CmaCh06G012120 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G012120
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DAR GTPase 2, mitochondrial-like
Location	Cma_Chr06: 8083329 .. 8086310 (-)
RNA-Seq Expression	CmaCh06G012120
Synteny	CmaCh06G012120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTAAAATGGCCGCGGAAACTTGATGAGAAGAACCGAGAAGAATGGCTACGGGTGTCGGAAACTGAACGTCCGGCGGATGGTAAGTTCCTAAAATGGCGGCCGCCTCTTGTGCTGTCGTCGAACGAATTCCACTGGTCGATTTTGTTATCGAGGTTAGAGATGCTATGGTATGCTAGCTTCTACTATTGTTTATTCGCTCTCATTGCATGTTGTTTAATTTCGTATCGGCACCTCCAAGTGTTCATTGAAATGCCGGTTCACGATGAGTTAAATTTTTTAGTTTCAGTTCATTTCCTGTTATCTTCTTTTTCCAATCTATTTGGAATCATAGAGTTGTTTATTCTTTTTTGTGGGGGTTTGATTCGGAAGAATGAAGTTGTATTGAAACTGATGGATTACGTTTGTAATTATGGAGGGAACGAATCACTTTAAATGTTTGTTTATTCCTCTACGTGTTATTGCTTTGTTTTGTTTTCTTCAGATTCCGATGTCATCTGAATATGAAATCATGAAAAATTATCCACCATCAACGAAACGAATCATTATATTGAACAAGACGGACCTAGCGGATCGGTCACAGACAGAGGTTCGTAATTTCTGTAACTTCCATGTTTTTCCTTCATTTTAGCTTAGCTTTTACTGCTGGAGTTCCTTTCAAGTCATTCTGGATTTCGTAGGTTATTAATGTACCTAATGTGATTTGTCATTGAAGTCTGGTTGATCATAATAATGACAATTCTATGGGATATTTGTGGGGAGAACATGAGAAGATACAATTGAAATACCAGTGGGACGTAATTTATTATCTTCCCTCGTTATGATCAATGATACAGGGGTTTTTAAATTTTCGATTGTTTATGATTTTTCACATGACTTTTACTTCAATTTTTTCCCCTTTTAGTTTAAGTTTGTTCCCCGGTCACCTTATGTGATCTTCCAGTTATCTTTGGATACAAATATATATTTGTTACTTATCAAAATAGAATTGCAGTATATTGATCTTCCAGTTATCTTTGGATACAAATATATATTTGTTACTTATCAAAATAGAATTGCAGTATATGAAGCAGGATTAGTACTTGAGGATCATTTAACATTAATTCTTCAGTAGATATACCATTTTTGAGGTGGTTTATTCTTTTACAGTTTGAATCATATTCAAATCGATTCATTAGTCCAATGTTTCACATGTTTATACTTCACTCTATTAATAGGACTGGACAAGATATTTTGAAGACCATGCATCTCTTATGGCGTTAGGTGAATATTAGGGAGGTAAAGAGCTAAGATGTAATCTTTTTGTGTTCATTTTTAATTGCTATCTTGTTTGAGCAACATATTTTCCTCTTACTTTCCAGCTTTGAAATGCTGTTGATGGTAATTGTCAGATGTCTTGGCGCAACATATTTTCCTCTTACTTTCCAGCTTTGAAATGCTGTTGATGGTAATTGTCAGATGTCTTGGCAGTGTATGCATTTTTTTTTTCTCTAACCATGTTTTGTGCAAAATTAAGTGCCAACTAATTGTAATTTATACATCCCATATTCCAAAATGATACTTTGTCACCGTGGGACAATCCATTATTTGTTCGATTAATTTATACATCCCATATTCCAAAATGATACTTTGTCACCGTGGGACAATCCATTATTTGTTCGATCTTTTGAGCTGGCCTTAGTTGTTCAAATAACAATTAAGGTGAAGGAAGGTCAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCATTATTGTGGGTAGTTCCTACAAAGGATCGGACTAATGACATATACAATACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTATGAGTGTAATAGAAGCATCCGTCGACAAAAGGATCACCCTAAGATGATCATCACATGGCTATTGAGAACGAATCAAATCAAGCTAGAGTTGGACAATTGAAGAAGAGCGGTCATTCTAGTCATGCCACAACAATGATGCTGTTTTGAAATCTAAATGTCACTAAGTCGGCCCTTGCCAGCTCTCTGCATCAAATTGGGAGAATTAGTGCTGTAGGTACATATCTTAAATTGCACAGAATTCAAGTTTTCTAGAGCAGTTGATCCTGGAATTGTTTGGGTGAATGATGATAGTTATTCATCTAATAAGAGAATTGCTATTTATGACATTTTGAAGTATCGCTCACCACCTCACAGAAAAAGGGAAGTTGAAGTATACTATGGTGAGTCCACACCCTTGTGAAACAAAAATTATCAGCAGCTTGAAGGTGTGTCGAAGTTGTCTTACTATCTTGGGGTTACTGATTCAGTTGTTGAGGTGTTTATTCAAAAGTTTACATTATAACATATTTTGGGTTGATCAAGGCTTAATTATCGTCTATCCTTGTAGAAGAAAAAACAATGTGTACTTCTGTTTTGTACAAGTTACTAAATTTCTTCTTGCTTTGATTTACAGATTAGCCAGTCCATCCCAATGTTTATGTGTTAGATACCCAGGGATTTTGCCTCCCAAAATTCTCAACCTCGAGGTCTGTTCCAAGCTTGCTTTATACACCCATCATCCTTGCGTAATTTTTTTCTCCTTCTAGTGTAGCATTTCTGCTAGTTCAGAGACTAGGAGATATTGAGAATCTTGAAACTATTAACTATTCTGTTTTTCCTCTCAAACTGCAGTCGCTTAGAGACATCTTAGTCGGGGAAAATTGTACATTGTACAGTGCCTCTTAACTACTGTCAACTCAAATGTGATAATTATAAGAAGCTGTGACAGCTCGTTGGAGTGTTAGGGGGTATCCATCTGATCACACGCAGGTATAAGCACTATCTGGTTTTTTTTTTATTTTTTTTAAACTGAACCTAATTCATGCAAGTTATTTGGGAATTAGATTATTAGTGTACTAATAAGATACTAGAATTTGAATCTCCAACTTAAAAGGAAAGAATACTAAACTATACTTGAC

mRNA sequence

GGACTAAAATGGCCGCGGAAACTTGATGAGAAGAACCGAGAAGAATGGCTACGGGTGTCGGAAACTGAACGTCCGGCGGATGGTAAGTTCCTAAAATGGCGGCCGCCTCTTGTGCTGTCGTCGAACGAATTCCACTGGTCGATTTTGTTATCGAGGTTAGAGATGCTATGATTCCGATGTCATCTGAATATGAAATCATGAAAAATTATCCACCATCAACGAAACGAATCATTATATTGAACAAGACGGACCTAGCGGATCGGTCACAGACAGAGGACTGGACAAGATATTTTGAAGACCATGCATCTCTTATGGCGTTAGATGTCTTGGCGCAACATATTTTCCTCTTACTTTCCAGCTTTGAAATGCTGTTGATGTGCTGTAGATTAGCCAGTCCATCCCAATGTTTATGTGTTAGATACCCAGGGATTTTGCCTCCCAAAATTCTCAACCTCGAGTCGCTTAGAGACATCTTAGTCGGGGAAAATTGTACATTGTACAGTGCCTCTTAACTACTGTCAACTCAAATGTGATAATTATAAGAAGCTGTGACAGCTCGTTGGAGTGTTAGGGGGTATCCATCTGATCACACGCAGGTATAAGCACTATCTGGTTTTTTTTTTATTTTTTTTAAACTGAACCTAATTCATGCAAGTTATTTGGGAATTAGATTATTAGTGTACTAATAAGATACTAGAATTTGAATCTCCAACTTAAAAGGAAAGAATACTAAACTATACTTGAC

Coding sequence (CDS)

ATGGCGGCCGCCTCTTGTGCTGTCGTCGAACGAATTCCACTGGTCGATTTTGTTATCGAGGTTAGAGATGCTATGATTCCGATGTCATCTGAATATGAAATCATGAAAAATTATCCACCATCAACGAAACGAATCATTATATTGAACAAGACGGACCTAGCGGATCGGTCACAGACAGAGGACTGGACAAGATATTTTGAAGACCATGCATCTCTTATGGCGTTAGATGTCTTGGCGCAACATATTTTCCTCTTACTTTCCAGCTTTGAAATGCTGTTGATGTGCTGTAGATTAGCCAGTCCATCCCAATGTTTATGTGTTAGATACCCAGGGATTTTGCCTCCCAAAATTCTCAACCTCGAGTCGCTTAGAGACATCTTAGTCGGGGAAAATTGTACATTGTACAGTGCCTCTTAA

Protein sequence

MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTEDWTRYFEDHASLMALDVLAQHIFLLLSSFEMLLMCCRLASPSQCLCVRYPGILPPKILNLESLRDILVGENCTLYSAS

Homology

[Close]

BLAST of CmaCh06G012120 vs. ExPASy Swiss-Prot
Match: O82497 (DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-13
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPP-STKRIIILNKTDLADRSQT 60
           MAAA  A+ ERIPLVDFV+E+RDA IP+SSEYE+++ + P  +KRII+LNK +LAD  + 
Sbjct: 33  MAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIVLNKMELADPLEL 92

Query: 61  EDWTRYFED 69
           +    YFE+
Sbjct: 93  KKCIDYFEE 101

[Close]

BLAST of CmaCh06G012120 vs. ExPASy Swiss-Prot
Match: Q8L607 (Short integuments 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIN2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
          MAAA+ A+  R+ L D VIEVRDA IP+SS  E +++   + +RII LNK DLA+ +   
Sbjct: 33 MAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDLANPNVLN 92

Query: 61 DWTRYFE 68
           WTR+FE
Sbjct: 93 KWTRHFE 99

[Close]

BLAST of CmaCh06G012120 vs. ExPASy Swiss-Prot
Match: C5D8U8 (Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.2e-08
Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSE----YEIMKNYPPSTKRIIILNKTDLADR 60
          MA A   V E++ L+D V E+ DA IP+SS     +EI+ N P    RI++LNK D+AD 
Sbjct: 12 MAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKP----RIVLLNKADMADE 71

Query: 61 SQTEDWTRYFEDHASLMALDVLAQ 81
          + TE W  YFE    L AL + AQ
Sbjct: 72 TVTEQWIAYFE-RQQLHALAIDAQ 90

[Close]

BLAST of CmaCh06G012120 vs. ExPASy Swiss-Prot
Match: Q819W8 (Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=rbgA PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.4e-07
Identity = 30/80 (37.50%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
          MA A   V E++ L+D VIE+ DA +P+SS   ++        R+++LNK D+AD   T+
Sbjct: 10 MAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRLTK 69

Query: 61 DWTRYFEDHASLMALDVLAQ 81
           W  YF++    MA+ + AQ
Sbjct: 70 QWIAYFKEKGH-MAISINAQ 88

[Close]

BLAST of CmaCh06G012120 vs. ExPASy Swiss-Prot
Match: Q8H1F6 (DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.7e-07
Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 10  ERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTEDWTRYF 67
           E++ L+D VIEVRDA IP+S+ +  M  +  + KRI++LN+ D+       DW RYF
Sbjct: 112 EQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYF 168

[Close]

BLAST of CmaCh06G012120 vs. ExPASy TrEMBL
Match: A0A6J1IJ32 (DAR GTPase 2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111473816 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
          MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE
Sbjct: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60

Query: 61 DWTRYFEDHASLMAL 76
          DWTRYFEDHASLMAL
Sbjct: 61 DWTRYFEDHASLMAL 75

[Close]

BLAST of CmaCh06G012120 vs. ExPASy TrEMBL
Match: A0A1S3BA35 (DAR GTPase 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487836 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AV ERIPLVDFV+EVRDA IPMSSEYE+MKN+PPS+KRII+LNKTDLAD+ QTE
Sbjct: 32  MAAASRAVAERIPLVDFVLEVRDARIPMSSEYEMMKNHPPSSKRIIVLNKTDLADQLQTE 91

Query: 61  DWTRYFEDH 70
            WTRYFEDH
Sbjct: 92  VWTRYFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. ExPASy TrEMBL
Match: A0A6J1HE44 (DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462723 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.5e-23
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AVVERIPLVDFV+EVRDA IP +SEYE+MKNYP S+KRIIILNKTDLADRSQTE
Sbjct: 32  MAAASRAVVERIPLVDFVLEVRDARIPKTSEYELMKNYPLSSKRIIILNKTDLADRSQTE 91

Query: 61  DWTRYFEDH 70
            WTR+FEDH
Sbjct: 92  AWTRFFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. ExPASy TrEMBL
Match: A0A1S3BAJ4 (DAR GTPase 2, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487836 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.9e-23
Identity = 82/185 (44.32%), Postives = 100/185 (54.05%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AV ERIPLVDFV+EVRDA IPMSSEYE+MKN+PPS+KRII+LNKTDLAD+ QTE
Sbjct: 32  MAAASRAVAERIPLVDFVLEVRDARIPMSSEYEMMKNHPPSSKRIIVLNKTDLADQLQTE 91

Query: 61  DWTRYFEDHASLM-------------ALDVLAQHIFLLLSS------FEMLLM------- 120
            WTRYFEDH  +               L+ L   +  L  S        M+L+       
Sbjct: 92  VWTRYFEDHNCISYCVNSHNKENIREFLNFLQSRVRELKRSGHSSHATTMMLVGIPNVEK 151

Query: 121 -------------------CCRLASPSQCLCVRYPGILPPKILNLE---------SLRDI 132
                                ++AS      +  PGI PPKI N+E         ++RDI
Sbjct: 152 GKLKHAVVSSQPGETKNISSLKIASHPNVYVLDTPGIFPPKIDNIEVCSKLALTGAIRDI 211

[Close]

BLAST of CmaCh06G012120 vs. ExPASy TrEMBL
Match: A0A6J1KB62 (DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492297 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AVVERIPLVDFV+EVRDA IP +SEYE+MKNY PS+KRIIILNKTDLADRSQTE
Sbjct: 32  MAAASRAVVERIPLVDFVLEVRDARIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE 91

Query: 61  DWTRYFEDH 70
            WTR FEDH
Sbjct: 92  AWTRLFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. NCBI nr
Match: XP_022974969.1 (DAR GTPase 2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
          MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE
Sbjct: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60

Query: 61 DWTRYFEDHASLMAL 76
          DWTRYFEDHASLMAL
Sbjct: 61 DWTRYFEDHASLMAL 75

[Close]

BLAST of CmaCh06G012120 vs. NCBI nr
Match: XP_038884377.1 (DAR GTPase 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 121.3 bits (303), Expect = 6.4e-24
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AV ERIPL DFV+EVRDA +PMSSEYEIMKNYPPS+KRII+LNK DLADRSQTE
Sbjct: 32  MAAASRAVAERIPLADFVLEVRDARVPMSSEYEIMKNYPPSSKRIIVLNKADLADRSQTE 91

Query: 61  DWTRYFEDH 70
            WTRYFEDH
Sbjct: 92  VWTRYFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. NCBI nr
Match: XP_023546448.1 (DAR GTPase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.3 bits (303), Expect = 6.4e-24
Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AVVERIPLVDFV+EVRDA +P +SEYE+MKNYPPS+KRIIILNKTDLADRSQTE
Sbjct: 32  MAAASRAVVERIPLVDFVLEVRDARVPKTSEYELMKNYPPSSKRIIILNKTDLADRSQTE 91

Query: 61  DWTRYFEDH 70
            WTR+FEDH
Sbjct: 92  AWTRFFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. NCBI nr
Match: XP_008444550.1 (PREDICTED: DAR GTPase 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 118.2 bits (295), Expect = 5.5e-23
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AV ERIPLVDFV+EVRDA IPMSSEYE+MKN+PPS+KRII+LNKTDLAD+ QTE
Sbjct: 32  MAAASRAVAERIPLVDFVLEVRDARIPMSSEYEMMKNHPPSSKRIIVLNKTDLADQLQTE 91

Query: 61  DWTRYFEDH 70
            WTRYFEDH
Sbjct: 92  VWTRYFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. NCBI nr
Match: XP_022962198.1 (DAR GTPase 2, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 117.9 bits (294), Expect = 7.1e-23
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
           MAAAS AVVERIPLVDFV+EVRDA IP +SEYE+MKNYP S+KRIIILNKTDLADRSQTE
Sbjct: 32  MAAASRAVVERIPLVDFVLEVRDARIPKTSEYELMKNYPLSSKRIIILNKTDLADRSQTE 91

Query: 61  DWTRYFEDH 70
            WTR+FEDH
Sbjct: 92  AWTRFFEDH 100

[Close]

BLAST of CmaCh06G012120 vs. TAIR 10
Match: AT4G10650.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-14
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 1   MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPP-STKRIIILNKTDLADRSQT 60
           MAAA  A+ ERIPLVDFV+E+RDA IP+SSEYE+++ + P  +KRII+LNK +LAD  + 
Sbjct: 33  MAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIVLNKMELADPLEL 92

Query: 61  EDWTRYFED 69
           +    YFE+
Sbjct: 93  KKCIDYFEE 101

[Close]

BLAST of CmaCh06G012120 vs. TAIR 10
Match: AT2G41670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.5e-10
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 1  MAAASCAVVERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTE 60
          MAAA+ A+  R+ L D VIEVRDA IP+SS  E +++   + +RII LNK DLA+ +   
Sbjct: 33 MAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDLANPNVLN 92

Query: 61 DWTRYFE 68
           WTR+FE
Sbjct: 93 KWTRHFE 99

[Close]

BLAST of CmaCh06G012120 vs. TAIR 10
Match: AT4G02790.1 (GTP-binding family protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.0e-08
Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 10  ERIPLVDFVIEVRDAMIPMSSEYEIMKNYPPSTKRIIILNKTDLADRSQTEDWTRYF 67
           E++ L+D VIEVRDA IP+S+ +  M  +  + KRI++LN+ D+       DW RYF
Sbjct: 112 EQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYF 168

The following BLAST results are available for this feature:

BLAST of CmaCh06G012120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82497	4.1e-13	56.52	DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1	[more]
Q8L607	3.6e-09	50.75	Short integuments 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIN2 PE=1 ...	[more]
C5D8U8	5.2e-08	45.24	Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA...	[more]
Q819W8	4.4e-07	37.50	Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JC...	[more]
Q8H1F6	5.7e-07	43.86	DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1	[more]

BLAST of CmaCh06G012120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJ32	1.4e-32	100.00	DAR GTPase 2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111473816 PE=...	[more]
A0A1S3BA35	2.6e-23	84.06	DAR GTPase 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487836 P...	[more]
A0A6J1HE44	3.5e-23	85.51	DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A1S3BAJ4	5.9e-23	44.32	DAR GTPase 2, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487836 P...	[more]
A0A6J1KB62	1.0e-22	85.51	DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114922...	[more]

BLAST of CmaCh06G012120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974969.1	2.9e-32	100.00	DAR GTPase 2, mitochondrial-like [Cucurbita maxima]	[more]
XP_038884377.1	6.4e-24	85.51	DAR GTPase 2, mitochondrial [Benincasa hispida]	[more]
XP_023546448.1	6.4e-24	85.51	DAR GTPase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_008444550.1	5.5e-23	84.06	PREDICTED: DAR GTPase 2, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_022962198.1	7.1e-23	85.51	DAR GTPase 2, mitochondrial isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh06G012120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10650.1	2.9e-14	56.52	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G41670.1	2.5e-10	50.75	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G02790.1	4.0e-08	43.86	GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..92 e-value: 8.5E-10 score: 40.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..68
None	No IPR available	PANTHER	PTHR45782:SF1	DAR GTPASE 2, MITOCHONDRIAL	coord: 1..71
None	No IPR available	PANTHER	PTHR45782	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G012120.1	CmaCh06G012120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding