CmaCh06G013320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G013320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-H2 finger protein ATL16-like
Location	Cma_Chr06: 8762619 .. 8763590 (+)
RNA-Seq Expression	CmaCh06G013320
Synteny	CmaCh06G013320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCTTCCCCCAAATCAAATCTTCTCAATACCTTCCTCCATTTCCGCCGCCAAATCCTTCCCATTCTGACTCCACCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATTCTCGCCACCGCCTTCTTGCTCCTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTTCTCCGTCGTCTCTCCCTCTCCTCGAGGCGGCGGCGTCCAGCCCCCAACACTCATTCTCCGCCCATTGACACCAGGGGTCTCGACGAATCGGTCATTAGATCAATCCCTTTAGTTCAATACAAGAATTCAATAGCCAGAGGAAAAACCTCGTCGGAATGCTCTGTTTGTTTGAGTGAATTTGGAGAGGATGAAACGGTGAGAATTATTCCCATTTGTTCACATCTTTTTCACATTGACTGCATCGATATTTGGCTGCAAAATAATCCCAATTGCCCGTTATGTCGAACCACCATTTCGAGCTCTGCTCTGTTTCATCGATTTCCTCTGCCAACCTCCTCGCCGGCGGAACCAATCGGCGGTGGAAATGAAAGAGACTTCGTAGTAATTGAATTGGGTGGGATTAGAAACGACCCATCTGGCCAATTGTCACAAGAACGGCCAAATTCAGGGGAATGTCCGGCGACAACCGGAAAATTGGAACAGGGGAAGAAGCGGTGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTGGATTGACACTAGAGAGAAAGACGAGAGGTTTTGTGTTCAGCCCATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGACAGATGTATTTGGCAGTGCAGGCGGCGCTGCGTGGGAGTACGGCGAGCCCCGGCGGCGATGGGTGTAATGGAAGAGGGAGGAGGTCTCTGTTTTCGTTTGGGAATGGGATGAGTTGCAGAAATGGCGTTGAAGTTCAGGCGGTGCGGTTGGAAGAGAGTTAG

mRNA sequence

ATGGAGTTCTTCCCCCAAATCAAATCTTCTCAATACCTTCCTCCATTTCCGCCGCCAAATCCTTCCCATTCTGACTCCACCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATTCTCGCCACCGCCTTCTTGCTCCTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTTCTCCGTCGTCTCTCCCTCTCCTCGAGGCGGCGGCGTCCAGCCCCCAACACTCATTCTCCGCCCATTGACACCAGGGGTCTCGACGAATCGGTCATTAGATCAATCCCTTTAGTTCAATACAAGAATTCAATAGCCAGAGGAAAAACCTCGTCGGAATGCTCTGTTTGTTTGAGTGAATTTGGAGAGGATGAAACGGTGAGAATTATTCCCATTTGTTCACATCTTTTTCACATTGACTGCATCGATATTTGGCTGCAAAATAATCCCAATTGCCCGTTATGTCGAACCACCATTTCGAGCTCTGCTCTGTTTCATCGATTTCCTCTGCCAACCTCCTCGCCGGCGGAACCAATCGGCGGTGGAAATGAAAGAGACTTCGTAGTAATTGAATTGGGTGGGATTAGAAACGACCCATCTGGCCAATTGTCACAAGAACGGCCAAATTCAGGGGAATGTCCGGCGACAACCGGAAAATTGGAACAGGGGAAGAAGCGGTGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTGGATTGACACTAGAGAGAAAGACGAGAGGTTTTGTGTTCAGCCCATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGACAGATGTATTTGGCAGTGCAGGCGGCGCTGCGTGGGAGTACGGCGAGCCCCGGCGGCGATGGGTGTAATGGAAGAGGGAGGAGGTCTCTGTTTTCGTTTGGGAATGGGATGAGTTGCAGAAATGGCGTTGAAGTTCAGGCGGTGCGGTTGGAAGAGAGTTAG

Coding sequence (CDS)

ATGGAGTTCTTCCCCCAAATCAAATCTTCTCAATACCTTCCTCCATTTCCGCCGCCAAATCCTTCCCATTCTGACTCCACCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATTCTCGCCACCGCCTTCTTGCTCCTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTTCTCCGTCGTCTCTCCCTCTCCTCGAGGCGGCGGCGTCCAGCCCCCAACACTCATTCTCCGCCCATTGACACCAGGGGTCTCGACGAATCGGTCATTAGATCAATCCCTTTAGTTCAATACAAGAATTCAATAGCCAGAGGAAAAACCTCGTCGGAATGCTCTGTTTGTTTGAGTGAATTTGGAGAGGATGAAACGGTGAGAATTATTCCCATTTGTTCACATCTTTTTCACATTGACTGCATCGATATTTGGCTGCAAAATAATCCCAATTGCCCGTTATGTCGAACCACCATTTCGAGCTCTGCTCTGTTTCATCGATTTCCTCTGCCAACCTCCTCGCCGGCGGAACCAATCGGCGGTGGAAATGAAAGAGACTTCGTAGTAATTGAATTGGGTGGGATTAGAAACGACCCATCTGGCCAATTGTCACAAGAACGGCCAAATTCAGGGGAATGTCCGGCGACAACCGGAAAATTGGAACAGGGGAAGAAGCGGTGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTGGATTGACACTAGAGAGAAAGACGAGAGGTTTTGTGTTCAGCCCATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGACAGATGTATTTGGCAGTGCAGGCGGCGCTGCGTGGGAGTACGGCGAGCCCCGGCGGCGATGGGTGTAATGGAAGAGGGAGGAGGTCTCTGTTTTCGTTTGGGAATGGGATGAGTTGCAGAAATGGCGTTGAAGTTCAGGCGGTGCGGTTGGAAGAGAGTTAG

Protein sequence

MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPAEPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLGDEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSLFSFGNGMSCRNGVEVQAVRLEES

Homology

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BLAST of CmaCh06G013320 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 9.7e-74
Identity = 174/356 (48.88%), Postives = 222/356 (62.36%), Query Frame = 0


Query: 7   IKSSQYLPPFPPP--NPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRID 66
           ++   + PP PPP  + + S  TSFPI+A+A+IGILATAFLL+SYYVFVI CCLNWHRID
Sbjct: 10  LRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRID 69

Query: 67  LLRRLSLSSRRRRPAP--NTHSPPIDTRGLDESVIRSIPLVQYKNSIARG---------- 126
           +L R SLS RRR        +SP + +RGLDESVIR+IP+ ++K    +           
Sbjct: 70  ILGRFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEE 129

Query: 127 ---KTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALF 186
              K S ECSVCLSEF ++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

Query: 187 --HRFPLPTSSPAEPIGGGNERDFVVIELGGI----RNDP-SGQL--SQERPNSG----- 246
              R   P++SP   +    E ++VVIELG      R+ P  G+L   QER NSG     
Sbjct: 190 PPDRVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNE 249

Query: 247 ----ECPATTGKLEQG---KKRWKLQKVTSLGDEWIDTRE-KDERF-CVQPIRRSVSMDS 306
                   +  KL++G   +K  KL K+TS+GDE ID R  KDE+F  +QPIRRS+SMDS
Sbjct: 250 NTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDS 309

Query: 307 SAERQMYLAVQAALR-----------GSTASPGGDGCNGRGRRSLFSFGNGMSCRN 312
           SA+RQ+YLAVQ A+R           G  +S  G+  N + +RS FSFG+    R+
Sbjct: 310 SADRQLYLAVQEAIRKNREVLVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRRSRS 365

[Close]

BLAST of CmaCh06G013320 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-62
Identity = 160/360 (44.44%), Postives = 198/360 (55.00%), Query Frame = 0


Query: 14  PPFPPPNP---------SHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRID 73
           PP PPP+          + S  T+FPI+AIA+IGILATAFLL+SYY+FVI CCLNWH+ID
Sbjct: 17  PPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQID 76

Query: 74  LLRRLSLSSRRRRPAPN---THSPPIDTRGLDESVIRSIPLVQYKNSIA------RGKTS 133
           + RR     RRR    N    +SP    RGLDES IR+IP+ ++K          + K S
Sbjct: 77  IFRR-----RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS 136

Query: 134 SECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALF------ 193
            ECSVCL+EF EDE +RIIP C H+FHIDCIDIWLQ N NCPLCRT++S  A F      
Sbjct: 137 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLIS 196

Query: 194 ------HRFPLPTSSPAEP-IGGGNERDFVVIELGGIRNDPSGQL-------SQERPNSG 253
                    P   +   EP +  G + DFVVIELG    +    +        QER  S 
Sbjct: 197 APSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSN 256

Query: 254 E------------CPATTGKLEQGKKRWKLQKVTSLGDEWIDTREKDERFC-VQPIRRSV 312
           E             P   G     KK  K  KVTS+GDE IDTR KD  F  +QPIRRS+
Sbjct: 257 EVSTGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSI 316

[Close]

BLAST of CmaCh06G013320 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.9e-27
Identity = 93/299 (31.10%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 16  FPPPNP-------SHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRR 75
           FPPP P       S S S+SF  + IA+IGIL +A +L+SYY  +   C   H+      
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSET 93

Query: 76  LSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGED 135
           L+L+        +T     +  GL+ES+I+SI + +YK+        S+CSVCLSEF E+
Sbjct: 94  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDG-FVDGSDCSVCLSEFEEN 153

Query: 136 ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPAEPIGGGNE 195
           E++R++P C+H FH+ CID WL+++ NCPLCR  ++            ++P   +G   +
Sbjct: 154 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG----------VNNPTASVG---Q 213

Query: 196 RDFVVIELGGIRNDPSGQLSQERPNSGECPATTG---------KLEQGKKRWKLQKVTSL 255
              VV+         +G +S+   N     + TG          LE G +    +    L
Sbjct: 214 NVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQL 273

Query: 256 GDEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRR 299
            +E  +T+++D      PIRRSVS++S     + +++   LR      G  G  G  +R
Sbjct: 274 PEERRETKDEDS----LPIRRSVSLNSG----VVVSIADVLREIEDEEGESGGVGTSQR 310

[Close]

BLAST of CmaCh06G013320 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-23
Identity = 95/322 (29.50%), Postives = 149/322 (46.27%), Query Frame = 0


Query: 16  FPPPNP-----SHSDSTSFPI---IAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLR 75
           FPPP P     + +D +S P+   + IAIIG+LA+AFLL+SYY F+   C     +  LR
Sbjct: 34  FPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYC---GTVSSLR 93

Query: 76  RLSLSS---------------RRRRPAPNTH-----SPPIDTRGLDESVIRSIPLVQYKN 135
                S               R       +H     SPP    GLDE++I  I + +Y+ 
Sbjct: 94  GRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPP---SGLDETLINKITVCKYRR 153

Query: 136 SIARGKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSA 195
                 T ++CSVCL EF + E++R++P CSH FH  CID WL+++ NCPLCR  I+   
Sbjct: 154 GDGFVHT-TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVT 213

Query: 196 LFHRFPLPTSSPAEPIGGGNERDFVVIELGGIRN-DPSGQLSQERPNSGECPATTGKLEQ 255
           +    P P        GG N  + VV+ + G+ N     Q +  R ++ +       + +
Sbjct: 214 VGLASPEPEGCAPGETGGDNTHEVVVV-MDGLENLCEEQQEAVSRASTADDDHDAKDVAE 273

Query: 256 GKKRWKLQKVTSLGDEWIDTR--------EKDERFCVQPI-RRSVSMDSSAERQMYLAVQ 300
           G +  +      + +E    +         +D R C+  + + S+  + +A R+  L   
Sbjct: 274 GME--EANGAAEIREEGSPPKRGASSFDLHRDNRMCIADVLQESMEDELTAARESGLLAG 333

[Close]

BLAST of CmaCh06G013320 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 6.6e-22
Identity = 66/176 (37.50%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 16  FPPP------NPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHR------- 75
           FPPP      +   S S+ F  + IA+IGILA+AF+L+SYY  +   C   HR       
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSS 96

Query: 76  --IDLLRRLSLSSRRRRPAPNTHSPPIDTR---------GLDESVIRSIPLVQYKNSIAR 135
                + R+S     +    N ++   +           GLDES+I+SI + +Y+  +  
Sbjct: 97  TSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYR-KMDG 156

Query: 136 GKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSA 168
              SS+CSVCLSEF E+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S+
Sbjct: 157 FVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 208

[Close]

