CmaCh06G015070 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G015070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103483850
Location	Cma_Chr06: 9555247 .. 9555603 (-)
RNA-Seq Expression	CmaCh06G015070
Synteny	CmaCh06G015070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTGGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGAAGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCGGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTCGGTGGCGATGATGATTCCAGCGATTGA

mRNA sequence

ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTGGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGAAGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCGGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTCGGTGGCGATGATGATTCCAGCGATTGA

Coding sequence (CDS)

ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTGGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGAAGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCGGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTCGGTGGCGATGATGATTCCAGCGATTGA

Protein sequence

MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD

Homology

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BLAST of CmaCh06G015070 vs. ExPASy TrEMBL
Match: A0A6J1IFG7 (uncharacterized protein LOC111472296 OS=Cucurbita maxima OX=3661 GN=LOC111472296 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60
           MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ
Sbjct: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60

Query: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD
Sbjct: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 118

[Close]

BLAST of CmaCh06G015070 vs. ExPASy TrEMBL
Match: A0A6J1I8A7 (uncharacterized protein LOC111472294 OS=Cucurbita maxima OX=3661 GN=LOC111472294 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.2e-54
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60
           MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ
Sbjct: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60

Query: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 118

[Close]

BLAST of CmaCh06G015070 vs. ExPASy TrEMBL
Match: A0A6J1FCS5 (uncharacterized protein LOC111444213 OS=Cucurbita moschata OX=3662 GN=LOC111444213 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.2e-54
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60
           MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ
Sbjct: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60

Query: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 118

[Close]

BLAST of CmaCh06G015070 vs. ExPASy TrEMBL
Match: A0A5A7U157 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001100 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAI 60
           MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALT+AISDLLSPFGLLLLPILLLL I
Sbjct: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119

[Close]

BLAST of CmaCh06G015070 vs. ExPASy TrEMBL
Match: A0A0A0L5U0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154405 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAI 60
           MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALT+AISDLLSPFGLLLLPILLLL I
Sbjct: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119

[Close]

BLAST of CmaCh06G015070 vs. NCBI nr
Match: XP_022973719.1 (uncharacterized protein LOC111472296 [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60
           MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ
Sbjct: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60

Query: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD
Sbjct: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 118

[Close]

BLAST of CmaCh06G015070 vs. NCBI nr
Match: XP_022937994.1 (uncharacterized protein LOC111444213 [Cucurbita moschata] >XP_022973717.1 uncharacterized protein LOC111472294 [Cucurbita maxima] >XP_023522113.1 uncharacterized protein LOC111785989 [Cucurbita pepo subsp. pepo] >XP_023539949.1 uncharacterized protein LOC111800474 [Cucurbita pepo subsp. pepo] >KAG6597528.1 hypothetical protein SDJN03_10708, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028985.1 hypothetical protein SDJN02_10168, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.3 bits (560), Expect = 8.7e-54
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60
           MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ
Sbjct: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQ 60

Query: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  FLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 118

[Close]

BLAST of CmaCh06G015070 vs. NCBI nr
Match: XP_004134216.1 (uncharacterized protein LOC101205160 [Cucumis sativus] >XP_008438893.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103483850 [Cucumis melo] >KAA0049502.1 hypothetical protein E6C27_scaffold171G007560 [Cucumis melo var. makuwa] >TYK16182.1 hypothetical protein E5676_scaffold209G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAI 60
           MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALT+AISDLLSPFGLLLLPILLLL I
Sbjct: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTDAISDLLSPFGLLLLPILLLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119

[Close]

BLAST of CmaCh06G015070 vs. NCBI nr
Match: XP_038899735.1 (uncharacterized protein LOC120086972 [Benincasa hispida])

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-49
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAI 60
           MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALTEAISDLLSP GLLLLPILLLL I
Sbjct: 1   MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPLGLLLLPILLLLTI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDS D
Sbjct: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD 119

[Close]

BLAST of CmaCh06G015070 vs. NCBI nr
Match: XP_022137815.1 (uncharacterized protein LOC111009160 [Momordica charantia])

HSP 1 Score: 204.1 bits (518), Expect = 6.5e-49
Identity = 107/119 (89.92%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAI 60
           MIEERQGGAPHG+LLAVVVA+VIV PF+ GD GEA+TEAISDLLSPFGLLLLP++LLLAI
Sbjct: 1   MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAI 60

Query: 61  QFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           QFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LILFLLYNRISIFGGDDDS D
Sbjct: 61  QFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYNRISIFGGDDDSGD 119

[Close]

BLAST of CmaCh06G015070 vs. TAIR 10
Match: AT3G06890.1 (unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-42
Identity = 88/113 (77.88%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 7   GGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSD 66
           G APHG++LAVVVA+V++ PF +GD GEA+T+AI++LLSP GLLLLPI+LLL IQFLSS+
Sbjct: 16  GSAPHGIILAVVVALVVLVPFFIGDSGEAITDAIAELLSPVGLLLLPIILLLTIQFLSSE 75

Query: 67  RGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSSD 119
           RGSFVSAIFS+GEP+SIHRV+GSPVGVALFLVLILFLLY R SIFGGDD S D
Sbjct: 76  RGSFVSAIFSTGEPESIHRVSGSPVGVALFLVLILFLLYYRFSIFGGDDGSDD 128

[Close]

BLAST of CmaCh06G015070 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 1   MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLS---PFGLLLLPILLLL 60
           M  +++G  P  + L V V I+++  F+     A  E + +  +      L+  P+LLLL
Sbjct: 1   MGRDQEGSPPVPLHLCVFVLILLM--FVTISWYASYEPVIEGFTYQFKLALMASPLLLLL 60

Query: 61  AIQFLSSDR--GSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLL 104
           A+ FLS D+  G  ++++    E +S++R  G+P GVA  LV + F++
Sbjct: 61  AVHFLSDDQGVGGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMV 106

The following BLAST results are available for this feature:

BLAST of CmaCh06G015070 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G015070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFG7	1.5e-54	100.00	uncharacterized protein LOC111472296 OS=Cucurbita maxima OX=3661 GN=LOC111472296...	[more]
A0A6J1I8A7	4.2e-54	99.15	uncharacterized protein LOC111472294 OS=Cucurbita maxima OX=3661 GN=LOC111472294...	[more]
A0A6J1FCS5	4.2e-54	99.15	uncharacterized protein LOC111444213 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A5A7U157	4.8e-50	94.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L5U0	4.8e-50	94.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154405 PE=4 SV=1	[more]

BLAST of CmaCh06G015070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973719.1	3.0e-54	100.00	uncharacterized protein LOC111472296 [Cucurbita maxima]	[more]
XP_022937994.1	8.7e-54	99.15	uncharacterized protein LOC111444213 [Cucurbita moschata] >XP_022973717.1 unchar...	[more]
XP_004134216.1	1.0e-49	94.12	uncharacterized protein LOC101205160 [Cucumis sativus] >XP_008438893.1 PREDICTED...	[more]
XP_038899735.1	2.2e-49	94.12	uncharacterized protein LOC120086972 [Benincasa hispida]	[more]
XP_022137815.1	6.5e-49	89.92	uncharacterized protein LOC111009160 [Momordica charantia]	[more]

BLAST of CmaCh06G015070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06890.1	2.1e-42	77.88	unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bac...	[more]
AT2G31940.1	1.8e-04	30.56	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 4..117
None	No IPR available	PANTHER	PTHR33306:SF1	EXPRESSED PROTEIN	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015070.1	CmaCh06G015070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane