CmaCh06G011200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G011200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	glyoxylate/hydroxypyruvate reductase HPR3-like
Location	Cma_Chr06: 7542308 .. 7544123 (-)
RNA-Seq Expression	CmaCh06G011200
Synteny	CmaCh06G011200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTCTCCTGTTCCTTGTTCATCTTGAGTGTGTGTATATGAGTTGTTGAGTGTGTGCCCTTTGTTGAACATGTGTGCGGGTGGTTGAGCGATCCTAACATTCCTCCTTATTTTCTCCCTCACCCAATCAGCCAAAGGGAATTCGGCTTGTTTTATTATTAATTTTTTTGTTTACGAGAAAGTAGAATGGCGGTCGAAAGGCAACCCAACGAGCTTCCTCAGGTTTTGGTTCTAAGTCCTCCCGCAATTTTCACATCTCTGGAATCCCAATTCTCAATCAGATTTCATATGCTAAAACCATGGGATTCCAAACTCCCATTACTCCAATTTCTCACCTCGTATGCCCAATCCGTCCCAGCCATGCTCGTTGTTCCAGGTGACCGTCTTCTAGTAAACTCCGCCATTCTCGACTGCCTCCCGTCGCTGAAGCTCGTCGTCACTACCAGCGCCGGTGTTGATCACTTGGATGTGGCGGAGCTACGGCGGCGTCGGGTGGCCATTGCCTATGCAGGAAACTTGTTTTCTCAAGATGTCGCTGACATGGCGGTGGGATTACTAATCGACGTTCTGAGGAATGTGTCGGCAGGAGATCGGTTCGTGAGGCAAGGGCTTTGGCCTACGCAAGGGGATTTCCCTCTCGCATTAAAGGTCCAATGGTTTTATTGCTAATTCCTGTTTTCTGTTCTTCATTTCCAATCACCTCAGTAACAGAAAGATTCAATGATGTGACTGATTTATTGAAGAGGTGGANTTGAATTTGGATGTTTTAAAATTTTCACAGTTAAGCGGCAAGCAAATTGGGATAGTTGGATTGGGGAAAATAGGCACAGAAGTAGCCAAACGGCTAGAAGGTTTCGGCTGCAAAATCTCATACAATTCAAGAACCAAAAAGCCAACACTTCCATACCCCTTCTATTCCGATCTCCATGAACTTGCAGCCAACTGTGAAGCCCTCATCATTTGCTGTGGGTTAACGGCCGAAACCCGCCATATGATCGACAGGGACGTGATGGTTGCGTTAGGCAGAGATGGAGTGATAGTCAACATCGGCCGAGGGGCGATCGTCGACGAGACAGAACTGGTTCGACGCTTGATTCAAGGGGAGCTTGGGGGAGCTGGGCTGGATGTGTTTGAGAATGAACCTGAAGTTCCTAAAGAGCTGTTTAATCTTGATAATGTAGTGTTGTCGCCACATGTTGCTGTCTTAACAACTGAATCTATGGTGGGATTGACTCAATTGGCGTTGGGGAACTTGGAGGCATTCTTCTCAAACAAACCTTTGGTGTCTCCGTATGTGGATTAGTTGAGGTGCAGCTAGCTGAGTTCAACAGGGAAACTACAAAACTTAATGACAGAGGTAACTTGCTTTGTATTGGTGAATTCAACTCAACATCCTTGAAGTTTTATGTGTTTTTTTTCTCTCATAATTTATGCTGAGAAGAAGCTCGTTAATACCGGGTTTCTATCTTCTAAAGTTAATCCGTCCGGTGTAGGAGCTTGTAGGAGCTAGTAGATATTGTCTTTTTGGGGCTTTTTCTTTCGGACTTTTCCTCACAATTTTAAAATGCATCAACTAGGGAGAGGTTTCGACATTCTTACAAGAATGCTTCATTTCCCTCTCCAACCAAGATAGGATCTCACTAAGTATTGTGGGAATCTATTCATTTATAATATCATGTCTTGTATATTAGAAACTGTTCTTCACTATTCCCTGCATAAACATCATCAAAGGTACTTAGCTGGTGATGGAAGATTAGTCCTAAATGAATTTCATGGTTATTATAAACTAAATATGCCCAGCACTTGTTACAGTC