BLAST of CmaCh06G013320 vs. ExPASy TrEMBL
Match: A0A6J1IJC3 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 3.1e-184
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 324
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of CmaCh06G013320 vs. ExPASy TrEMBL
Match: A0A6J1FW76 (RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.1e-176
Identity = 311/323 (96.28%), Postives = 313/323 (96.90%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           ME FPQ+KSS YLPPFPPP PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRLSLSSRRRRP P THSPPI TRGLDESVIRSIPLVQYKNSIARGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPA  GKLEQGKKR KLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 324
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of CmaCh06G013320 vs. ExPASy TrEMBL
Match: A0A5D3D010 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001510 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.7e-143
Identity = 264/327 (80.73%), Postives = 284/327 (86.85%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPNPSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HR DL+RRLS SS RR P+P  +SP  +TRGLDESVIRSIPL+ YK S+   KT SEC+V
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP+SSP 
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK  KLQKVTSLG
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300
           DEWIDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 324
           RRSLFSFGNG SCR+ V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of CmaCh06G013320 vs. ExPASy TrEMBL
Match: A0A1S3AWQ9 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.7e-143
Identity = 264/327 (80.73%), Postives = 284/327 (86.85%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPNPSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HR DL+RRLS SS RR P+P  +SP  +TRGLDESVIRSIPL+ YK S+   KT SEC+V
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP+SSP 
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK  KLQKVTSLG
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300
           DEWIDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 324
           RRSLFSFGNG SCR+ V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of CmaCh06G013320 vs. ExPASy TrEMBL
Match: A0A0A0L8B0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.3e-139
Identity = 257/327 (78.59%), Postives = 279/327 (85.32%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF +IK+SQ++PPFPPPNPSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HR DL+RRLS SS R  P+P  +SP + TRGLDESVIRSIPL+ Y  S+   KTSSEC+V
Sbjct: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF E ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFH FPLP+SSP 
Sbjct: 121 CLSEFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPE 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PI    ERDF+VIELGGIRN PSGQ SQER NS E PA   KLEQGKK  KLQKVTSLG
Sbjct: 181 DPIAAATERDFLVIELGGIRNHPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALR----GSTASPGGDGCNGRG 300
           DEWIDTREKDE+FC+QPIRRSVSMDSSAERQMY+AVQAAL+    G+  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 324
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 322

[Close]

BLAST of CmaCh06G013320 vs. NCBI nr
Match: XP_022975064.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 654.1 bits (1686), Expect = 6.5e-184
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 324
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of CmaCh06G013320 vs. NCBI nr
Match: KAG7028833.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 311/323 (96.28%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           ME FPQ+KSS YLPPFPPP PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MELFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRLSLSSRRRRP P THSPPI TRGLDESVIRSIPLVQYKNSI RGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKR KLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGC+GRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCHGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 324
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of CmaCh06G013320 vs. NCBI nr
Match: XP_022942390.1 (RING-H2 finger protein ATL16 [Cucurbita moschata])

HSP 1 Score: 625.9 bits (1613), Expect = 1.9e-175
Identity = 311/323 (96.28%), Postives = 313/323 (96.90%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           ME FPQ+KSS YLPPFPPP PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRLSLSSRRRRP P THSPPI TRGLDESVIRSIPLVQYKNSIARGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPA  GKLEQGKKR KLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 324
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of CmaCh06G013320 vs. NCBI nr
Match: XP_023540628.1 (RING-H2 finger protein ATL16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.4 bits (1596), Expect = 1.8e-173
Identity = 310/323 (95.98%), Postives = 312/323 (96.59%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           MEFFPQ+KSS YLPPFPPP PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRL LSSRRRRP P T SPPI TRGLDESVIRSIPLVQYKNSI RGKTSSECSV
Sbjct: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAT GKLEQGKKR KLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DE IDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 324
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of CmaCh06G013320 vs. NCBI nr
Match: XP_038877360.1 (RING-H2 finger protein ATL16 [Benincasa hispida])

HSP 1 Score: 527.7 bits (1358), Expect = 7.0e-146
Identity = 264/327 (80.73%), Postives = 289/327 (88.38%), Query Frame = 0


Query: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF +I++SQ++PPFPPPN  +   +SFPII IAIIGILATA LLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIRTSQHIPPFPPPNLPNPSHSSFPIIVIAIIGILATALLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120
           HRIDLLRRLS SS RR P+P  +SP I+ RGLD+SVIRSIPL+QYK S+ + KTSSEC+V
Sbjct: 61  HRIDLLRRLSPSSTRRLPSPTAYSPAIENRGLDDSVIRSIPLLQYKKSVPKEKTSSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLP+SSP 
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFHRFPLPSSSPE 180

Query: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240
           +PIGGG ERDFVVIELGG RNDPSGQ SQ+R +SGE PA  GKLEQGKKR KLQKVTSLG
Sbjct: 181 DPIGGGGERDFVVIELGGNRNDPSGQFSQDRASSGELPA--GKLEQGKKRRKLQKVTSLG 240

Query: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300
           DEWIDTR+KDE+FC+QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTRQKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 324
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 325

[Close]

BLAST of CmaCh06G013320 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 6.9e-75
Identity = 174/356 (48.88%), Postives = 222/356 (62.36%), Query Frame = 0


Query: 7   IKSSQYLPPFPPP--NPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRID 66
           ++   + PP PPP  + + S  TSFPI+A+A+IGILATAFLL+SYYVFVI CCLNWHRID
Sbjct: 10  LRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRID 69

Query: 67  LLRRLSLSSRRRRPAP--NTHSPPIDTRGLDESVIRSIPLVQYKNSIARG---------- 126
           +L R SLS RRR        +SP + +RGLDESVIR+IP+ ++K    +           
Sbjct: 70  ILGRFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEE 129

Query: 127 ---KTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALF 186
              K S ECSVCLSEF ++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

Query: 187 --HRFPLPTSSPAEPIGGGNERDFVVIELGGI----RNDP-SGQL--SQERPNSG----- 246
              R   P++SP   +    E ++VVIELG      R+ P  G+L   QER NSG     
Sbjct: 190 PPDRVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNE 249

Query: 247 ----ECPATTGKLEQG---KKRWKLQKVTSLGDEWIDTRE-KDERF-CVQPIRRSVSMDS 306
                   +  KL++G   +K  KL K+TS+GDE ID R  KDE+F  +QPIRRS+SMDS
Sbjct: 250 NTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDS 309

Query: 307 SAERQMYLAVQAALR-----------GSTASPGGDGCNGRGRRSLFSFGNGMSCRN 312
           SA+RQ+YLAVQ A+R           G  +S  G+  N + +RS FSFG+    R+
Sbjct: 310 SADRQLYLAVQEAIRKNREVLVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRRSRS 365

[Close]

BLAST of CmaCh06G013320 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 7.1e-64
Identity = 160/360 (44.44%), Postives = 198/360 (55.00%), Query Frame = 0


Query: 14  PPFPPPNP---------SHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRID 73
           PP PPP+          + S  T+FPI+AIA+IGILATAFLL+SYY+FVI CCLNWH+ID
Sbjct: 17  PPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQID 76

Query: 74  LLRRLSLSSRRRRPAPN---THSPPIDTRGLDESVIRSIPLVQYKNSIA------RGKTS 133
           + RR     RRR    N    +SP    RGLDES IR+IP+ ++K          + K S
Sbjct: 77  IFRR-----RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS 136

Query: 134 SECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALF------ 193
            ECSVCL+EF EDE +RIIP C H+FHIDCIDIWLQ N NCPLCRT++S  A F      
Sbjct: 137 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLIS 196

Query: 194 ------HRFPLPTSSPAEP-IGGGNERDFVVIELGGIRNDPSGQL-------SQERPNSG 253
                    P   +   EP +  G + DFVVIELG    +    +        QER  S 
Sbjct: 197 APSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSN 256

Query: 254 E------------CPATTGKLEQGKKRWKLQKVTSLGDEWIDTREKDERFC-VQPIRRSV 312
           E             P   G     KK  K  KVTS+GDE IDTR KD  F  +QPIRRS+
Sbjct: 257 EVSTGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSI 316

[Close]

BLAST of CmaCh06G013320 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 6.3e-28
Identity = 93/299 (31.10%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 16  FPPPNP-------SHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRR 75
           FPPP P       S S S+SF  + IA+IGIL +A +L+SYY  +   C   H+      
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSET 93

Query: 76  LSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSVCLSEFGED 135
           L+L+        +T     +  GL+ES+I+SI + +YK+        S+CSVCLSEF E+
Sbjct: 94  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDG-FVDGSDCSVCLSEFEEN 153

Query: 136 ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPAEPIGGGNE 195
           E++R++P C+H FH+ CID WL+++ NCPLCR  ++            ++P   +G   +
Sbjct: 154 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG----------VNNPTASVG---Q 213

Query: 196 RDFVVIELGGIRNDPSGQLSQERPNSGECPATTG---------KLEQGKKRWKLQKVTSL 255
              VV+         +G +S+   N     + TG          LE G +    +    L
Sbjct: 214 NVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQL 273

Query: 256 GDEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRR 299
            +E  +T+++D      PIRRSVS++S     + +++   LR      G  G  G  +R
Sbjct: 274 PEERRETKDEDS----LPIRRSVSLNSG----VVVSIADVLREIEDEEGESGGVGTSQR 310

[Close]

BLAST of CmaCh06G013320 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 4.7e-23
Identity = 66/176 (37.50%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 16  FPPP------NPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHR------- 75
           FPPP      +   S S+ F  + IA+IGILA+AF+L+SYY  +   C   HR       
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSS 96

Query: 76  --IDLLRRLSLSSRRRRPAPNTHSPPIDTR---------GLDESVIRSIPLVQYKNSIAR 135
                + R+S     +    N ++   +           GLDES+I+SI + +Y+  +  
Sbjct: 97  TSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYR-KMDG 156

Query: 136 GKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSA 168
              SS+CSVCLSEF E+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S+
Sbjct: 157 FVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 208

[Close]

BLAST of CmaCh06G013320 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-21
Identity = 63/169 (37.28%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 5   PQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLN----- 64
           P I   Q+L      NP+ S       + IAI GI ATAFLL +YY  V   C N     
Sbjct: 40  PPISYEQFLNDGVASNPNLSP------LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNE 99

Query: 65  ----WHRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGK-T 124
                 R D++  L ++S  R    +  +    T GLD+++I+ I   + K      K  
Sbjct: 100 AASESGRSDII--LDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKIN 159

Query: 125 SSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTI 164
            ++CS+CL EF EDE++R++P C+H FH+ CID WL+++ NCPLCR  I
Sbjct: 160 GTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKI 200

The following BLAST results are available for this feature:

BLAST of CmaCh06G013320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	9.7e-74	48.88	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	1.0e-62	44.44	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	8.9e-27	31.10	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	6.0e-23	29.50	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9SRQ8	6.6e-22	37.50	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of CmaCh06G013320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJC3	3.1e-184	100.00	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE...	[more]
A0A6J1FW76	9.1e-176	96.28	RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 ...	[more]
A0A5D3D010	2.7e-143	80.73	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AWQ9	2.7e-143	80.73	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1	[more]
A0A0A0L8B0	2.3e-139	78.59	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 P...	[more]

BLAST of CmaCh06G013320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975064.1	6.5e-184	100.00	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
KAG7028833.1	1.1e-175	96.28	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022942390.1	1.9e-175	96.28	RING-H2 finger protein ATL16 [Cucurbita moschata]	[more]
XP_023540628.1	1.8e-173	95.98	RING-H2 finger protein ATL16 [Cucurbita pepo subsp. pepo]	[more]
XP_038877360.1	7.0e-146	80.73	RING-H2 finger protein ATL16 [Benincasa hispida]	[more]

BLAST of CmaCh06G013320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	6.9e-75	48.88	RING/U-box superfamily protein	[more]
AT1G04360.1	7.1e-64	44.44	RING/U-box superfamily protein	[more]
AT5G17600.1	6.3e-28	31.10	RING/U-box superfamily protein	[more]
AT3G03550.1	4.7e-23	37.50	RING/U-box superfamily protein	[more]
AT4G17905.1	3.4e-21	37.28	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 118..159 e-value: 1.2E-6 score: 38.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 117..160 e-value: 9.5E-13 score: 48.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 118..160 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 80..166 e-value: 2.9E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 17..313
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 117..160 e-value: 2.5868E-17 score: 72.3345
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 100..165
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 17..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G013320.1	CmaCh06G013320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity