Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCATGGATTTCACAAGCACACAGCTCTGTTGATGAACAGAGAAGCGAGAGAAGCCAGAGAATGGAGAGAGAGAAAGCAGCAGAAAAGAAAAAGAGTCCTCGAAGAACAAATTAGGATTTTCTTCTCCTTTTTCGGAATATATATATATATATCTATATATGTATATATGTATTTCAAATACTGAAACAACACTCCGGTATTGCTAGTTCGTTCTTTTACGTACGACTGAAAGCTCTCAATTCGTCAAGTTTTTTTTTAAGCACCTAGTGATGAGTGTTTTGTTGTTCTCATTTCTATGAACTGATTTTGGTTTTGTGAATTTTGATCTCTCGTTCTTCGTCGGAGAATCGTGCTTTCTCAGCTCCGGCGCCGCTGTGTACTGAATTGAGAATCCATGGTTAGGATTTGAGGAATTTGTGAAAGTTAGTGGAAGTAAATCGCCGTCTGAAAAATGGTTTCGAGTAATCGGGGGACGAATTCGCATCAGCAACAAGCAGAGTCCTCGAACACGAACACGAACACGAGCCATATGCGATCTAATCGTACAGAATCCATCAGCAAAGCCGTAGCGCAGTACACCATCGATGCTCGTCTTCACGCAGTGTTTGAACAGTCAGGTGAGTCCGGTAAATCTTTTGACTACTCACAATCTATCAGAACCTCGACATCTGTGCCGGAGCAGCAAATTACTGCTTATTTGTCGATGATTCAAAGGGGCGGCCATATCCAGCCCTTTGGATGTATGATAGCTATCGATGAGGCAAATTTTCGGGTTATTGCTTATAGTGAAAACACTAGGGAATTGCTTGGTCTTACTCCTCAATCAGTGCCAAATCTTGAAAAGATAGAGATTCTCACAATTGGGACTGATGTACGGAGCTTGTTCACTTCCAATAGTGCAATTTTGCTTGAGAAAGCATTTGGGGCTCGAGAAATCACTTTGTTAAACCCTGTTTGGATTCATTCTAAGAATTCTTTGAAGCCATTTTATGCTATTTTGCATAGGATTGATGTAGGAATTGTGATTGATTTAGAGCCAGCAAGAACGGAGGATCCTGCCCTTTCTATTGCTGGGGCAGTTCAATCGCAAAAGCTTGCAGTGCGTGCAATTTCTAAGCTACAAGCACTCCCTGGTGGAGATATTAAACTGTTGTGTGATGTTGTGGTTGAGAGTGTTAGGGAGCTTACTGGATACGATCGAGTTATGGTGTATAAGTTTCACGAAGACGAGCACGGTGAGGTTGTGGCTGAAAGCAAGAGGCCTGACTTAGAGCCATACATTGGATTGCATTATCCTTCTACTGATATTCCTCAGGCATCGAGGTTTTTGTTTAAGCAAAACCGTGTTAGAATGATTGTCGATTGCCATGCTTCTCCAGTTCGTGTAATTCAGGCTGCAGGGCTTATGCAACCTCTTTGCTTAGTGGGTTCGACTCTTCGTGCCCCCCATGGCTGTCATTCTCAGTATATGGCCAATATGGGCTCCATTTCGTCGTTAGCAATGGCGGTTGTTATCAATAGTAATGACGATGAAGCTATTGGTGGGAGAAATTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCACCATACTTCGGCTCGGTGTATTCCGTTCCCCCTCCGGTATGCATGTGAGTTTCTAATGCAAGCATTTGGACTTCAACTTAATATGGAATTGCAATTGGCTTCACAGTTGTCTGAGAAACATGTTTTGAGAACTCAAACTCTTTTATGTGACATGCTTCTTCGTGATTCCCCAACTGGCATTATTACTCAGAGTCCAAGCATCATGGACTTAGTAAAGTGTGATGGGGCAGCTCTTTACTATCAAGGGAAGTATTACCCTCTAGGCGTGACGCCAACCGAAGCCCAAATAAAGGACGTCGTGGAATGGTTGCTAGCTTTCCATGGAGATTCAACTGGTTTAAGTACAGATAGCTTGGCCGATGCTGGCTATCCAGGGGCAGCCTTGCTTGGTGGTGCAGTTTGTGGAATGGATGTTGCCTATATCACCAAAAGGGATTTTCTCTTCTGGTTCCGATCGCACACAGGAAAAGAGATCAAGTGGGGCGGCGCAAAGCATCACCCAGCGGATAAGGACGATGGTCAAAGAATGCATCCACGTTCTTCGTTCAAGGCATTTTTAGAAGTAGTAAAATCCCGTAGTTTACCGTGGGAGACTGCAGAAATGGATGCTATTCACTCATTGCAGCTTATTCTTCGAGATTCATTCAAGGATAACGCTGCAATCAATTCGAAAGCCGTTGTGCATCCTCAACTTGGGGATCTCAACTTGCAAGGGACCGATGATCTCAGCTTGGTTGCTAGAGAAATGGTCAGGTTGATCGAGACTGCAACTGCTCCAATCTTTGCTGTAGATGTCGACAGCCGTATCAATGGATGGAACGCTAAGATAGCCGAGTTGACTGGGCTTGCAGTCGAGGAAGCTATGGGGAAATCCCTAGTTCGTGATCTCGTGTATAAAGAATCTGAAGAAATAGTCGACAAACTCGTTTCCCGGGCTTTAAAAGGTAGGTAGCTCAGTTACTTATGGAGCTTTTTTGGCATATATCATAGTTGTTTTATAAATGCAGGTGAAGAAGAAAAGAATATAGAGATAAAAATGAAGACATTTGGGCGAGATCCAGATGATCAAAGACAGCCAATTTTTGTGGCTGTCAATGCTTGTTCTAGCAGGGACTACACTGATAATATAGTAGGCGTTTGTTTTGTTGGTCAAGATCTTACCTGCCAAAAAGTGTTCATGGACAAATTTATTAGCATACAATGTGATTATAAAGCCATTGTTCATAGTCCCAATCCTCTTATCCCTCCAATATTCGCTTCGGACGACAATACGTGTTGCTCGGAATGGAATACCGCCATGGAAAACCTCACCGGATGGTCCAGAGAAGACATAATTGGAAAAATGCTAGTAGGGGAGGTTTTTGGAGATTGTTGTAGACTGAAGGGGTCAGATGAATTGACCAAATTTATGATTGTCTTGCACGGTGCAATTGGAGGGAAGAACAATGAAAAATTCCCCTTTTCTTTTTATGACAAAAAGGGGAAATTTGTGCAGGCTCTCTTGACAGCAAATAAGAGGATGAATATGGAGGGGCAGATTGTTGGAGCTTTCTGCTTTGTTCAGATTGCCAGTCTTGAATTGCAGCGAACTCTTAGAATGCAGAGGCAACAGGAGAAGAACCGGTTTGTAAGGATGAAAGAGCTGGCTTACATTTGCCAGGAAGTGAAGAGTCCTTTGAGCGGTATACGCTTTACTAACTCGCTTCTGGAGGCTACGGATTTGAGTGAAGATCAGAAGCAGTTTCTGGAGACCAGTGTTTCTTGTGAAAAGCAGATGTTAAAGATTATAGAAGATATGGATTTGGAAAGTATTGATGATGGGTGAGTTGTTCTTTTAACAATTATCTATTTGACATCGTGAGGTCATACGCCGGTTGGAGAAGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCTTTTTAAAACTGTGAGGTTGAAGGCGATACGTAATGGGCCAAAGTGGACAATATCTGCTAGCGGTGGGTCTAGGCTGTTACGAATAGTGTCAAAGCTAGACACTAGGTGGTGTGTTAACAAGGACACTGGGTCTCTAAGAGTGGGTGGACTGTGAGGTCCCACATCGGTTGGAGAGGGGAACTAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTTAAAACTGTGAGGTTGATGGGGATACGTAACGGGCAAAGCGGATAATATCTGCTAGCGGAGGGCTAGGGATGTTACAAATGGTATCAGAGCCAGACACCGGGTGGTGTGCCAGCGAGGACGTTGGGCCCCCAAGAGGGGGTGGATTGTGAAGCCTCACATCGGTGGGAGAGGGGAACAAACCATTTCATTCCTTATAAGGGTGTCGAAATCTCTCCCTACTAGACGCATTTTAAAACCGTGAGGCTGATGATGATATGTAACGAGCCAAAACGAATAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGATATCAGAGCCAGACATCGAGTGGTGTGCCAGTGAGGACGCTGGCCCTAAGAGGGGGTGGATTGTGAGATCCCACATCAGTTGGAAGGGAAACAAAACATTTCTTATGAGGGTGTGAAAACCTCTCCATAGTAGATGCGTTTTAAAACCGTGAGACTGACAGCCATACGTAACCGGCCAAAGCGGACAATATCTGCTAGTAGTGGGCTTGAGTTGTTACAATCATAGTAATTTTTATGCTAAATTGTTTATTTTATGCTCGAACTTGCTACCTTTCTCCCGTGCTTTTTTGGATTTATGTAAACCATTCTCCATAGTCAATAACATGTCTTGAGAAGAGTAGCTAATTTTCTGATTTGTTTTGGAATCAGTACAATGGAGATTGAGAAGGGGGAGTTCTTATTGGGAAGTGTTATTAATGCTGTTGTTAGTCAAGCGATGTTACTACTCAGAGAAAGAAACTTACAACTGGTTCGTGATATACCAGAAGAAGTAAAGACTATGGCCGTATATGGCGATCAAGTGAGAATTCAACAGGTCTTAGCTGATTTCTTGTTGAACATGGTGCGTTACGCACCGTCTCCGGAAGGCTGGGTAGAATTACGTGTCTGTCCATTCCTGAAGCAAAACTCGGATCGACTTTGTCTCGCACACACCGAATTCAGGTACTTTAATGTTCGATCATTCTTACAATATGCTTGAGCTGAAGATATTGTAAGTTGGACAAAAAGCACATGATGTAAATGTTAAAAATCACGGACGTCTATAATGGTATGATATTGTTCATTTCGAGCATAAACTCTTGTGGATTTGCTTTTGGTTTCCCCAACAAGCCTTATACCAATGGAGATAGTATTACTTACTTATAAACCTGTGATCTTTCCTTAATTAGCCAATGTGGGACTCCCTCCCAACAATCCTCCTTTTGAACAAAGTATACCATAAAGTCTCCCTTGAGGCCAATGGAGTCCTCGAGCAATCTCCCCTTAATCGAAGCTCAACTCCCTTTTTTGGAGCCTTCAAACAAAACACACAATTTGTTTGACACTTGAGTCACTTTTGACTACATTTTCGAGGTTAGCCTCCCCTGAGACGTATGGAGCCCTCAAACAACTCCCCCTTAATCGAGATTTGACTCTTTTTTTTGGAGCCCTCGAACAAAATACACCATTTGTTTTGACACTTGAGTCACTTTTGACTACACCTTCGAGGCTAGTCTCCCCTGAGGCATATGGAGTCCTCGAAGAACCTCCTCTTAATCGAGGCTCAACTCTTTCTCTAAAGCCCTCAAACAAAATACAGAATTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGTTCACAGCTTCGTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTAAGGGCATGACTCTATATCATGTTAGGAATCACGAACCCTCCACAGTGGTATGATATTGTCCACTTTGAGCATAAACTCTCATGACTTTGCTTTTAGTTTCCCCAAAAGGCCTCGTACCAATGAAGATAGTATTGTTTACTTGTAAACTAACATCTTTTCCTTAATTAGCCAACATCCAACTCCCACCGAGCAGTCCTTAATAGTAAATGCATAGTTATTATGTTTCCTTGTTTCAACAATAGCATTAGTTTCATAAGCAAATGGCTAACATATGTTACTATGATGAAGGATTGTATGCCCTGGGGAAGGTCTACCTCCTGAGTTGATCCAGGACATGTTTCACAGTGGCGGATGGGCGACTCAAGAAGGATTAGGGTTGAGCATGTGCAGAAAGATTCTGAAGCTCATGAAGGGTGAAGTCCAATACATCAGAGAATCTGAAAGATGTTATTTCTTGATCACTCTCGAACTCCCTTTAACAGAGAGAGCCCCCGGCGACGTCAGTTAGCTTCTTTGACCATATACTCGTGTAGTTTTCCAGCCATTGTTTATGAGCATACTAGTCGTCGTCGTCATCGTCATCGTCGAAGCCATG
mRNA sequence
CTTCCATGGATTTCACAAGCACACAGCTCTGTTGATGAACAGAGAAGCGAGAGAAGCCAGAGAATGGAGAGAGAGAAAGCAGCAGAAAAGAAAAAGAGTCCTCGAAGAACAAATTAGGATTTTCTTCTCCTTTTTCGGAATATATATATATATATCTATATATGTATATATGTATTTCAAATACTGAAACAACACTCCGGTATTGCTAGTTCGTTCTTTTACGTACGACTGAAAGCTCTCAATTCGTCAAGTTTTTTTTTAAGCACCTAGTGATGAGTGTTTTGTTGTTCTCATTTCTATGAACTGATTTTGGTTTTGTGAATTTTGATCTCTCGTTCTTCGTCGGAGAATCGTGCTTTCTCAGCTCCGGCGCCGCTGTGTACTGAATTGAGAATCCATGGTTAGGATTTGAGGAATTTGTGAAAGTTAGTGGAAGTAAATCGCCGTCTGAAAAATGGTTTCGAGTAATCGGGGGACGAATTCGCATCAGCAACAAGCAGAGTCCTCGAACACGAACACGAACACGAGCCATATGCGATCTAATCGTACAGAATCCATCAGCAAAGCCGTAGCGCAGTACACCATCGATGCTCGTCTTCACGCAGTGTTTGAACAGTCAGGTGAGTCCGGTAAATCTTTTGACTACTCACAATCTATCAGAACCTCGACATCTGTGCCGGAGCAGCAAATTACTGCTTATTTGTCGATGATTCAAAGGGGCGGCCATATCCAGCCCTTTGGATGTATGATAGCTATCGATGAGGCAAATTTTCGGGTTATTGCTTATAGTGAAAACACTAGGGAATTGCTTGGTCTTACTCCTCAATCAGTGCCAAATCTTGAAAAGATAGAGATTCTCACAATTGGGACTGATGTACGGAGCTTGTTCACTTCCAATAGTGCAATTTTGCTTGAGAAAGCATTTGGGGCTCGAGAAATCACTTTGTTAAACCCTGTTTGGATTCATTCTAAGAATTCTTTGAAGCCATTTTATGCTATTTTGCATAGGATTGATGTAGGAATTGTGATTGATTTAGAGCCAGCAAGAACGGAGGATCCTGCCCTTTCTATTGCTGGGGCAGTTCAATCGCAAAAGCTTGCAGTGCGTGCAATTTCTAAGCTACAAGCACTCCCTGGTGGAGATATTAAACTGTTGTGTGATGTTGTGGTTGAGAGTGTTAGGGAGCTTACTGGATACGATCGAGTTATGGTGTATAAGTTTCACGAAGACGAGCACGGTGAGGTTGTGGCTGAAAGCAAGAGGCCTGACTTAGAGCCATACATTGGATTGCATTATCCTTCTACTGATATTCCTCAGGCATCGAGGTTTTTGTTTAAGCAAAACCGTGTTAGAATGATTGTCGATTGCCATGCTTCTCCAGTTCGTGTAATTCAGGCTGCAGGGCTTATGCAACCTCTTTGCTTAGTGGGTTCGACTCTTCGTGCCCCCCATGGCTGTCATTCTCAGTATATGGCCAATATGGGCTCCATTTCGTCGTTAGCAATGGCGGTTGTTATCAATAGTAATGACGATGAAGCTATTGGTGGGAGAAATTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCACCATACTTCGGCTCGGTGTATTCCGTTCCCCCTCCGGTATGCATGTGAGTTTCTAATGCAAGCATTTGGACTTCAACTTAATATGGAATTGCAATTGGCTTCACAGTTGTCTGAGAAACATGTTTTGAGAACTCAAACTCTTTTATGTGACATGCTTCTTCGTGATTCCCCAACTGGCATTATTACTCAGAGTCCAAGCATCATGGACTTAGTAAAGTGTGATGGGGCAGCTCTTTACTATCAAGGGAAGTATTACCCTCTAGGCGTGACGCCAACCGAAGCCCAAATAAAGGACGTCGTGGAATGGTTGCTAGCTTTCCATGGAGATTCAACTGGTTTAAGTACAGATAGCTTGGCCGATGCTGGCTATCCAGGGGCAGCCTTGCTTGGTGGTGCAGTTTGTGGAATGGATGTTGCCTATATCACCAAAAGGGATTTTCTCTTCTGGTTCCGATCGCACACAGGAAAAGAGATCAAGTGGGGCGGCGCAAAGCATCACCCAGCGGATAAGGACGATGGTCAAAGAATGCATCCACGTTCTTCGTTCAAGGCATTTTTAGAAGTAGTAAAATCCCGTAGTTTACCGTGGGAGACTGCAGAAATGGATGCTATTCACTCATTGCAGCTTATTCTTCGAGATTCATTCAAGGATAACGCTGCAATCAATTCGAAAGCCGTTGTGCATCCTCAACTTGGGGATCTCAACTTGCAAGGGACCGATGATCTCAGCTTGGTTGCTAGAGAAATGGTCAGGTTGATCGAGACTGCAACTGCTCCAATCTTTGCTGTAGATGTCGACAGCCGTATCAATGGATGGAACGCTAAGATAGCCGAGTTGACTGGGCTTGCAGTCGAGGAAGCTATGGGGAAATCCCTAGTTCGTGATCTCGTGTATAAAGAATCTGAAGAAATAGTCGACAAACTCGTTTCCCGGGCTTTAAAAGGTGAAGAAGAAAAGAATATAGAGATAAAAATGAAGACATTTGGGCGAGATCCAGATGATCAAAGACAGCCAATTTTTGTGGCTGTCAATGCTTGTTCTAGCAGGGACTACACTGATAATATAGTAGGCGTTTGTTTTGTTGGTCAAGATCTTACCTGCCAAAAAGTGTTCATGGACAAATTTATTAGCATACAATGTGATTATAAAGCCATTGTTCATAGTCCCAATCCTCTTATCCCTCCAATATTCGCTTCGGACGACAATACGTGTTGCTCGGAATGGAATACCGCCATGGAAAACCTCACCGGATGGTCCAGAGAAGACATAATTGGAAAAATGCTAGTAGGGGAGGTTTTTGGAGATTGTTGTAGACTGAAGGGGTCAGATGAATTGACCAAATTTATGATTGTCTTGCACGGTGCAATTGGAGGGAAGAACAATGAAAAATTCCCCTTTTCTTTTTATGACAAAAAGGGGAAATTTGTGCAGGCTCTCTTGACAGCAAATAAGAGGATGAATATGGAGGGGCAGATTGTTGGAGCTTTCTGCTTTGTTCAGATTGCCAGTCTTGAATTGCAGCGAACTCTTAGAATGCAGAGGCAACAGGAGAAGAACCGGTTTGTAAGGATGAAAGAGCTGGCTTACATTTGCCAGGAAGTGAAGAGTCCTTTGAGCGGTATACGCTTTACTAACTCGCTTCTGGAGGCTACGGATTTGAGTGAAGATCAGAAGCAGTTTCTGGAGACCAGTGTTTCTTGTGAAAAGCAGATGTTAAAGATTATAGAAGATATGGATTTGGAAAGTATTGATGATGGTACAATGGAGATTGAGAAGGGGGAGTTCTTATTGGGAAGTGTTATTAATGCTGTTGTTAGTCAAGCGATGTTACTACTCAGAGAAAGAAACTTACAACTGGTTCGTGATATACCAGAAGAAGTAAAGACTATGGCCGTATATGGCGATCAAGTGAGAATTCAACAGGTCTTAGCTGATTTCTTGTTGAACATGGTGCGTTACGCACCGTCTCCGGAAGGCTGGGTAGAATTACGTGTCTGTCCATTCCTGAAGCAAAACTCGGATCGACTTTGTCTCGCACACACCGAATTCAGGATTGTATGCCCTGGGGAAGGTCTACCTCCTGAGTTGATCCAGGACATGTTTCACAGTGGCGGATGGGCGACTCAAGAAGGATTAGGGTTGAGCATGTGCAGAAAGATTCTGAAGCTCATGAAGGGTGAAGTCCAATACATCAGAGAATCTGAAAGATGTTATTTCTTGATCACTCTCGAACTCCCTTTAACAGAGAGAGCCCCCGGCGACGTCAGTTAGCTTCTTTGACCATATACTCGTGTAGTTTTCCAGCCATTGTTTATGAGCATACTAGTCGTCGTCGTCATCGTCATCGTCGAAGCCATG
Coding sequence (CDS)
ATGGTTTCGAGTAATCGGGGGACGAATTCGCATCAGCAACAAGCAGAGTCCTCGAACACGAACACGAACACGAGCCATATGCGATCTAATCGTACAGAATCCATCAGCAAAGCCGTAGCGCAGTACACCATCGATGCTCGTCTTCACGCAGTGTTTGAACAGTCAGGTGAGTCCGGTAAATCTTTTGACTACTCACAATCTATCAGAACCTCGACATCTGTGCCGGAGCAGCAAATTACTGCTTATTTGTCGATGATTCAAAGGGGCGGCCATATCCAGCCCTTTGGATGTATGATAGCTATCGATGAGGCAAATTTTCGGGTTATTGCTTATAGTGAAAACACTAGGGAATTGCTTGGTCTTACTCCTCAATCAGTGCCAAATCTTGAAAAGATAGAGATTCTCACAATTGGGACTGATGTACGGAGCTTGTTCACTTCCAATAGTGCAATTTTGCTTGAGAAAGCATTTGGGGCTCGAGAAATCACTTTGTTAAACCCTGTTTGGATTCATTCTAAGAATTCTTTGAAGCCATTTTATGCTATTTTGCATAGGATTGATGTAGGAATTGTGATTGATTTAGAGCCAGCAAGAACGGAGGATCCTGCCCTTTCTATTGCTGGGGCAGTTCAATCGCAAAAGCTTGCAGTGCGTGCAATTTCTAAGCTACAAGCACTCCCTGGTGGAGATATTAAACTGTTGTGTGATGTTGTGGTTGAGAGTGTTAGGGAGCTTACTGGATACGATCGAGTTATGGTGTATAAGTTTCACGAAGACGAGCACGGTGAGGTTGTGGCTGAAAGCAAGAGGCCTGACTTAGAGCCATACATTGGATTGCATTATCCTTCTACTGATATTCCTCAGGCATCGAGGTTTTTGTTTAAGCAAAACCGTGTTAGAATGATTGTCGATTGCCATGCTTCTCCAGTTCGTGTAATTCAGGCTGCAGGGCTTATGCAACCTCTTTGCTTAGTGGGTTCGACTCTTCGTGCCCCCCATGGCTGTCATTCTCAGTATATGGCCAATATGGGCTCCATTTCGTCGTTAGCAATGGCGGTTGTTATCAATAGTAATGACGATGAAGCTATTGGTGGGAGAAATTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCACCATACTTCGGCTCGGTGTATTCCGTTCCCCCTCCGGTATGCATGTGAGTTTCTAATGCAAGCATTTGGACTTCAACTTAATATGGAATTGCAATTGGCTTCACAGTTGTCTGAGAAACATGTTTTGAGAACTCAAACTCTTTTATGTGACATGCTTCTTCGTGATTCCCCAACTGGCATTATTACTCAGAGTCCAAGCATCATGGACTTAGTAAAGTGTGATGGGGCAGCTCTTTACTATCAAGGGAAGTATTACCCTCTAGGCGTGACGCCAACCGAAGCCCAAATAAAGGACGTCGTGGAATGGTTGCTAGCTTTCCATGGAGATTCAACTGGTTTAAGTACAGATAGCTTGGCCGATGCTGGCTATCCAGGGGCAGCCTTGCTTGGTGGTGCAGTTTGTGGAATGGATGTTGCCTATATCACCAAAAGGGATTTTCTCTTCTGGTTCCGATCGCACACAGGAAAAGAGATCAAGTGGGGCGGCGCAAAGCATCACCCAGCGGATAAGGACGATGGTCAAAGAATGCATCCACGTTCTTCGTTCAAGGCATTTTTAGAAGTAGTAAAATCCCGTAGTTTACCGTGGGAGACTGCAGAAATGGATGCTATTCACTCATTGCAGCTTATTCTTCGAGATTCATTCAAGGATAACGCTGCAATCAATTCGAAAGCCGTTGTGCATCCTCAACTTGGGGATCTCAACTTGCAAGGGACCGATGATCTCAGCTTGGTTGCTAGAGAAATGGTCAGGTTGATCGAGACTGCAACTGCTCCAATCTTTGCTGTAGATGTCGACAGCCGTATCAATGGATGGAACGCTAAGATAGCCGAGTTGACTGGGCTTGCAGTCGAGGAAGCTATGGGGAAATCCCTAGTTCGTGATCTCGTGTATAAAGAATCTGAAGAAATAGTCGACAAACTCGTTTCCCGGGCTTTAAAAGGTGAAGAAGAAAAGAATATAGAGATAAAAATGAAGACATTTGGGCGAGATCCAGATGATCAAAGACAGCCAATTTTTGTGGCTGTCAATGCTTGTTCTAGCAGGGACTACACTGATAATATAGTAGGCGTTTGTTTTGTTGGTCAAGATCTTACCTGCCAAAAAGTGTTCATGGACAAATTTATTAGCATACAATGTGATTATAAAGCCATTGTTCATAGTCCCAATCCTCTTATCCCTCCAATATTCGCTTCGGACGACAATACGTGTTGCTCGGAATGGAATACCGCCATGGAAAACCTCACCGGATGGTCCAGAGAAGACATAATTGGAAAAATGCTAGTAGGGGAGGTTTTTGGAGATTGTTGTAGACTGAAGGGGTCAGATGAATTGACCAAATTTATGATTGTCTTGCACGGTGCAATTGGAGGGAAGAACAATGAAAAATTCCCCTTTTCTTTTTATGACAAAAAGGGGAAATTTGTGCAGGCTCTCTTGACAGCAAATAAGAGGATGAATATGGAGGGGCAGATTGTTGGAGCTTTCTGCTTTGTTCAGATTGCCAGTCTTGAATTGCAGCGAACTCTTAGAATGCAGAGGCAACAGGAGAAGAACCGGTTTGTAAGGATGAAAGAGCTGGCTTACATTTGCCAGGAAGTGAAGAGTCCTTTGAGCGGTATACGCTTTACTAACTCGCTTCTGGAGGCTACGGATTTGAGTGAAGATCAGAAGCAGTTTCTGGAGACCAGTGTTTCTTGTGAAAAGCAGATGTTAAAGATTATAGAAGATATGGATTTGGAAAGTATTGATGATGGTACAATGGAGATTGAGAAGGGGGAGTTCTTATTGGGAAGTGTTATTAATGCTGTTGTTAGTCAAGCGATGTTACTACTCAGAGAAAGAAACTTACAACTGGTTCGTGATATACCAGAAGAAGTAAAGACTATGGCCGTATATGGCGATCAAGTGAGAATTCAACAGGTCTTAGCTGATTTCTTGTTGAACATGGTGCGTTACGCACCGTCTCCGGAAGGCTGGGTAGAATTACGTGTCTGTCCATTCCTGAAGCAAAACTCGGATCGACTTTGTCTCGCACACACCGAATTCAGGATTGTATGCCCTGGGGAAGGTCTACCTCCTGAGTTGATCCAGGACATGTTTCACAGTGGCGGATGGGCGACTCAAGAAGGATTAGGGTTGAGCATGTGCAGAAAGATTCTGAAGCTCATGAAGGGTGAAGTCCAATACATCAGAGAATCTGAAAGATGTTATTTCTTGATCACTCTCGAACTCCCTTTAACAGAGAGAGCCCCCGGCGACGTCAGTTAG
Protein sequence
MVSSNRGTNSHQQQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIRTSTSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNLEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSNDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKAVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHGAIGGKNNEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDLESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDMFHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTERAPGDVS
Homology
BLAST of CmaCh06G015640 vs. ExPASy Swiss-Prot
Match:
P29130 (Phytochrome B OS=Nicotiana tabacum OX=4097 GN=PHYB PE=2 SV=2)
HSP 1 Score: 1844.7 bits (4777), Expect = 0.0e+00
Identity = 913/1135 (80.44%), Postives = 1024/1135 (90.22%), Query Frame = 0
Query: 1 MVSSNRGTNSHQQ-----QAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQS 60
M S +R +SHQ QA+SS T+ N +SISKA+AQYT DARLHAVFEQS
Sbjct: 1 MASGSRTKHSHQSGQGQVQAQSSGTS------NVNYKDSISKAIAQYTADARLHAVFEQS 60
Query: 61 GESGKSFDYSQSIRTSTS--VPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSE 120
GESGKSFDYSQSI+T+T VPEQQITAYL+ IQRGGHIQPFGCMIA+DEA+FRVIAYSE
Sbjct: 61 GESGKSFDYSQSIKTTTQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSE 120
Query: 121 NTRELLGLTPQSVPNLEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSK 180
N E+L LTPQSVP+LE+ EILT+GTDVR+LFT +S++LLE+AFGAREITLLNP+WIHSK
Sbjct: 121 NACEMLSLTPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSK 180
Query: 181 NSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKL 240
NS KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGD+KL
Sbjct: 181 NSGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKL 240
Query: 241 LCDVVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFL 300
LCD VVESVRELTGYDRVMVYKFHEDEHGEVVAESK PDLEPYIGLHYP+TDIPQASRFL
Sbjct: 241 LCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFL 300
Query: 301 FKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAV 360
FKQNRVRMIVDCHA+PVRV+Q LMQPLCLVGSTLRAPHGCH+QYMANMGSI+SL +AV
Sbjct: 301 FKQNRVRMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAV 360
Query: 361 VINSNDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ 420
+IN ND+EA+GGR+S RLWGLVV HHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ
Sbjct: 361 IINGNDEEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ 420
Query: 421 LSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ 480
LSEKHVLRTQTLLCDMLLRDSPTGI+ QSPSIMDLVKCDGAALY QGKYYPLGVTPTEAQ
Sbjct: 421 LSEKHVLRTQTLLCDMLLRDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQ 480
Query: 481 IKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTG 540
IKD+VEWLL +HGDSTGLSTDSLADAGYPGAALLG AVCGM VAYIT +DFLFWFRSHT
Sbjct: 481 IKDIVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTA 540
Query: 541 KEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSF 600
KEIKWGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSL LILRDSF
Sbjct: 541 KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSF 600
Query: 601 KDNAAINSKAVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAK 660
KD A NSKAVVH QLG++ LQG D+LS VAREMVRLIETATAPIFAVDV+ RINGWNAK
Sbjct: 601 KDAEASNSKAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAK 660
Query: 661 IAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQ 720
+AELT L+VEEAMGKSLV DLV+KES+E +KL+ AL+GEE+KN+EIK++TFG P+
Sbjct: 661 VAELTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFG--PEQL 720
Query: 721 RQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPP 780
++ +FV VNACSS+DYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSPNPLIPP
Sbjct: 721 KKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPP 780
Query: 781 IFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHGA 840
IFASD+NTCCSEWNTAME LTGWSR +IIGKMLVGE+FG CCRLKG D +TKFMIVLH A
Sbjct: 781 IFASDENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNA 840
Query: 841 IGGKNNEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQ 900
IG ++ +KFPFSF+D+ GK+VQALLTANKR+NMEGQI+GAFCF+QIAS ELQ+ LR+QRQ
Sbjct: 841 IGVQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQ 900
Query: 901 QEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKII 960
QEK + +MKELAY+CQE+KSPL+GIRFTNSLLEATDL+E+QKQ+LETS +CE+QM KII
Sbjct: 901 QEKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKII 960
Query: 961 EDMDLESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGD 1020
D+DLE+I+DG++ +EK EF LGSVI+AVVSQ MLLLRER++QL+RDIPEE+KT+ V+GD
Sbjct: 961 RDVDLENIEDGSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGD 1020
Query: 1021 QVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPE 1080
QVRIQQVLADFLLNMVRYAPSP+GWVE+++ P +KQ SD + + H EFRIVCPGEGLPPE
Sbjct: 1021 QVRIQQVLADFLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPE 1080
Query: 1081 LIQDMFHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTER 1129
L+QDMFHS W T+EGLGLSMCRKILKLM G++QYIRESERCYFLI L+LP+T R
Sbjct: 1081 LVQDMFHSSRWVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRR 1126
BLAST of CmaCh06G015640 vs. ExPASy Swiss-Prot
Match:
P34094 (Phytochrome B OS=Solanum tuberosum OX=4113 GN=PHYB PE=3 SV=2)
HSP 1 Score: 1827.8 bits (4733), Expect = 0.0e+00
Identity = 898/1135 (79.12%), Postives = 1016/1135 (89.52%), Query Frame = 0
Query: 1 MVSSNRGTNSHQQQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGK 60
M S +R +SH +++ ++ T+ N +SISKA+AQYT DARLHAVFEQSGESGK
Sbjct: 1 MASGSRTKHSHHSSSQAQSSGTS----NVNYKDSISKAIAQYTADARLHAVFEQSGESGK 60
Query: 61 SFDYSQSIRTST-SVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELL 120
FDYSQS++T+T SVPE+QITAYL+ IQRGGHIQPFGCMIA+DEA+FRVIAYSEN E+L
Sbjct: 61 FFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEML 120
Query: 121 GLTPQSVPNLEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPF 180
LTPQSVP+LEK EILTIGTDVR+LFT +S++LLE+AFGAREITLLNP+WIHSKNS KPF
Sbjct: 121 SLTPQSVPSLEKCEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF 180
Query: 181 YAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVV 240
YAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDIKLLCD VV
Sbjct: 181 YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVV 240
Query: 241 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRV 300
ESVRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQNRV
Sbjct: 241 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRV 300
Query: 301 RMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSND 360
RMIVDCHA+PVRV Q LMQPLCLVGSTLRAPHGCH+QYMANMGSI+SL +AV+IN ND
Sbjct: 301 RMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND 360
Query: 361 DEAI-GGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 420
+EA+ GGRNS RLWGLVV HHTS R IPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH
Sbjct: 361 EEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 420
Query: 421 VLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVV 480
VLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD+V
Sbjct: 421 VLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIV 480
Query: 481 EWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKW 540
EWLLA+HGDSTGLSTDSL DAGYPGAA LG AVCGM VAYIT +DFLFWFRSHT KEIKW
Sbjct: 481 EWLLAYHGDSTGLSTDSLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKW 540
Query: 541 GGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAA 600
GGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRS PWE AEMDAIHSLQLILRDSFKD A
Sbjct: 541 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA 600
Query: 601 INSKAVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELT 660
NSKA+VH LG++ LQG D+LS VAREMVRLIETATAPIFAVDV+ RINGWNAK+AELT
Sbjct: 601 SNSKAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELT 660
Query: 661 GLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIF 720
G++VEEAMGKSLV DLVYKES+E +KL+ AL+GEE+KN+EIK++TFG + + +F
Sbjct: 661 GVSVEEAMGKSLVHDLVYKESQETAEKLLYNALRGEEDKNVEIKLRTFG--AEQLEKAVF 720
Query: 721 VAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASD 780
V VNAC+S+DYT+NIVGVCFVGQD+T +KV MDKFI+IQ DYKAIVHSPNPLIPPIFASD
Sbjct: 721 VVVNACASKDYTNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASD 780
Query: 781 DNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHGAIGGKN 840
+NTCCSEWNTAME LTGWSR +I+GKMLVGE+FG CCRLKG D +TKFMIVLH AIGG++
Sbjct: 781 ENTCCSEWNTAMEKLTGWSRGEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQD 840
Query: 841 NEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNR 900
+KFPFSF+D+ GK+VQALLTANKR+NMEG +GAFCF+QIAS ELQ+ LR+QRQQEK
Sbjct: 841 TDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKC 900
Query: 901 FVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDL 960
+ +MKELAYICQE+KSPL+GIRFTNSLLEAT+L+E+QKQ+LETS +CE+QM KII D+DL
Sbjct: 901 YSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDL 960
Query: 961 ESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQ 1020
E+I+DG++ +EK +F LGSVI+AVVSQ MLLLRE+ +QL+RDIPEE+KT+ V+GDQVRIQ
Sbjct: 961 ENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQ 1020
Query: 1021 QVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDM 1080
QVLADFLLNMVRYAPSP+GWVE+++ P + SD + + H E RI+CPGEGLPPEL+QDM
Sbjct: 1021 QVLADFLLNMVRYAPSPDGWVEIQLRPSMMPISDGVTVVHIELRIICPGEGLPPELVQDM 1080
Query: 1081 FHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTERAPGDV 1134
FHS W TQEGLGLSMCRK+LKLM GE+QYIRESERCYFLI L+LP+T + P V
Sbjct: 1081 FHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFLIILDLPMTRKGPKSV 1129
BLAST of CmaCh06G015640 vs. ExPASy Swiss-Prot
Match:
I1MGE5 (Phytochrome B-2 OS=Glycine max OX=3847 GN=GLYMA_15G140000 PE=1 SV=2)
HSP 1 Score: 1820.8 bits (4715), Expect = 0.0e+00
Identity = 893/1122 (79.59%), Postives = 1006/1122 (89.66%), Query Frame = 0
Query: 11 HQQQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIR- 70
H + + S+ + N ++ +N +S SKA+AQYT DARLHAVFEQSGESG+SFDYSQSIR
Sbjct: 26 HTSRTKLSHHHHNNNNNNNNNIDSTSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRV 85
Query: 71 TSTSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNL 130
TS SVPEQQITAYL IQRGG IQPFG MIA+DE +FR++AYS+N R++LG+TPQSVP+L
Sbjct: 86 TSESVPEQQITAYLLKIQRGGFIQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSL 145
Query: 131 E--KIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPFYAILHRID 190
+ +GTD+R+LFT +SA+LLEKAF AREI+L+NP+WIHS+ S KPFY ILHRID
Sbjct: 146 DDKNDAAFALGTDIRTLFTHSSAVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRID 205
Query: 191 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVVESVRELTG 250
VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGD+KLLCD VVESVRELTG
Sbjct: 206 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTG 265
Query: 251 YDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHA 310
YDRVMVY+FHEDEHGEVVAE+KRPDLEPYIGLHYP+TDIPQASRFLFKQNRVRMIVDCHA
Sbjct: 266 YDRVMVYRFHEDEHGEVVAETKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHA 325
Query: 311 SPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSNDDEAIGGRN 370
S VRV+Q L+QPLCLVGSTLRAPHGCH+QYMANMGS +SL MAV+IN ND+E +GGR
Sbjct: 326 SAVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMANMGSTASLVMAVIINGNDEEGVGGRT 385
Query: 371 STRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLC 430
S RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLA+Q EK VLRTQTLLC
Sbjct: 386 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLC 445
Query: 431 DMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGD 490
DMLLRDSPTGI+TQSPSIMDLVKCDGAALYYQG YYPLGVTPTEAQI+D++EWLLAFH D
Sbjct: 446 DMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRD 505
Query: 491 STGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPAD 550
STGLSTDSLADAGYPGAA LG AVCGM VAYIT++DFLFWFRSHT KEIKWGGAKHHP D
Sbjct: 506 STGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPED 565
Query: 551 KDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKAVVHP 610
KDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFKD NSKAV+ P
Sbjct: 566 KDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDP 625
Query: 611 QLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELTGLAVEEAMG 670
++ +L LQG D+LS VAREMVRLIETATAPIFAVDVD RINGWNAK++ELTGL VEEAMG
Sbjct: 626 RMSELELQGVDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMG 685
Query: 671 KSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSR 730
KSLVRDLV+KESEE VDKL+SRALKGEE+KN+EIKM+TFG P+ Q + +FV VNACSS+
Sbjct: 686 KSLVRDLVFKESEETVDKLLSRALKGEEDKNVEIKMRTFG--PEHQNKAVFVVVNACSSK 745
Query: 731 DYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASDDNTCCSEWN 790
DYT+N+VGVCFVGQD+T QK+ MDKFI+IQ DYKAIVH+PNPLIPPIFASDDNTCC EWN
Sbjct: 746 DYTNNVVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWN 805
Query: 791 TAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHGAIGGKNNEKFPFSFY 850
TAME LTGWSR D+IGKMLVGEVFG CC+LKGSD +TKFMIVLH A+GG + ++FPFSF
Sbjct: 806 TAMEKLTGWSRADVIGKMLVGEVFGSCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFL 865
Query: 851 DKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNRFVRMKELAY 910
D+ GK VQA LTANKR+NM+GQI+GAFCF+QI S ELQ+ L+ QRQQEKN F RMKELAY
Sbjct: 866 DRYGKHVQAFLTANKRVNMDGQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAY 925
Query: 911 ICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDLESIDDGTME 970
ICQ VK+PLSGIRFTNSLLEAT LS +QKQFLETS +CEKQMLKII D+D+ESI+DG++E
Sbjct: 926 ICQGVKNPLSGIRFTNSLLEATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLE 985
Query: 971 IEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLN 1030
+EKGEFLLG+VINAVVSQ MLLLRERNLQL+RDIPEE+KT+AVYGDQ+RIQQVL+DFLLN
Sbjct: 986 LEKGEFLLGNVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLN 1045
Query: 1031 MVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDMFHSGGWATQ 1090
+VRYAPSP+GWVE+ V P +KQ SD L L H EFR+VCPGEGLPPELIQ+MF++ GW TQ
Sbjct: 1046 IVRYAPSPDGWVEIHVHPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQNMFNNSGWGTQ 1105
Query: 1091 EGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTERA 1130
EGLGLSM RKILKLM GEVQYIRE++RCYF + LELP+T R+
Sbjct: 1106 EGLGLSMSRKILKLMNGEVQYIREAQRCYFYVLLELPVTRRS 1145
BLAST of CmaCh06G015640 vs. ExPASy Swiss-Prot
Match:
Q9ZS62 (Phytochrome B1 OS=Solanum lycopersicum OX=4081 GN=PHYB1 PE=2 SV=1)
HSP 1 Score: 1797.7 bits (4655), Expect = 0.0e+00
Identity = 888/1135 (78.24%), Postives = 1007/1135 (88.72%), Query Frame = 0
Query: 1 MVSSNRGTNSHQQQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGK 60
M S +R +S+ ++ ++ TS+M N +SISKA+AQYT DARLHAVFEQSGESGK
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNM--NYKDSISKAIAQYTADARLHAVFEQSGESGK 60
Query: 61 SFDYSQSIRTST-SVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELL 120
SFDYSQS++T+T SVPE+QITAYL+ IQRGGHIQPFGCMIA+DEA+FR+IAYSEN E+L
Sbjct: 61 SFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEML 120
Query: 121 GLTPQSVPNLEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPF 180
LTPQSVP+L+K EILT+GTDVR+LFT +S++LLE+AFGAREITLLNP+WIHSKNS KPF
Sbjct: 121 SLTPQSVPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF 180
Query: 181 YAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVV 240
YAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDIKLLCD VV
Sbjct: 181 YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVV 240
Query: 241 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRV 300
ESVRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQNRV
Sbjct: 241 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRV 300
Query: 301 RMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSND 360
RMIVDCHA+PVRV Q LMQPLCLVGSTLRAPHGCH+QYMANMGSI+SL +AV+IN ND
Sbjct: 301 RMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND 360
Query: 361 DEAI-GGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 420
+EA+ GGRNS RLWGLVV HHTS R IPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH
Sbjct: 361 EEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 420
Query: 421 VLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVV 480
VLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQ KYYPLGVTPTEAQIKD+V
Sbjct: 421 VLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIV 480
Query: 481 EWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKW 540
EWLLA+HGDSTGLSTDSLADAGYPGAA LG AVCGM VAYIT +DFLFWFRSHT KEIKW
Sbjct: 481 EWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKW 540
Query: 541 GGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAA 600
GGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRS PWE AEMDAIHSLQLILRDSFKD A
Sbjct: 541 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA 600
Query: 601 INSKAVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELT 660
NSKA+VH LG++ LQG D+LS VAREMVRLIETATAPIF VDV+ RINGWN K+ ELT
Sbjct: 601 SNSKAIVH-ALGEMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELT 660
Query: 661 GLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIF 720
GL+ EEA GKSLV DL+YKES+E +KL+ AL+G E KN+EIK++TFG + + +F
Sbjct: 661 GLSAEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFG--AEQVEKAVF 720
Query: 721 VAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASD 780
+ VNACSSRDYT++IVGV FVGQD+T +K+ MDKFI IQ DYKAIVHSPNPLIPPIFASD
Sbjct: 721 LVVNACSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 780
Query: 781 DNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHGAIGGKN 840
+NT CSEWNTAME L+GWSRE+I+GKMLVGE+FG CCRLKG D +TKFMIVLH AIGG++
Sbjct: 781 ENTSCSEWNTAMEKLSGWSREEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQD 840
Query: 841 NEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNR 900
+KFPFSF+D+ GK+VQALLTANKR+NMEG +GAFCF+QIAS ELQ+ LR+QRQQEK
Sbjct: 841 TDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKC 900
Query: 901 FVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDL 960
+ +MKELAYICQEVKSPL+GIRFTNSLLEAT+L+E QKQ+LETS +CE+QM KII D+DL
Sbjct: 901 YSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDL 960
Query: 961 ESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQ 1020
E+I+DG++ +EK +F LGSVI+AVVSQ MLLLRE+ +QL+RDIPEE+KT+ V+GDQVRIQ
Sbjct: 961 ENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQ 1020
Query: 1021 QVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDM 1080
QVLADFLLNMVRYAPSP+GWVE+++ P + SD + H E RI+CPGEGLPPEL+QDM
Sbjct: 1021 QVLADFLLNMVRYAPSPDGWVEIQLRPSMMPISDGATVVHIELRIICPGEGLPPELVQDM 1080
Query: 1081 FHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTERAPGDV 1134
FHS W TQEGLGLSMCRK+LKLM GE+QYIRESERCYF+I L+LP+T + P V
Sbjct: 1081 FHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDLPMTRKGPKSV 1130
BLAST of CmaCh06G015640 vs. ExPASy Swiss-Prot
Match:
P14713 (Phytochrome B OS=Arabidopsis thaliana OX=3702 GN=PHYB PE=1 SV=1)
HSP 1 Score: 1723.8 bits (4463), Expect = 0.0e+00
Identity = 862/1138 (75.75%), Postives = 985/1138 (86.56%), Query Frame = 0
Query: 3 SSNRGTNSHQQQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSF 62
SS+ N+ + ++ ++ T + RSN TES+SKA+ QYT+DARLHAVFEQSGESGKSF
Sbjct: 23 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESMSKAIQQYTVDARLHAVFEQSGESGKSF 82
Query: 63 DYSQSIRTST---SVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELL 122
DYSQS++T+T SVPEQQITAYLS IQRGG+IQPFGCMIA+DE++FR+I YSEN RE+L
Sbjct: 83 DYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREML 142
Query: 123 GLTPQSVPNLEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPF 182
G+ PQSVP LEK EIL +GTDVRSLFTS+S+ILLE+AF AREITLLNPVWIHSKN+ KPF
Sbjct: 143 GIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPF 202
Query: 183 YAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVV 242
YAILHRIDVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLCD VV
Sbjct: 203 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 262
Query: 243 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRV 302
ESVR+LTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQNRV
Sbjct: 263 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 322
Query: 303 RMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSND 362
RMIVDC+A+PV V+Q L Q +CLVGSTLRAPHGCHSQYMANMGSI+SLAMAV+IN N+
Sbjct: 323 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 382
Query: 363 DE---AIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 422
D+ GR+S RLWGLVVCHHTS+RCIPFPLRYACEFLMQAFGLQLNMELQLA Q+SE
Sbjct: 383 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 442
Query: 423 KHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD 482
K VLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD
Sbjct: 443 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 502
Query: 483 VVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEI 542
VVEWLLA H DSTGLSTDSL DAGYPGAA LG AVCGM VAYITKRDFLFWFRSHT KEI
Sbjct: 503 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 562
Query: 543 KWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDN 602
KWGGAKHHP DKDDGQRMHPRSSF+AFLEVVKSRS PWETAEMDAIHSLQLILRDSFK++
Sbjct: 563 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 622
Query: 603 -AAINSK---AVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNA 662
AA+NSK VV P QG D+L VAREMVRLIETAT PIFAVD INGWNA
Sbjct: 623 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 682
Query: 663 KIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDD 722
KIAELTGL+VEEAMGKSLV DL+YKE+E V+KL+SRAL+G+EEKN+E+K+KTF P+
Sbjct: 683 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTF--SPEL 742
Query: 723 QRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIP 782
Q + +FV VNACSS+DY +NIVGVCFVGQD+T QK+ MDKFI+IQ DYKAIVHSPNPLIP
Sbjct: 743 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 802
Query: 783 PIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHG 842
PIFA+D+NTCC EWN AME LTGWSR ++IGKM+VGEVFG CC LKG D LTKFMIVLH
Sbjct: 803 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 862
Query: 843 AIGGKNNEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQR 902
AIGG++ +KFPF F+D+ GKFVQALLTANKR+++EG+++GAFCF+QI S ELQ+ L +QR
Sbjct: 863 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 922
Query: 903 QQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKI 962
+Q+ F + KELAYICQ +K+PLSG+RF NSLLEATDL+EDQKQ LETSVSCEKQ+ +I
Sbjct: 923 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 982
Query: 963 IEDMDLESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYG 1022
+ DMDLESI+DG+ +++ EF LGSVINA+VSQAM LLR+R LQL+RDIPEE+K++ V+G
Sbjct: 983 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1042
Query: 1023 DQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPP 1082
DQ+RIQQ+LA+FLL+++RYAPS E WVE+ + KQ +D TEFR+ CPGEGLPP
Sbjct: 1043 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1102
Query: 1083 ELIQDMFHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTERAP 1131
EL++DMFHS W + EGLGLS+CRKILKLM GEVQYIRESER YFLI LELP+ + P
Sbjct: 1103 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKRP 1156
BLAST of CmaCh06G015640 vs. TAIR 10
Match:
AT2G18790.1 (phytochrome B )
HSP 1 Score: 1723.8 bits (4463), Expect = 0.0e+00
Identity = 862/1138 (75.75%), Postives = 985/1138 (86.56%), Query Frame = 0
Query: 3 SSNRGTNSHQQQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSF 62
SS+ N+ + ++ ++ T + RSN TES+SKA+ QYT+DARLHAVFEQSGESGKSF
Sbjct: 23 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESMSKAIQQYTVDARLHAVFEQSGESGKSF 82
Query: 63 DYSQSIRTST---SVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELL 122
DYSQS++T+T SVPEQQITAYLS IQRGG+IQPFGCMIA+DE++FR+I YSEN RE+L
Sbjct: 83 DYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREML 142
Query: 123 GLTPQSVPNLEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPF 182
G+ PQSVP LEK EIL +GTDVRSLFTS+S+ILLE+AF AREITLLNPVWIHSKN+ KPF
Sbjct: 143 GIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPF 202
Query: 183 YAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVV 242
YAILHRIDVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLCD VV
Sbjct: 203 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 262
Query: 243 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRV 302
ESVR+LTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQNRV
Sbjct: 263 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 322
Query: 303 RMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSND 362
RMIVDC+A+PV V+Q L Q +CLVGSTLRAPHGCHSQYMANMGSI+SLAMAV+IN N+
Sbjct: 323 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 382
Query: 363 DE---AIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 422
D+ GR+S RLWGLVVCHHTS+RCIPFPLRYACEFLMQAFGLQLNMELQLA Q+SE
Sbjct: 383 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 442
Query: 423 KHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD 482
K VLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD
Sbjct: 443 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 502
Query: 483 VVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEI 542
VVEWLLA H DSTGLSTDSL DAGYPGAA LG AVCGM VAYITKRDFLFWFRSHT KEI
Sbjct: 503 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 562
Query: 543 KWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDN 602
KWGGAKHHP DKDDGQRMHPRSSF+AFLEVVKSRS PWETAEMDAIHSLQLILRDSFK++
Sbjct: 563 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 622
Query: 603 -AAINSK---AVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNA 662
AA+NSK VV P QG D+L VAREMVRLIETAT PIFAVD INGWNA
Sbjct: 623 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 682
Query: 663 KIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDD 722
KIAELTGL+VEEAMGKSLV DL+YKE+E V+KL+SRAL+G+EEKN+E+K+KTF P+
Sbjct: 683 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTF--SPEL 742
Query: 723 QRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIP 782
Q + +FV VNACSS+DY +NIVGVCFVGQD+T QK+ MDKFI+IQ DYKAIVHSPNPLIP
Sbjct: 743 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 802
Query: 783 PIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHG 842
PIFA+D+NTCC EWN AME LTGWSR ++IGKM+VGEVFG CC LKG D LTKFMIVLH
Sbjct: 803 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 862
Query: 843 AIGGKNNEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQR 902
AIGG++ +KFPF F+D+ GKFVQALLTANKR+++EG+++GAFCF+QI S ELQ+ L +QR
Sbjct: 863 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 922
Query: 903 QQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKI 962
+Q+ F + KELAYICQ +K+PLSG+RF NSLLEATDL+EDQKQ LETSVSCEKQ+ +I
Sbjct: 923 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 982
Query: 963 IEDMDLESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYG 1022
+ DMDLESI+DG+ +++ EF LGSVINA+VSQAM LLR+R LQL+RDIPEE+K++ V+G
Sbjct: 983 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1042
Query: 1023 DQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPP 1082
DQ+RIQQ+LA+FLL+++RYAPS E WVE+ + KQ +D TEFR+ CPGEGLPP
Sbjct: 1043 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1102
Query: 1083 ELIQDMFHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLELPLTERAP 1131
EL++DMFHS W + EGLGLS+CRKILKLM GEVQYIRESER YFLI LELP+ + P
Sbjct: 1103 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKRP 1156
BLAST of CmaCh06G015640 vs. TAIR 10
Match:
AT4G16250.1 (phytochrome D )
HSP 1 Score: 1650.6 bits (4273), Expect = 0.0e+00
Identity = 829/1143 (72.53%), Postives = 963/1143 (84.25%), Query Frame = 0
Query: 3 SSNRGTNSHQQQAESSNTNTNTSHMRSNR--------TESISKAVAQYTIDARLHAVFEQ 62
SS + H AE + ++ N + N+ TES +KA+ QYT+DARLHAVFEQ
Sbjct: 16 SSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQ 75
Query: 63 SGESGKSFDYSQSIRTS---TSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAY 122
SGESGKSFDYSQS++T+ +SVPEQQITAYLS IQRGG+ QPFGC+IA++E+ F +I Y
Sbjct: 76 SGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGY 135
Query: 123 SENTRELLGLTPQSVPNLE-KIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWI 182
SEN RE+LGL QSVP++E K E+LTIGTD+RSLF S+S +LLE+AF AREITLLNP+WI
Sbjct: 136 SENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWI 195
Query: 183 HSKNSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGD 242
HS N+ KPFYAILHR+DVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LP GD
Sbjct: 196 HSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGD 255
Query: 243 IKLLCDVVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQAS 302
IKLLCD VVESVR+LTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQAS
Sbjct: 256 IKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQAS 315
Query: 303 RFLFKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLA 362
RFLFKQNRVRMIVDC+ASPVRV+Q L Q +CLVGSTLRAPHGCH+QYM NMGSI+SLA
Sbjct: 316 RFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLA 375
Query: 363 MAVVINSNDDEA----IGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNM 422
MAV+IN N+++ GGRNS RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNM
Sbjct: 376 MAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNM 435
Query: 423 ELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLG 482
ELQLA Q+SEK VLR QTLLCDMLLRDSP GI+TQ PSIMDLVKC+GAA YQGKYYPLG
Sbjct: 436 ELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLG 495
Query: 483 VTPTEAQIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLF 542
VTPT++QI D+VEWL+A H DSTGLSTDSL DAGYP AA LG AVCGM VA ITKRDFLF
Sbjct: 496 VTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLF 555
Query: 543 WFRSHTGKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQ 602
WFRSHT KEIKWGGAKHHP DKDDGQRM+PRSSF+ FLEVVKSR PWETAEMDAIHSLQ
Sbjct: 556 WFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQ 615
Query: 603 LILRDSFKDNAAINSKA----VVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVD 662
LILRDSFK++ A++SKA V P D+ QG ++ VAREMVRLIETAT PIFAVD
Sbjct: 616 LILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVD 675
Query: 663 VDSRINGWNAKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIK 722
+D INGWNAKIAELTGL+VE+AMGKSLVR+L+YKE +E VD+L+S ALKG+E KN+E+K
Sbjct: 676 IDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVK 735
Query: 723 MKTFGRDPDDQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKA 782
+KTFG + Q + +FV VNACSS+DY +NIVGVCFVGQD+T K+ MDKFI+IQ DYKA
Sbjct: 736 LKTFGSEL--QGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKA 795
Query: 783 IVHSPNPLIPPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDE 842
I+HSPNPLIPPIFA+D+NTCC EWNTAME LTGW R ++IGK+LV EVFG CRLKG D
Sbjct: 796 IIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPDA 855
Query: 843 LTKFMIVLHGAIGGKNNEKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASL 902
LTKFMIVLH AIGG++ +KFPF F+D+KG+F+QALLT NKR++++G+I+GAFCF+QI S
Sbjct: 856 LTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSP 915
Query: 903 ELQRTLRMQRQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETS 962
ELQ+ L +QR+QE F R KELAYI Q +K+PLSG+RFTNSLLE DL+EDQKQ LETS
Sbjct: 916 ELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETS 975
Query: 963 VSCEKQMLKIIEDMDLESIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIP 1022
VSCEKQ+ KI+ DMD++SIDDG+ +E+ EF +G+V NAVVSQ ML++RERNLQL+R+IP
Sbjct: 976 VSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIP 1035
Query: 1023 EEVKTMAVYGDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFR 1082
EVK+MAVYGDQ+R+QQVLA+FLL++VRYAP EG VEL +CP L Q +D EFR
Sbjct: 1036 TEVKSMAVYGDQIRLQQVLAEFLLSIVRYAPM-EGSVELHLCPTLNQMADGFSAVRLEFR 1095
Query: 1083 IVCPGEGLPPELIQDMFHSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLE 1126
+ C GEG+PPE +QDMFHS W + EGLGLS+CRKILKLM G VQYIRE ER YFLI +E
Sbjct: 1096 MACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIE 1155
BLAST of CmaCh06G015640 vs. TAIR 10
Match:
AT4G18130.1 (phytochrome E )
HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 630/1122 (56.15%), Postives = 834/1122 (74.33%), Query Frame = 0
Query: 13 QQAESSNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQS-IRTS 72
+ + S+ +N +SN AQY++DA L A F QS +GKSF+YS+S I
Sbjct: 4 ESSSSAASNMKPQPQKSN--------TAQYSVDAALFADFAQSIYTGKSFNYSKSVISPP 63
Query: 73 TSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPN--- 132
VP++ ITAYLS IQRGG +QPFGC+IA++E +FR++ S+N+ + LGL S+P+
Sbjct: 64 NHVPDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSH 123
Query: 133 ---LEKIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPFYAILHR 192
+K++ L IG D R+LFT +S L KA EI+LLNPV +HS+ + KPFYAILHR
Sbjct: 124 SGEFDKVKGL-IGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHR 183
Query: 193 IDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVVESVREL 252
ID GIV+DLEPA++ DPAL++AGAVQSQKLAVRAIS+LQ+LPGGDI LCD VVE V+ L
Sbjct: 184 IDAGIVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRL 243
Query: 253 TGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDC 312
TGYDRVMVY+FHED+HGEVV+E +R DLEPY+GLHYP+TDIPQA+RFLFKQNRVRMI DC
Sbjct: 244 TGYDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDC 303
Query: 313 HASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSNDDEAIGG 372
+A+PV+V+Q+ L +PLCLV STLRAPHGCH+QYMANMGS++SLA+A+V+ G
Sbjct: 304 NATPVKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVK--------G 363
Query: 373 RNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTL 432
++S++LWGLVV HH S R +PFPLRYACEFLMQAFGLQL MELQLASQL+EK +RTQTL
Sbjct: 364 KDSSKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTL 423
Query: 433 LCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFH 492
LCDMLLRD+ + I+TQSP IMDLVKCDGAALYY+GK + +GVTP E+Q+KD+V WL+ H
Sbjct: 424 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENH 483
Query: 493 G-DSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHH 552
G DSTGL+TDSL DAGYPGA LG AVCG+ A + +D+L WFRS+T IKWGGAKHH
Sbjct: 484 GDDSTGLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHH 543
Query: 553 PADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKAV 612
P DKDD RMHPRSSF AFLEV KSRSLPWE +E+DAIHSL+LI+R+SF + + S
Sbjct: 544 PKDKDDAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRPVLS--- 603
Query: 613 VHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELTGLAVEE 672
G+ + ++L+ EMVR+IETATAPIF VD INGWN K AE+TGL E
Sbjct: 604 -----GNGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASE 663
Query: 673 AMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGR-DPDDQRQPIFVAVNA 732
AMGKSL ++V +ES ++ L+ +AL+GEEEK++ +K++ FG+ + D + V VN+
Sbjct: 664 AMGKSLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNS 723
Query: 733 CSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASDDNTCC 792
C+SRDYT+NI+GVCFVGQD+T +K D+FI +Q DYK IV S NPLIPPIFASD+N CC
Sbjct: 724 CTSRDYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACC 783
Query: 793 SEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGSDELTKFMIVLHGAIGGKN-NEKF 852
SEWN AME LTGWS+ ++IGKML GEVFG C++K D LTKF+I L+ I G N E
Sbjct: 784 SEWNAAMEKLTGWSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESS 843
Query: 853 PFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNRFVRM 912
F++K+GK+++A LTANK N+EG+++ F F+QI + E + ++ ++ +
Sbjct: 844 LVEFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKESGLSCPELKESAQS----L 903
Query: 913 KELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDLESID 972
EL Y+ QE+K+PL+GIRF + LLE++++S Q+QFLETS +CEKQ+ IIE DL+SI+
Sbjct: 904 NELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIE 963
Query: 973 DGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLA 1032
+G +++E EF L ++++ ++SQ M++LRERN QL ++ EE+KT+ + GD+V++Q +LA
Sbjct: 964 EGKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILA 1023
Query: 1033 DFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDMFHS- 1092
D L N+V +AP P WV + + P + + D H +FR++ PG+GLP E++ DMF +
Sbjct: 1024 DLLRNIVNHAPFPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETR 1083
Query: 1093 GGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLEL 1124
GW T +GLGL + RK+L+ M G V Y+RE ERC+F + L++
Sbjct: 1084 DGWVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQVDLQV 1094
BLAST of CmaCh06G015640 vs. TAIR 10
Match:
AT1G09570.1 (phytochrome A )
HSP 1 Score: 1152.5 bits (2980), Expect = 0.0e+00
Identity = 586/1124 (52.14%), Postives = 790/1124 (70.28%), Query Frame = 0
Query: 18 SNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIRTSTSVPEQ 77
S + S S R+ ++ +AQ T+DA+LHA FE ESG SFDYS S+R + V E
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 61
Query: 78 Q-------ITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNLE 137
Q T YL IQ+G IQPFGC++A+DE F+VIAYSEN ELL + +VP++
Sbjct: 62 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVG 121
Query: 138 KIEILTIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPFYAILHRIDVGI 197
+ +L IGTD+RSLFT+ SA L+KA G +++LLNP+ +H + S KPFYAI+HR+ I
Sbjct: 122 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSI 181
Query: 198 VIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVVESVRELTGYDR 257
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCD +V+ V ELTGYDR
Sbjct: 182 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 241
Query: 258 VMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPV 317
VM YKFHED+HGEVV+E +P LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 242 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 301
Query: 318 RVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSNDDEAIGGRNST- 377
RV+Q L L L GSTLRAPH CH QYMANM SI+SL MAVV+N D E +T
Sbjct: 302 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQ 361
Query: 378 -----RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQT 437
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N E++L +Q+ EK++LRTQT
Sbjct: 362 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQT 421
Query: 438 LLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAF 497
LLCDML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG TP+E ++++ WL +
Sbjct: 422 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 481
Query: 498 HGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHH 557
H DSTGLSTDSL DAG+P A LG +VCGM I+ +D +FWFRSHT E++WGGAKH
Sbjct: 482 HMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 541
Query: 558 PADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAA--INSK 617
P D+DD +RMHPRSSFKAFLEVVK+RSLPW+ EMDAIHSLQLILR++FKD+ +N+K
Sbjct: 542 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTK 601
Query: 618 AVVHPQLGDLNLQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELTGLAV 677
V++ +L DL + G +L V EMVRLIETAT PI AVD D +NGWN KIAELTGL+V
Sbjct: 602 -VIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSV 661
Query: 678 EEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVN 737
+EA+GK + LV S EIV +++ AL+G EE+N++ ++KT D PI + VN
Sbjct: 662 DEAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRAD--AGPISLVVN 721
Query: 738 ACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASDDNTC 797
AC+SRD +N+VGVCFV DLT QK MDKF I+ DYKAI+ +PNPLIPPIF +D+
Sbjct: 722 ACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGW 781
Query: 798 CSEWNTAMENLTGWSREDIIGKMLVGEVFG---DCCRLKGSDELTKFMIVLHGAIGGKNN 857
C+EWN AM LTG RE++I KML+GEVFG CCRLK + IVL+ A+ ++
Sbjct: 782 CTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDP 841
Query: 858 EKFPFSFYDKKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNRF 917
EK F+F+ + GK+V+ LL +K+++ EG + G FCF+Q+AS ELQ+ L +QR E+
Sbjct: 842 EKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAV 901
Query: 918 VRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDLE 977
R+K LAYI +++++PLSGI FT ++E T+L +Q++ L+TS C+KQ+ KI++D DLE
Sbjct: 902 KRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLE 961
Query: 978 SIDDGTMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQ 1037
SI +G +++E EF L V+ A SQ M+ +++++ + EEV + +YGD +R+QQ
Sbjct: 962 SIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQ 1021
Query: 1038 VLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDMF 1097
VLADF+L V + PS G + + Q + LA+ E R+ G G+P L+ MF
Sbjct: 1022 VLADFMLMAVNFTPS-GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMF 1081
Query: 1098 HSGGWATQEGLGLSMCRKILKLMKGEVQYIRESERCYFLITLEL 1124
+ ++EGL L + RK++KLM G+VQY+R++ + F+IT EL
Sbjct: 1082 GTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
BLAST of CmaCh06G015640 vs. TAIR 10
Match:
AT5G35840.1 (phytochrome C )
HSP 1 Score: 1134.0 bits (2932), Expect = 0.0e+00
Identity = 578/1120 (51.61%), Postives = 792/1120 (70.71%), Query Frame = 0
Query: 21 NTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIR-----TSTSVP 80
++NTS S R+ S+ +Q +DA+LH FE ES + FDYS SI +S +P
Sbjct: 2 SSNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIP 61
Query: 81 EQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNLEKIEIL 140
++ YL IQRG IQPFGC+I +DE N +VIA+SENT+E+LGL P +VP++E+ E L
Sbjct: 62 SSAVSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREAL 121
Query: 141 TIGTDVRSLFTSNSAILLEKAFGAREITLLNPVWIHSKNSLKPFYAILHRIDVGIVIDLE 200
TIGTDV+SLF S LEKA EI++LNP+ +H ++S KPFYAILHRI+ G+VIDLE
Sbjct: 122 TIGTDVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLE 181
Query: 201 PARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDVVVESVRELTGYDRVMVYK 260
P ++ ++ AGA++S KLA ++IS+LQALP G++ LLCD +V+ V ELTGYDRVMVYK
Sbjct: 182 PVSPDEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYK 241
Query: 261 FHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQA 320
FHED HGEV+AE R D+EPY+GLHY +TDIPQASRFLF +N+VRMI DC A PV+V+Q
Sbjct: 242 FHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQD 301
Query: 321 AGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINSNDDEAIGG--RNSTRLWG 380
L QP+ L GSTLRAPHGCH+QYM+NMGS++SL M+V IN +D + + + LWG
Sbjct: 302 KSLSQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWG 361
Query: 381 LVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 440
LVVCHH S R +PFPLRYACEFL Q FG+Q+N E + A L EK +L+TQ++LCDML R+
Sbjct: 362 LVVCHHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRN 421
Query: 441 SPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGDSTGLST 500
+P GI+TQSP+IMDLVKCDGAALYY+ + LGVTPTE QI+D+++W+L HG +TG +T
Sbjct: 422 APIGIVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTT 481
Query: 501 DSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPADKDDGQR 560
+SL ++GYP A++LG ++CGM YI+++DFLFWFRS T K+IKWGGA+H P D+ DG+R
Sbjct: 482 ESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKR 541
Query: 561 MHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKAVVHPQLGDLN 620
MHPRSSFKAF+E+V+ +S+PW+ EMDAI+SLQLI++ S ++ +SK VV L D
Sbjct: 542 MHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEE---HSKTVVDVPLVDNR 601
Query: 621 LQGTDDLSLVAREMVRLIETATAPIFAVDVDSRINGWNAKIAELTGLAVEEAMGKSLVRD 680
+Q D+L ++ EMVRLI+TA PIFAVD INGWN+K AE+TGLAVE+A+GK V D
Sbjct: 602 VQKVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSD 661
Query: 681 LVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSRDYTDNI 740
LV +S E V +++ AL+G EE+ EI+++ FG P + P+ + VN C SRD T+N+
Sbjct: 662 LVEDDSVETVKNMLALALEGSEERGAEIRIRAFG--PKRKSSPVELVVNTCCSRDMTNNV 721
Query: 741 VGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPNPLIPPIFASDDNTCCSEWNTAMENL 800
+GVCF+GQD+T QK + + ++ DY I+ SP+ LIPPIF +++N CSEWN AM+ L
Sbjct: 722 LGVCFIGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKL 781
Query: 801 TGWSREDIIGKMLVGEVFG----DCCRLKGSDELTKFMIVLHGAIGG-KNNEKFPFSFYD 860
+G RE+++ K+L+GEVF CC LK D LTK I + I G KN EK F FY
Sbjct: 782 SGIKREEVVNKILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYH 841
Query: 861 KKGKFVQALLTANKRMNMEGQIVGAFCFVQIASLELQRTLRMQRQQEKNRFVRMKELAYI 920
+ G F++ALL+ANKR ++EG++ G CF+Q+ S ELQ L++Q+ E + +LAY+
Sbjct: 842 RDGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYL 901
Query: 921 CQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQMLKIIEDMDLESIDDGTMEI 980
EVK P I F LL ++ LSEDQK+ L TSV C +Q+ K+I D D+E I++G +E+
Sbjct: 902 RHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVEL 961
Query: 981 EKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLNM 1040
+ EF L + AVV Q M L ER +Q+ D P+EV +M +YGD +R+QQ+L++ LL+
Sbjct: 962 DCSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSS 1021
Query: 1041 VRYAPSPEG-WVELRVCPFLKQNSDRLCLAHTEFRIVCPGEGLPPELIQDMFHSGGWAT- 1100
+R+ P+ G V +V ++ R+ EFRI+ P GLP +L+++MF T
Sbjct: 1022 IRFTPALRGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTS 1081
Query: 1101 QEGLGLSMCRKILKLM-KGEVQYIRESERCYFLITLELPL 1126
+EGLGL + +K++KLM +G ++Y+RESE F+I E PL
Sbjct: 1082 REGLGLHITQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P29130 | 0.0e+00 | 80.44 | Phytochrome B OS=Nicotiana tabacum OX=4097 GN=PHYB PE=2 SV=2 | [more] |
P34094 | 0.0e+00 | 79.12 | Phytochrome B OS=Solanum tuberosum OX=4113 GN=PHYB PE=3 SV=2 | [more] |
I1MGE5 | 0.0e+00 | 79.59 | Phytochrome B-2 OS=Glycine max OX=3847 GN=GLYMA_15G140000 PE=1 SV=2 | [more] |
Q9ZS62 | 0.0e+00 | 78.24 | Phytochrome B1 OS=Solanum lycopersicum OX=4081 GN=PHYB1 PE=2 SV=1 | [more] |
P14713 | 0.0e+00 | 75.75 | Phytochrome B OS=Arabidopsis thaliana OX=3702 GN=PHYB PE=1 SV=1 | [more] |