CmaCh06G013850 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G013850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein NETWORKED 1A-like
Location	Cma_Chr06: 8997432 .. 8997680 (-)
RNA-Seq Expression	CmaCh06G013850
Synteny	CmaCh06G013850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGACGAGCAGTCGCGATTCGTACAAGTTGAAAACACTCTCCACACTCTGCAGAATTTGCATTGTCAATCTCAGGAGGAGCAGAGAGCTCTGACCTTGGAGCTAAAAAATGGTCTCATGATGTTGAAGGATTTGGATATAGGAGGAGCAGAGAGCTCTGACCTTGGAGCTAAAAAATGGTCTCATGATGTTGAAGGATTTGGATATATGCAAACATGGTATGGAGGAAGAGCTTCAACGAGTTAA

mRNA sequence

ATGAACGACGAGCAGTCGCGATTCGTACAAGTTGAAAACACTCTCCACACTCTGCAGAATTTGCATTGTCAATCTCAGGAGGAGCAGAGAGCTCTGACCTTGGAGCTAAAAAATGGTCTCATGATGTTGAAGGATTTGGATATAGGAGGAGCAGAGAGCTCTGACCTTGGAGCTAAAAAATGGTCTCATGATGTTGAAGGATTTGGATATATGCAAACATGGTATGGAGGAAGAGCTTCAACGAGTTAA

Coding sequence (CDS)

ATGAACGACGAGCAGTCGCGATTCGTACAAGTTGAAAACACTCTCCACACTCTGCAGAATTTGCATTGTCAATCTCAGGAGGAGCAGAGAGCTCTGACCTTGGAGCTAAAAAATGGTCTCATGATGTTGAAGGATTTGGATATAGGAGGAGCAGAGAGCTCTGACCTTGGAGCTAAAAAATGGTCTCATGATGTTGAAGGATTTGGATATATGCAAACATGGTATGGAGGAAGAGCTTCAACGAGTTAA

Protein sequence

MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDIGGAESSDLGAKKWSHDVEGFGYMQTWYGGRASTS

Homology

[Close]

BLAST of CmaCh06G013850 vs. ExPASy Swiss-Prot
Match: Q9LUI2 (Protein NETWORKED 1A OS=Arabidopsis thaliana OX=3702 GN=NET1A PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.4e-05
Identity = 23/47 (48.94%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLD 48
           + DE SR++++E +L TLQ+L+ QSQEEQ+ +T EL++ + ML+DL+
Sbjct: 435 IEDEHSRYLEIEVSLKTLQSLYSQSQEEQKVITSELQSRIGMLRDLE 481

[Close]

BLAST of CmaCh06G013850 vs. ExPASy Swiss-Prot
Match: F4JIF4 (Protein NETWORKED 1B OS=Arabidopsis thaliana OX=3702 GN=NET1B PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04
Identity = 24/61 (39.34%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDIGGAE-SSDLGAK 60
           M +EQ RF ++  +L  L++LH QSQEEQ+ LT EL + + ML++L++  ++   D+ +K
Sbjct: 434 MQEEQLRFSELGASLRNLESLHSQSQEEQKVLTSELHSRIQMLRELEMRNSKLEGDISSK 493

[Close]

BLAST of CmaCh06G013850 vs. ExPASy Swiss-Prot
Match: F4HZB5 (Protein NETWORKED 1D OS=Arabidopsis thaliana OX=3702 GN=NET1D PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.0e-04
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLD 48
           + +E  RF++ E    TLQ LH QSQEE   L LEL+N   +LKD++
Sbjct: 488 VQEENLRFMEAETAFQTLQQLHSQSQEELSTLALELQNRSQILKDME 534

[Close]

BLAST of CmaCh06G013850 vs. ExPASy TrEMBL
Match: A0A6J1IJJ1 (protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111474107 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 500 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 547

[Close]

BLAST of CmaCh06G013850 vs. ExPASy TrEMBL
Match: A0A6J1G9C5 (protein NETWORKED 1A OS=Cucurbita moschata OX=3662 GN=LOC111451895 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 501 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 548

[Close]

BLAST of CmaCh06G013850 vs. ExPASy TrEMBL
Match: A0A6J1IDX1 (protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111473090 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 500 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 547

[Close]

BLAST of CmaCh06G013850 vs. ExPASy TrEMBL
Match: A0A5A7U275 (Protein NETWORKED 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005800 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MN+EQSRFVQVENTLHTLQ LHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 557 MNEEQSRFVQVENTLHTLQKLHCQSQEEQRALTLELKNGLMMLKDLDI 604

[Close]

BLAST of CmaCh06G013850 vs. ExPASy TrEMBL
Match: A0A5D3D0S3 (Protein NETWORKED 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00710 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MN+EQSRFVQVENTLHTLQ LHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 481 MNEEQSRFVQVENTLHTLQKLHCQSQEEQRALTLELKNGLMMLKDLDI 528

[Close]

BLAST of CmaCh06G013850 vs. NCBI nr
Match: XP_022948248.1 (protein NETWORKED 1A [Cucurbita moschata] >XP_022948249.1 protein NETWORKED 1A [Cucurbita moschata] >XP_022948250.1 protein NETWORKED 1A [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 501 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 548

[Close]

BLAST of CmaCh06G013850 vs. NCBI nr
Match: KAG6597427.1 (Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 442 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 489

[Close]

BLAST of CmaCh06G013850 vs. NCBI nr
Match: XP_022974420.1 (protein NETWORKED 1A-like [Cucurbita maxima])

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 500 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 547

[Close]

BLAST of CmaCh06G013850 vs. NCBI nr
Match: KAG7028885.1 (Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 501 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 548

[Close]

BLAST of CmaCh06G013850 vs. NCBI nr
Match: XP_023539942.1 (protein NETWORKED 1A [Cucurbita pepo subsp. pepo] >XP_023539943.1 protein NETWORKED 1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 49
           MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI
Sbjct: 501 MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDI 548

[Close]

BLAST of CmaCh06G013850 vs. TAIR 10
Match: AT3G22790.1 (Kinase interacting (KIP1-like) family protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 23/47 (48.94%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLD 48
           + DE SR++++E +L TLQ+L+ QSQEEQ+ +T EL++ + ML+DL+
Sbjct: 435 IEDEHSRYLEIEVSLKTLQSLYSQSQEEQKVITSELQSRIGMLRDLE 481

[Close]

BLAST of CmaCh06G013850 vs. TAIR 10
Match: AT4G14760.1 (kinase interacting (KIP1-like) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05
Identity = 24/61 (39.34%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLDIGGAE-SSDLGAK 60
           M +EQ RF ++  +L  L++LH QSQEEQ+ LT EL + + ML++L++  ++   D+ +K
Sbjct: 434 MQEEQLRFSELGASLRNLESLHSQSQEEQKVLTSELHSRIQMLRELEMRNSKLEGDISSK 493

[Close]

BLAST of CmaCh06G013850 vs. TAIR 10
Match: AT1G03080.1 (kinase interacting (KIP1-like) family protein )

HSP 1 Score: 44.7 bits (104), Expect = 4.2e-05
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 1   MNDEQSRFVQVENTLHTLQNLHCQSQEEQRALTLELKNGLMMLKDLD 48
           + +E  RF++ E    TLQ LH QSQEE   L LEL+N   +LKD++
Sbjct: 488 VQEENLRFMEAETAFQTLQQLHSQSQEELSTLALELQNRSQILKDME 534

The following BLAST results are available for this feature:

BLAST of CmaCh06G013850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUI2	2.4e-05	48.94	Protein NETWORKED 1A OS=Arabidopsis thaliana OX=3702 GN=NET1A PE=1 SV=1	[more]
F4JIF4	1.6e-04	39.34	Protein NETWORKED 1B OS=Arabidopsis thaliana OX=3702 GN=NET1B PE=2 SV=1	[more]
F4HZB5	6.0e-04	46.81	Protein NETWORKED 1D OS=Arabidopsis thaliana OX=3702 GN=NET1D PE=3 SV=1	[more]

BLAST of CmaCh06G013850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJJ1	8.3e-17	100.00	protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111474107 PE=4 SV=1	[more]
A0A6J1G9C5	8.3e-17	100.00	protein NETWORKED 1A OS=Cucurbita moschata OX=3662 GN=LOC111451895 PE=4 SV=1	[more]
A0A6J1IDX1	8.3e-17	100.00	protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111473090 PE=4 SV=1	[more]
A0A5A7U275	1.2e-15	95.83	Protein NETWORKED 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171...	[more]
A0A5D3D0S3	1.2e-15	95.83	Protein NETWORKED 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434...	[more]

BLAST of CmaCh06G013850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948248.1	1.7e-16	100.00	protein NETWORKED 1A [Cucurbita moschata] >XP_022948249.1 protein NETWORKED 1A [...	[more]
KAG6597427.1	1.7e-16	100.00	Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022974420.1	1.7e-16	100.00	protein NETWORKED 1A-like [Cucurbita maxima]	[more]
KAG7028885.1	1.7e-16	100.00	Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023539942.1	1.7e-16	100.00	protein NETWORKED 1A [Cucurbita pepo subsp. pepo] >XP_023539943.1 protein NETWOR...	[more]

BLAST of CmaCh06G013850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22790.1	1.7e-06	48.94	Kinase interacting (KIP1-like) family protein	[more]
AT4G14760.1	1.1e-05	39.34	kinase interacting (KIP1-like) family protein	[more]
AT1G03080.1	4.2e-05	46.81	kinase interacting (KIP1-like) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32258	PROTEIN NETWORKED 4A	coord: 1..49
None	No IPR available	PANTHER	PTHR32258:SF6	PROTEIN NETWORKED 1D ISOFORM X1	coord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G013850.1	CmaCh06G013850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding