CmaCh06G015890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G015890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	diacylglycerol O-acyltransferase 3, cytosolic-like
Location	Cma_Chr06: 9918149 .. 9920185 (-)
RNA-Seq Expression	CmaCh06G015890
Synteny	CmaCh06G015890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACGACTCGTTGCTTCTTTTTCCTTCAAATTTTCAATCAATCAATTCTTCCGAAGCCACGTTCCCTACATCCATGGAGGTCTCTGGTGCCGTTTCCCGGCGACTTCCCGGCCTCATCCGCCGAGAGATTGCTCAATCTTCCGTGGAGGTCTCCGGTCATGATGCCCGGCGGGCACCCTGTAGCCTGTCCATTTCCGGTGGCTCTGTTGGTACTGAAACCCGTGATTTCGGCCTCCACGTTCGTCGGAATATAAATTCTCCTAGGTTTAGCGATGACGGTCATGTGCGGTATTATGTTGGAACGAGGTGCCATGGGGGCAGATTGAAGAAGGAGAAGGAGGCGGTGAAGAAGAAATTGAAATTGCTGAAAGGATTGCCTGGTGATTCATCTGCGGCTCTTGCATTCGGCTTCGTGTTTCGTTTTGATGATAGCTCGGTCGGCGAGTTTCAGGCGGATCGCTTCTCTGTAAGTCGAACGATTCGTAATTTCTCTCCTCTATCGTTATTAAAATCTTATGATTCGAATCCTGTTTGCTCGCGCCACTTGATAGTTGATCTGTAATGGCTGAATAATTTGATGCTTTCATTTCTAGTATTCATCATATCATGTTGAATTGGAGTTGATTTAAAGATTTACTTGCATTCATTCGCCATGGGACTCTTCTGTTTTCGCTTTGATCATCCAAAGAATCGCTCTAGAACTCAGTTTCCATTATTGGTTTGTTTTTTTTGGTGTGTTTTTGGCTGCATAGATTAGTTGATAACATTTTTGTTGATCAGATTGAGGAAACGAGAGAGGTGTTGGAAAGACAGCTTCAACAGCTAAAAGCAGAGGAGAAGGAACAGAAAAGAAAAAGGAAGCTAGAAAAGGCCAAGCTGAAAGCAGCTCGATTACCAACGGCTTACGATTCATCATCTTCATCCTCCGAATCCAGCGCCATTGAAGGCAATATGACCAACACAAGGTACCGAACAAGGAAGGCGAGTTCACCCACACTTTCGCAGTTATTCTCGGATCAATGGCAGGCAAATGCCATTCAAGGATCAGCATTGGCTCCTCCATTGCAGACCCATCAGCTCAATTCAAACATCGGAAACTTCGGTGTTGCTCGGTCGGCGTCTGTAGGGAGGGTTGAAGTGTGTATGGGAAACAAGTGCAAGAAAGCTGGGGCAGCGGCATTGATGGAGGAATTCGGGAGGGTGATGGGGGCAGACAGTGTTGTTTGTGGGTGTAAATGCATGGGAAGATGCAGAGATGGACCAAATGTGAGAGTTTCTGGTTCTTTGGACATGGAAACTGGCTCTGCAAATCCTCTGTGCATTGGAGTTGGAGTGGAGGATGTTGGTAGAATTGTGGCTGATCGTCTAGGAGGACAAGGGGAGCAGAAACAATCTAGGTTTGCACCTTCAATTTGATGGCTTCATGGGAGAAGTTAATTTAGTGTAGTTTTATGAGTTTGTAAAAAGTTTATCATCTTCCTTAATGGGTTACACTGGGTTAGTTTGGATTAGGGAAATTTTGGATCCAATCCAGCTGCTTGTACTGTGAAGTTCAGGTAGATGGAGGATCATTTTAGCCTCTTTTAGTGTGTTTCTGACTAATTTGTTGTATCGTCCGTTCACCGTTCGGGTGCTTGAATCACAAGAGTTACTACTAATATAGATAATTTGCTTCGTAAAAATCAAACAGAACATTTTCTTATATGATAAATAAAATATGTGAATTATGTTATTTACAATGAGTCAACGAAGGTATATAAAACAGACTTTTAGGGAATCTTTTTCGAATCTGTTTTATGAACATGTGCTTTTGTTAAAAACTTGTACAGTTATTTTGAGTTGTAAAAATACATGGTTTTACTTACCACTCAAAATAACCAATACAGATGTTTTACTATTTGATGGTTGGTTTTTCAAACCAAATTATCTGGGTCAGTAGTAACTCCTGTGATTGCGTTGATGACGGTTGATGAACACGGGTGTGACTATTAAATGCAGGTACCAAAAATTAAAATTCTAACTATTCTTAATTAAG

mRNA sequence

AATTACGACTCGTTGCTTCTTTTTCCTTCAAATTTTCAATCAATCAATTCTTCCGAAGCCACGTTCCCTACATCCATGGAGGTCTCTGGTGCCGTTTCCCGGCGACTTCCCGGCCTCATCCGCCGAGAGATTGCTCAATCTTCCGTGGAGGTCTCCGGTCATGATGCCCGGCGGGCACCCTGTAGCCTGTCCATTTCCGGTGGCTCTGTTGGTACTGAAACCCGTGATTTCGGCCTCCACGTTCGTCGGAATATAAATTCTCCTAGGTTTAGCGATGACGGTCATGTGCGGTATTATGTTGGAACGAGGTGCCATGGGGGCAGATTGAAGAAGGAGAAGGAGGCGGTGAAGAAGAAATTGAAATTGCTGAAAGGATTGCCTGGTGATTCATCTGCGGCTCTTGCATTCGGCTTCGTGTTTCGTTTTGATGATAGCTCGGTCGGCGAGTTTCAGGCGGATCGCTTCTCTATTGAGGAAACGAGAGAGGTGTTGGAAAGACAGCTTCAACAGCTAAAAGCAGAGGAGAAGGAACAGAAAAGAAAAAGGAAGCTAGAAAAGGCCAAGCTGAAAGCAGCTCGATTACCAACGGCTTACGATTCATCATCTTCATCCTCCGAATCCAGCGCCATTGAAGGCAATATGACCAACACAAGGTACCGAACAAGGAAGGCGAGTTCACCCACACTTTCGCAGTTATTCTCGGATCAATGGCAGGCAAATGCCATTCAAGGATCAGCATTGGCTCCTCCATTGCAGACCCATCAGCTCAATTCAAACATCGGAAACTTCGGTGTTGCTCGGTCGGCGTCTGTAGGGAGGGTTGAAGTGTGTATGGGAAACAAGTGCAAGAAAGCTGGGGCAGCGGCATTGATGGAGGAATTCGGGAGGGTGATGGGGGCAGACAGTGTTGTTTGTGGGTGTAAATGCATGGGAAGATGCAGAGATGGACCAAATGTGAGAGTTTCTGGTTCTTTGGACATGGAAACTGGCTCTGCAAATCCTCTGTGCATTGGAGTTGGAGTGGAGGATGTTGGTAGAATTGTGGCTGATCGTCTAGGAGGACAAGGGGAGCAGAAACAATCTAGGTTTGCACCTTCAATTTGATGGCTTCATGGGAGAAGTTAATTTAGTGTAGTTTTATGAGTTTGTAAAAAGTTTATCATCTTCCTTAATGGGTTACACTGGGTTAGTTTGGATTAGGGAAATTTTGGATCCAATCCAGCTGCTTGTACTGTGAAGTTCAGGTAGATGGAGGATCATTTTAGCCTCTTTTAGTGTGTTTCTGACTAATTTGTTGTATCGTCCGTTCACCGTTCGGGTGCTTGAATCACAAGAGTTACTACTAATATAGATAATTTGCTTCGTAAAAATCAAACAGAACATTTTCTTATATGATAAATAAAATATGTGAATTATGTTATTTACAATGAGTCAACGAAGGTATATAAAACAGACTTTTAGGGAATCTTTTTCGAATCTGTTTTATGAACATGTGCTTTTGTTAAAAACTTGTACAGTTATTTTGAGTTGTAAAAATACATGGTTTTACTTACCACTCAAAATAACCAATACAGATGTTTTACTATTTGATGGTTGGTTTTTCAAACCAAATTATCTGGGTCAGTAGTAACTCCTGTGATTGCGTTGATGACGGTTGATGAACACGGGTGTGACTATTAAATGCAGGTACCAAAAATTAAAATTCTAACTATTCTTAATTAAG

Coding sequence (CDS)

ATGGAGGTCTCTGGTGCCGTTTCCCGGCGACTTCCCGGCCTCATCCGCCGAGAGATTGCTCAATCTTCCGTGGAGGTCTCCGGTCATGATGCCCGGCGGGCACCCTGTAGCCTGTCCATTTCCGGTGGCTCTGTTGGTACTGAAACCCGTGATTTCGGCCTCCACGTTCGTCGGAATATAAATTCTCCTAGGTTTAGCGATGACGGTCATGTGCGGTATTATGTTGGAACGAGGTGCCATGGGGGCAGATTGAAGAAGGAGAAGGAGGCGGTGAAGAAGAAATTGAAATTGCTGAAAGGATTGCCTGGTGATTCATCTGCGGCTCTTGCATTCGGCTTCGTGTTTCGTTTTGATGATAGCTCGGTCGGCGAGTTTCAGGCGGATCGCTTCTCTATTGAGGAAACGAGAGAGGTGTTGGAAAGACAGCTTCAACAGCTAAAAGCAGAGGAGAAGGAACAGAAAAGAAAAAGGAAGCTAGAAAAGGCCAAGCTGAAAGCAGCTCGATTACCAACGGCTTACGATTCATCATCTTCATCCTCCGAATCCAGCGCCATTGAAGGCAATATGACCAACACAAGGTACCGAACAAGGAAGGCGAGTTCACCCACACTTTCGCAGTTATTCTCGGATCAATGGCAGGCAAATGCCATTCAAGGATCAGCATTGGCTCCTCCATTGCAGACCCATCAGCTCAATTCAAACATCGGAAACTTCGGTGTTGCTCGGTCGGCGTCTGTAGGGAGGGTTGAAGTGTGTATGGGAAACAAGTGCAAGAAAGCTGGGGCAGCGGCATTGATGGAGGAATTCGGGAGGGTGATGGGGGCAGACAGTGTTGTTTGTGGGTGTAAATGCATGGGAAGATGCAGAGATGGACCAAATGTGAGAGTTTCTGGTTCTTTGGACATGGAAACTGGCTCTGCAAATCCTCTGTGCATTGGAGTTGGAGTGGAGGATGTTGGTAGAATTGTGGCTGATCGTCTAGGAGGACAAGGGGAGCAGAAACAATCTAGGTTTGCACCTTCAATTTGA

Protein sequence

MEVSGAVSRRLPGLIRREIAQSSVEVSGHDARRAPCSLSISGGSVGTETRDFGLHVRRNINSPRFSDDGHVRYYVGTRCHGGRLKKEKEAVKKKLKLLKGLPGDSSAALAFGFVFRFDDSSVGEFQADRFSIEETREVLERQLQQLKAEEKEQKRKRKLEKAKLKAARLPTAYDSSSSSSESSAIEGNMTNTRYRTRKASSPTLSQLFSDQWQANAIQGSALAPPLQTHQLNSNIGNFGVARSASVGRVEVCMGNKCKKAGAAALMEEFGRVMGADSVVCGCKCMGRCRDGPNVRVSGSLDMETGSANPLCIGVGVEDVGRIVADRLGGQGEQKQSRFAPSI

Homology

[Close]

BLAST of CmaCh06G015890 vs. ExPASy Swiss-Prot
Match: Q9C5W0 (Diacylglycerol O-acyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=DGAT3 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 4.2e-35
Identity = 140/358 (39.11%), Postives = 191/358 (53.35%), Query Frame = 0


Query: 1   MEVSGAVSRRLPGLIRREIAQSSVEVSGHDARRAPCSLSISGGSVGTETRDFGLHVRRNI 60
           MEVSG V R++P         SS  V+G    R     S +  +VG  TR F    R  +
Sbjct: 1   MEVSGVVLRQIP-------CVSSGSVAG---LRLVSEFSGNTRTVGFRTRRF----RGIV 60

Query: 61  NSPRFSDDGHVRYYV-GTRCHGGR-----LKKEKEAVKKKLKLLKGLPGDSSAALAFGFV 120
            +  F+D GHV YY+  TRC   +     ++KEK+A+KKK K+LK L  +     + GF 
Sbjct: 61  CNNEFADKGHVNYYIEPTRCGEEKEKVKVMEKEKKALKKKAKVLKSLSKNLDMFSSIGFG 120

Query: 121 FRFDDSSVGEFQADRFSIEETREVLERQLQQLKAEEKEQKRKRKLEKAKLKAARLPTAYD 180
              +   VGE Q    +I E  E+L +QL+QLKAEEK  K++RK EKAK KA +  T  D
Sbjct: 121 LDPEAGLVGEIQTK--TISEATEILVKQLEQLKAEEKILKKQRKEEKAKAKAMKKMTEMD 180

Query: 181 S-SSSSSESSAIE------GNMTNTRYRTRKASSP-----TLSQLFSDQWQANAIQGS-- 240
           S SSSSSESS  +       +M++ R + +    P     T++ L   Q  A + + +  
Sbjct: 181 SESSSSSESSDSDCDKGKVVDMSSLRNKAKPVLEPLQPEATVATLPRIQEDAISCKNTSE 240

Query: 241 ALAPPLQTHQLNSNIGNFG----VARSASV-----GRVEVCMGNKCKKAGAAALMEEFGR 300
           AL   LQT  +  ++ N G       + SV      RVEVCMG KCK++G A L++EF R
Sbjct: 241 ALQIALQTSTIFPSMANPGQTLKTVEAVSVVGLPLNRVEVCMGGKCKRSGGALLLDEFQR 300

Query: 301 VM-GADSVVCGCKCMGRCRDGPNVRVSGSLD-METGS----ANPLCIGVGVEDVGRIV 324
            M G +     CKCMG+CRDGPNVRV    D + T S    +  LC+GVG++DV  IV
Sbjct: 301 AMTGFEGSAVACKCMGKCRDGPNVRVVKETDAVMTDSVRTPSKTLCVGVGLQDVETIV 342

[Close]

BLAST of CmaCh06G015890 vs. TAIR 10
Match: AT1G48300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-29
Identity = 110/269 (40.89%), Postives = 151/269 (56.13%), Query Frame = 0


Query: 84  LKKEKEAVKKKLKLLKGLPGDSSAALAFGFVFRFDDSSVGEFQADRFSIEETREVLERQL 143
           ++KEK+A+KKK K+LK L  +     + GF    +   VGE Q    +I E  E+L +QL
Sbjct: 1   MEKEKKALKKKAKVLKSLSKNLDMFSSIGFGLDPEAGLVGEIQTK--TISEATEILVKQL 60

Query: 144 QQLKAEEKEQKRKRKLEKAKLKAARLPTAYDS-SSSSSESSAIE------GNMTNTRYRT 203
           +QLKAEEK  K++RK EKAK KA +  T  DS SSSSSESS  +       +M++ R + 
Sbjct: 61  EQLKAEEKILKKQRKEEKAKAKAMKKMTEMDSESSSSSESSDSDCDKGKVVDMSSLRNKA 120

Query: 204 RKASSP-----TLSQLFSDQWQANAIQGS--ALAPPLQTHQLNSNIGNFG----VARSAS 263
           +    P     T++ L   Q  A + + +  AL   LQT  +  ++ N G       + S
Sbjct: 121 KPVLEPLQPEATVATLPRIQEDAISCKNTSEALQIALQTSTIFPSMANPGQTLKTVEAVS 180

Query: 264 V-----GRVEVCMGNKCKKAGAAALMEEFGRVM-GADSVVCGCKCMGRCRDGPNVRVSGS 323
           V      RVEVCMG KCK++G A L++EF R M G +     CKCMG+CRDGPNVRV   
Sbjct: 181 VVGLPLNRVEVCMGGKCKRSGGALLLDEFQRAMTGFEGSAVACKCMGKCRDGPNVRVVKE 240

The following BLAST results are available for this feature:

BLAST of CmaCh06G015890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5W0	4.2e-35	39.11	Diacylglycerol O-acyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=DGAT3 PE=1...	[more]

BLAST of CmaCh06G015890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48300.1	1.2e-29	40.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 129..163
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 247..338 e-value: 6.9E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..192
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 248..296 e-value: 3.08179E-8 score: 48.3924
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 248..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015890.1	CmaCh06G015890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016746	acyltransferase activity