKSPHMAFLGNPG 254
           K ++ E+ +EL+ +++GL  +K ++++ A  +L+D  RR L L  G     HM+F G+PG
Sbjct: 22  KTQIQEVLNELNQELIGLVPVKTRIREIAALLLIDRLRRKLELVSG-NPGLHMSFTGSPG 81

Query: 255 TGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKKIKEAEGGILFID 314
           TGKT VA  +  +LH +G +    +  V R DLVG+++GHT PKT++ +K+A GG+LFID
Sbjct: 82  TGKTTVAMKMADILHRLGYIKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKQAMGGVLFID 141

Query: 315 EAYRLIPMQKSDDKDYGLEALEEIMSVMDS--GNIVVIFAGYCEPMQRVISSNEGFHRRV 374
           EAY L   +  +++DYG EA+E ++ VM++   ++VVIFAGY + M++   SN G   RV
Sbjct: 142 EAYYL--YKADNERDYGSEAIEILLQVMENQRNDLVVIFAGYKDRMEKFYESNPGLSSRV 201

Query: 375 TKFFYFNDFNSEELAKILHIKMDNQ 397
                F D+ SEEL +I  + ++ Q
Sbjct: 202 ANHVDFPDYTSEELLQIAKMMIEEQ 223

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BLAST of CmaCh06G016100 vs. ExPASy Swiss-Prot
Match: O22034 (Protein CfxQ homolog OS=Cyanidium caldarium OX=2771 GN=cfxQ PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-34
Identity = 81/198 (40.91%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 201 LDDELSKIVGLHELKIQLQKWAKGILLDERRRALGLKVGIRKSPHMAFLGNPGTGKTMVA 260
           LDD   +++GL  +K ++++ A  +L+D  R+ LGL        HM+F G+PGTGKT VA
Sbjct: 18  LDDLDRELIGLQAVKTRIREIAALLLVDRLRQKLGLS-SSNPGLHMSFTGSPGTGKTTVA 77

Query: 261 RILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKKIKEAEGGILFIDEAYRLIP 320
             +  +L+ +G +    +  V R DLVG+++GHT PKT++ +K A GG+LFIDEAY L  
Sbjct: 78  TKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQVLKNAMGGVLFIDEAYYL-- 137

Query: 321 MQKSDDKDYGLEALEEIMSVMDS--GNIVVIFAGYCEPMQRVISSNEGFHRRVTKFFYFN 380
            +  +++DYG EA+E ++ VM++   ++V+IFAGY E M R  +SN G   RV     F 
Sbjct: 138 YRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKEKMDRFYASNPGLSSRVANHVNFP 197

Query: 381 DFNSEELAKILHIKMDNQ 397
           D+  EEL  I  I +  Q
Sbjct: 198 DYTPEELLMIGKIMLQEQ 212

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BLAST of CmaCh06G016100 vs. ExPASy Swiss-Prot
Match: O22025 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cyanidioschyzon merolae (strain 10D) OX=280699 GN=Rca PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-34
Identity = 84/219 (38.36%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 182 QKRRKAIEACSETKAKMME--LDDELSKIVGLHELKIQLQKWAKGILLDERRRALGLKVG 241
           Q  ++ +   +E K   ++  LDD   +++GL  +K ++++ A  +L+D  R+ LGL   
Sbjct: 4   QTSQQTVNLQTEFKQTQIQEVLDDLDRELIGLQTVKTRIREIAALLLVDRLRQKLGLS-S 63

Query: 242 IRKSPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTR 301
                HM+F G+PGTGKT VAR +  +L+ +G +    +  V R DLVG+++GHT PKT+
Sbjct: 64  SNPGLHMSFTGSPGTGKTTVARKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTK 123

Query: 302 KKIKEAEGGILFIDEAYRLIPMQKSDDKDYGLEALEEIMSVMDS--GNIVVIFAGYCEPM 361
           + +K A GG+LFIDEAY L   +  +++DYG EA+E ++ VM++   ++V+IFAGY + M
Sbjct: 124 QVLKNAMGGVLFIDEAYYL--YRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKDKM 183

Query: 362 QRVISSNEGFHRRVTKFFYFNDFNSEELAKILHIKMDNQ 397
            R  +SN G   RV     F D+  EEL  I  I +  Q
Sbjct: 184 DRFYTSNPGLASRVANHVNFPDYTPEELLMIGKIMLQEQ 219

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BLAST of CmaCh06G016100 vs. ExPASy Swiss-Prot
Match: P49826 (Protein CfxQ homolog OS=Trieres chinensis OX=1514140 GN=cfxQ PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.0e-34
Identity = 83/205 (40.49%), Postives = 130/205 (63.41%), Query Frame = 0


Query: 196 AKMMELDDELSKIVGLHELKIQLQKWAKGILLDERRRALGLKVGIRKSP--HMAFLGNPG 255
           AK++ L +E  ++VGL  +K ++++ A  +L+D+ R+ LG+  G   SP  HM+F G+PG
Sbjct: 20  AKILNLLNE--ELVGLVPVKSRIREIAALLLIDKLRKNLGITAG---SPGLHMSFTGSPG 79

Query: 256 TGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKKIKEAEGGILFID 315
           TGKT V   +  +L  +G +    +  V R DLVG+++GHT PKT++ +K+A GG+LFID
Sbjct: 80  TGKTTVGLKMSDILFQLGYIKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGVLFID 139

Query: 316 EAYRLIPMQKSDDKDYGLEALEEIMSVMDS--GNIVVIFAGYCEPMQRVISSNEGFHRRV 375
           EAY L   +  +++DYG EA+E ++ VM++   ++VVI AGY EPM +   SN G   R+
Sbjct: 140 EAYYL--YKPDNERDYGSEAIEILLQVMENQRDDLVVILAGYKEPMDKFYESNPGLSSRI 199

Query: 376 TKFFYFNDFNSEELAKILHIKMDNQ 397
                F D+  EEL KI  + ++ Q
Sbjct: 200 ANHIDFPDYTVEELLKISKMMLEEQ 217

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BLAST of CmaCh06G016100 vs. TAIR 10
Match: AT3G24530.1 (AAA-type ATPase family protein / ankyrin repeat family protein )

HSP 1 Score: 711.4 bits (1835), Expect = 4.7e-205
Identity = 346/473 (73.15%), Postives = 416/473 (87.95%), Query Frame = 0


Query: 7   QRSRPSKPTTIHSYAQSGNILSLQKLLQENPGLLNDRNPVMGQTPLHVSAGYNRAEIVKF 66
           QR R ++PTTIH  A SG++++LQ+LL++NP LLN+RNPVM  TPLHVSAG    +IVK+
Sbjct: 9   QRLRSARPTTIHDCALSGDLIALQRLLKDNPSLLNERNPVMYHTPLHVSAGNGNVDIVKY 68

Query: 67  LLVWQGPEKVELEAKNMYGETPLHMAAKHGCNDAARALLAHGAFVEAKANNGMTPLHLAV 126
           LL W G +KVELEA N YGETPLHMAAK+GCN+AA+ LL  GAF+EAKA+NGMTPLHLAV
Sbjct: 69  LLAWTGSDKVELEAMNTYGETPLHMAAKNGCNEAAKLLLESGAFIEAKASNGMTPLHLAV 128

Query: 127 WYSLQSEDWATVKTLLEYNADCSAKDDEGMTPLSHLSQGSCSKQLRELLNQHLEEQKRRK 186
           WYS+ +++ +TVKTLL++NADCSAKD+EGMTPL HL QG  S++LRELL   L+EQ++R 
Sbjct: 129 WYSITAKEISTVKTLLDHNADCSAKDNEGMTPLDHLPQGQGSEKLRELLRWFLQEQRKRS 188

Query: 187 AIEACSETKAKMMELDDELSKIVGLHELKIQLQKWAKGILLDERRRALGLKVGIRKSPHM 246
           A+E C +TKAKM  L+DELS IVGL ELK QL+KWAKG+LLDERRRALGL +G R+ PHM
Sbjct: 189 ALEQCGKTKAKMELLEDELSNIVGLSELKTQLRKWAKGMLLDERRRALGLNIGTRRPPHM 248

Query: 247 AFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRKKIKEAE 306
           AFLGNPGTGKTMVAR+LGKLL+ VGILPTDKVTEVQRTDLVGEFVGHTGPKTR+KI+EAE
Sbjct: 249 AFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQEAE 308

Query: 307 GGILFIDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGNIVVIFAGYCEPMQRVISSNEG 366
           GGILF+DEAYRLIPMQK+DDKDYGLEALEEIMSVMD+G IVVIFAGY EPM+RVI+SNEG
Sbjct: 309 GGILFVDEAYRLIPMQKADDKDYGLEALEEIMSVMDTGKIVVIFAGYSEPMKRVIASNEG 368

Query: 367 FHRRVTKFFYFNDFNSEELAKILHIKMDNQTEDSLLYGFKLHPTCTVEAISELIERETQE 426
           F RRVTKFF F+DF+++ELA+ILHIKM+NQ ED+L YGF+LH +CT++ I+ LIE ET E
Sbjct: 369 FCRRVTKFFNFSDFSAKELAQILHIKMNNQGEDTLFYGFRLHESCTLQEIASLIEAETTE 428

Query: 427 RQRKEMNGGLIDPMLVNAKENLDGRLSFECIDTEELCSITMNDLEAGLRLLTK 480
           +QRKEMNGGL+D +LVNA+ENLD RLSFEC+DTEE+C+I + DLEAGLR+ ++
Sbjct: 429 KQRKEMNGGLVDTLLVNARENLDLRLSFECVDTEEICTIKLEDLEAGLRVFSQ 481

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BLAST of CmaCh06G016100 vs. TAIR 10
Match: AT2G03430.1 (Ankyrin repeat family protein )

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-09
Identity = 54/164 (32.93%), Postives = 74/164 (45.12%), Query Frame = 0


Query: 17  IHSYAQSGN--ILSLQKLLQENPGLLNDRNPVMGQTPLHVSAGYNRAEIVKFLLVWQGPE 76
           +H  A  G+  I+ L     E   ++N ++   G  PLH +A    AE+V+ LL      
Sbjct: 51  LHVAASFGHSQIVKLLSSSDEAKTVINSKDD-EGWAPLHSAASIGNAELVEVLLT----R 110

Query: 77  KVELEAKNMYGETPLHMAAKHGCNDAARALLAHGAFVEAKANNGMTPLHLAVWYSLQSED 136
             ++ AKN  G T LH AA  G  + A+ LL HGA +      G TPLH A         
Sbjct: 111 GADVNAKNNGGRTALHYAASKGRLEIAQLLLTHGAKINITDKVGCTPLHRAA----SVGK 170

Query: 137 WATVKTLLEYNADCSAKDDEGMTPLSHLSQGSCSKQLRELLNQH 179
               + L+E  A+  A D  G T L H S     KQ+  LL +H
Sbjct: 171 LEVCEFLIEEGAEIDATDKMGQTALMH-SVICDDKQVAFLLIRH 204

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BLAST of CmaCh06G016100 vs. TAIR 10
Match: AT5G51160.1 (Ankyrin repeat family protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-08
Identity = 54/174 (31.03%), Postives = 86/174 (49.43%), Query Frame = 0


Query: 31  KLLQENPGLLNDRNPVMGQTPLHVSAGYNRAEIVKFLLVWQGPEKVELEAKNMYGETPLH 90
           K+L++      D+N   G +PLH +A   + E V+  L   G EK     K+  G+TPLH
Sbjct: 33  KILRQRSVFDLDKN---GFSPLHAAAAAGQVETVRATL---GVEKKLCRLKDRDGKTPLH 92

Query: 91  MAAKHGCNDAARALLAHGA-FVEAKANNGMTPLHLAVWYSLQSEDWATVKTLLEYNA--D 150
           +A   G  D  R ++A     +E +   G T LHLAV +       A V+ + E N    
Sbjct: 93  VATMRGKIDVIREIVASCVDCLEDETVQGQTALHLAVLHLEIEAVIAIVELITETNRFDV 152

Query: 151 CSAKDDEGMTPLSHLSQGSCSKQLRELLNQHLEEQKRRKAIEACSETKAKMMEL 202
            + KD++G T L HL+    ++Q+ E+L Q + E+ R   + A ++     M+L
Sbjct: 153 LNKKDEQGNTAL-HLATWRKNRQVIEVLVQAIPEESRSFEVNAMNKMGLSAMDL 199

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BLAST of CmaCh06G016100 vs. TAIR 10
Match: AT4G27780.1 (acyl-CoA binding protein 2 )

HSP 1 Score: 56.6 bits (135), Expect = 6.3e-08
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 76  VELEAKNMYGETPLHMAAKHGCNDAARALLAHGAFVEAKANNGMTPLHLAVWYSLQSEDW 135
           + + A++  G TPLH A   G  + A+ L+   A V AK N G TPLH    Y++  +  
Sbjct: 257 IPVNARDSEGRTPLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLH----YAVVCDRE 316

Query: 136 ATVKTLLEYNADCSAKDDEGMTPL 160
           A  + L++ NA+ +AKD++G +PL
Sbjct: 317 AIAEFLVKQNANTAAKDEDGNSPL 336

[Close]

BLAST of CmaCh06G016100 vs. TAIR 10
Match: AT2G28840.1 (XB3 ortholog 1 in Arabidopsis thaliana )

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-07
Identity = 45/157 (28.66%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 17  IHSYAQSGNILSLQKLLQENPGLLNDRNPVMGQTPLHVSAGYNRAEIVKFLLV-WQGPEK 76
           I +  Q G+I+++++++   P LLN   P    + LHV+A   + EI+  LL  +  P+ 
Sbjct: 15  IFASVQCGDIITIRRVMATEPSLLNQTTPYDRHSVLHVAAANGQIEILSLLLERFTNPDL 74

Query: 77  VELEAKNMYGETPLHMAAKHGCNDAARALLAHGA-FVEAKANNGMTPLHLAVWYS----- 136
           +     N + +TPL +AA +G     + L   GA  +   + N  T LH A +Y      
Sbjct: 75  L-----NRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHYAAYYGHANCV 134

Query: 137 ---LQSEDWATVKTLLEYNADCSAKDDEGMTPLSHLS 164
              L +   + V     Y    + +DD+G TPL HL+
Sbjct: 135 QAILSAAQSSPVAVHWGYARFVNIRDDKGATPL-HLA 165

The following BLAST results are available for this feature:

BLAST of CmaCh06G016100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P95648	3.5e-35	41.15	Protein CbbX OS=Rhodobacter sphaeroides OX=1063 GN=cbbX PE=1 SV=1	[more]
P51228	4.5e-35	40.49	Protein CfxQ homolog OS=Porphyra purpurea OX=2787 GN=cfxQ PE=3 SV=1	[more]
O22034	1.7e-34	40.91	Protein CfxQ homolog OS=Cyanidium caldarium OX=2771 GN=cfxQ PE=3 SV=1	[more]
O22025	3.8e-34	38.36	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cyanidios...	[more]
P49826	5.0e-34	40.49	Protein CfxQ homolog OS=Trieres chinensis OX=1514140 GN=cfxQ PE=3 SV=1	[more]

BLAST of CmaCh06G016100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24530.1	4.7e-205	73.15	AAA-type ATPase family protein / ankyrin repeat family protein	[more]
AT2G03430.1	3.3e-09	32.93	Ankyrin repeat family protein	[more]
AT5G51160.1	2.2e-08	31.03	Ankyrin repeat family protein	[more]
AT4G27780.1	6.3e-08	36.90	acyl-CoA binding protein 2	[more]
AT2G28840.1	1.8e-07	28.66	XB3 ortholog 1 in Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 413..433
None	No IPR available	PANTHER	PTHR43392:SF3	PROTEIN CFXQ HOMOLOG	coord: 1..479
None	No IPR available	PANTHER	PTHR43392	AAA-TYPE ATPASE FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEIN	coord: 1..479
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 117..153 score: 9.675228
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 47..68 score: 9.250726
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 84..109 score: 10.895672
None	No IPR available	CDD	cd00009	AAA	coord: 225..351 e-value: 5.19547E-12 score: 61.7783
IPR000641	CbxX/CfxQ	PRINTS	PR00819	CBXCFQXSUPER	coord: 297..316 score: 64.38 coord: 366..385 score: 33.12 coord: 204..218 score: 29.58 coord: 245..260 score: 75.0 coord: 349..366 score: 47.57 coord: 283..297 score: 60.42
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 85..100 score: 42.34 coord: 137..151 score: 34.4
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 47..78 e-value: 230.0 score: 9.7 coord: 12..42 e-value: 770.0 score: 5.8 coord: 84..113 e-value: 3.0E-4 score: 30.1 coord: 117..150 e-value: 0.0066 score: 25.7
IPR002110	Ankyrin repeat	PFAM	PF00023	Ank	coord: 47..72 e-value: 0.0067 score: 16.8
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 84..116 score: 12.075089
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 117..153 score: 11.35392
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 47..68 score: 9.27054
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 242..372 e-value: 2.9E-5 score: 33.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 173..378 e-value: 2.9E-45 score: 156.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 202..448
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 3..172 e-value: 8.5E-34 score: 118.5
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 15..176
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 246..365 e-value: 4.9E-14 score: 52.9
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 82..152 e-value: 4.8E-12 score: 46.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G016100.1	CmaCh06G016100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0005515	protein binding