mRNA sequence

TTTCTCTCTCCTGTTCCTTGTTCATCTTGAGTGTGTGTATATGAGTTGTTGAGTGTGTGCCCTTTGTTGAACATGTGTGCGGGTGGTTGAGCGATCCTAACATTCCTCCTTATTTTCTCCCTCACCCAATCAGCCAAAGGGAATTCGGCTTGTTTTATTATTAATTTTTTTGTTTACGAGAAAGTAGAATGGCGGTCGAAAGGCAACCCAACGAGCTTCCTCAGGTTTTGGTTCTAAGTCCTCCCGCAATTTTCACATCTCTGGAATCCCAATTCTCAATCAGATTTCATATGCTAAAACCATGGGATTCCAAACTCCCATTACTCCAATTTCTCACCTCGTATGCCCAATCCGTCCCAGCCATGCTCGTTGTTCCAGGTGACCGTCTTCTAGTAAACTCCGCCATTCTCGACTGCCTCCCGTCGCTGAAGCTCGTCGTCACTACCAGCGCCGGTGTTGATCACTTGGATGTGGCGGAGCTACGGCGGCGTCGGGTGGCCATTGCCTATGCAGGAAACTTGTTTTCTCAAGATGTCGCTGACATGGCGGTGGGATTACTAATCGACGTTCTGAGGAATGTGTCGGCAGGAGATCGGTTCGTGAGGCAAGGGCTTTGGCCTACGCAAGGGGATTTCCCTCTCGCATTAAAGTTAAGCGGCAAGCAAATTGGGATAGTTGGATTGGGGAAAATAGGCACAGAAGTAGCCAAACGGCTAGAAGGTTTCGGCTGCAAAATCTCATACAATTCAAGAACCAAAAAGCCAACACTTCCATACCCCTTCTATTCCGATCTCCATGAACTTGCAGCCAACTGTGAAGCCCTCATCATTTGCTGTGGGTTAACGGCCGAAACCCGCCATATGATCGACAGGGACGTGATGGTTGCGTTAGGCAGAGATGGAGTGATAGTCAACATCGGCCGAGGGGCGATCGTCGACGAGACAGAACTGGTTCGACGCTTGATTCAAGGGGAGCTTGGGGGAGCTGGGCTGGATGTGTTTGAGAATGAACCTGAAGTTCCTAAAGAGCTGTTTAATCTTGATAATGTAGTGTTGTCGCCACATGTTGCTGTCTTAACAACTGAATCTATGGTGGGATTGACTCAATTGGCGTTGGGGAACTTGGAGGCATTCTTCTCAAACAAACCTTTGGTGTCTCCGTATGTGGATTAGTTGAGGTGCAGCTAGCTGAGTTCAACAGGGAAACTACAAAACTTAATGACAGAGGTAACTTGCTTTGTATTGGTGAATTCAACTCAACATCCTTGAAGTTTTATGTGTTTTTTTTCTCTCATAATTTATGCTGAGAAGAAGCTCGTTAATACCGGGTTTCTATCTTCTAAAGTTAATCCGTCCGGTGTAGGAGCTTGTAGGAGCTAGTAGATATTGTCTTTTTGGGGCTTTTTCTTTCGGACTTTTCCTCACAATTTTAAAATGCATCAACTAGGGAGAGGTTTCGACATTCTTACAAGAATGCTTCATTTCCCTCTCCAACCAAGATAGGATCTCACTAAGTATTGTGGGAATCTATTCATTTATAATATCATGTCTTGTATATTAGAAACTGTTCTTCACTATTCCCTGCATAAACATCATCAAAGGTACTTAGCTGGTGATGGAAGATTAGTCCTAAATGAATTTCATGGTTATTATAAACTAAATATGCCCAGCACTTGTTACAGTC

Coding sequence (CDS)

ATGGCGGTCGAAAGGCAACCCAACGAGCTTCCTCAGGTTTTGGTTCTAAGTCCTCCCGCAATTTTCACATCTCTGGAATCCCAATTCTCAATCAGATTTCATATGCTAAAACCATGGGATTCCAAACTCCCATTACTCCAATTTCTCACCTCGTATGCCCAATCCGTCCCAGCCATGCTCGTTGTTCCAGGTGACCGTCTTCTAGTAAACTCCGCCATTCTCGACTGCCTCCCGTCGCTGAAGCTCGTCGTCACTACCAGCGCCGGTGTTGATCACTTGGATGTGGCGGAGCTACGGCGGCGTCGGGTGGCCATTGCCTATGCAGGAAACTTGTTTTCTCAAGATGTCGCTGACATGGCGGTGGGATTACTAATCGACGTTCTGAGGAATGTGTCGGCAGGAGATCGGTTCGTGAGGCAAGGGCTTTGGCCTACGCAAGGGGATTTCCCTCTCGCATTAAAGTTAAGCGGCAAGCAAATTGGGATAGTTGGATTGGGGAAAATAGGCACAGAAGTAGCCAAACGGCTAGAAGGTTTCGGCTGCAAAATCTCATACAATTCAAGAACCAAAAAGCCAACACTTCCATACCCCTTCTATTCCGATCTCCATGAACTTGCAGCCAACTGTGAAGCCCTCATCATTTGCTGTGGGTTAACGGCCGAAACCCGCCATATGATCGACAGGGACGTGATGGTTGCGTTAGGCAGAGATGGAGTGATAGTCAACATCGGCCGAGGGGCGATCGTCGACGAGACAGAACTGGTTCGACGCTTGATTCAAGGGGAGCTTGGGGGAGCTGGGCTGGATGTGTTTGAGAATGAACCTGAAGTTCCTAAAGAGCTGTTTAATCTTGATAATGTAGTGTTGTCGCCACATGTTGCTGTCTTAACAACTGAATCTATGGTGGGATTGACTCAATTGGCGTTGGGGAACTTGGAGGCATTCTTCTCAAACAAACCTTTGGTGTCTCCGTATGTGGATTAG

Protein sequence

MAVERQPNELPQVLVLSPPAIFTSLESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLLVNSAILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVLRNVSAGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSRTKKPTLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAIVDETELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLALGNLEAFFSNKPLVSPYVD

Homology

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BLAST of CmaCh06G011200 vs. ExPASy Swiss-Prot
Match: Q9LE33 (Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana OX=3702 GN=HPR3 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.7e-89
Identity = 168/320 (52.50%), Postives = 225/320 (70.31%), Query Frame = 0


Query: 6   QPNELPQVLVLSPPAIFTSLESQFSIRFH-MLKPWDSKLPLLQFLTSYAQSVPAMLVVPG 65
           + +E P VL+  PP++ T ++   +  F  ++    S   L  F   +A S  A ++   
Sbjct: 3   ESSEPPVVLLHRPPSL-TFMDEILTREFRTLITDTSSSESLPSFFPRHASSARAFVI--S 62

Query: 66  DRLLVNSAILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLL 125
            RL V   +L  LPSL+++V TS G+DH+D+A  +RR + I  AGN FS DVAD AVGLL
Sbjct: 63  GRLPVTDELLSHLPSLQILVCTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADCAVGLL 122

Query: 126 IDVLRNVSAGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKIS 185
           I VLR + A DR+VR G W   GDF L  K+SGK++GIVGLG IG+ VAKRLE FGC IS
Sbjct: 123 ISVLRRIPAADRYVRSGNWAKFGDFQLGSKVSGKRVGIVGLGSIGSFVAKRLESFGCVIS 182

Query: 186 YNSRTKKPTLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIG 245
           YNSR++K + PY +YSD+  LA N + L++CC LT ET H+++R+VM  LG+DGV++N+G
Sbjct: 183 YNSRSQKQSSPYRYYSDILSLAENNDVLVLCCSLTDETHHIVNREVMELLGKDGVVINVG 242

Query: 246 RGAIVDETELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGL 305
           RG ++DE E+V+ L+ G +GGAGLDVFENEP VP+ELF LDNVVLSPH AV T  S+  +
Sbjct: 243 RGKLIDEKEMVKCLVDGVIGGAGLDVFENEPAVPQELFGLDNVVLSPHFAVATPGSLDNV 302

Query: 306 TQLALGNLEAFFSNKPLVSP 325
            Q+AL NL+AFFSN+PL+SP
Sbjct: 303 AQIALANLKAFFSNRPLLSP 319

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BLAST of CmaCh06G011200 vs. ExPASy Swiss-Prot
Match: A5CAL1 (Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR OS=Vitis vinifera OX=29760 GN=2KGR PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.9e-73
Identity = 137/302 (45.36%), Postives = 199/302 (65.89%), Query Frame = 0


Query: 25  LESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLLVNSAILDCLPSLKLVV 84
           LE +   RF + + WD           ++ S+ A  VV    +  ++ +++ LP +++V 
Sbjct: 16  LEQELDKRFKLFRFWDFP-SANDLFREHSNSIRA--VVGNSFIGADAQMIEALPKMEIVS 75

Query: 85  TTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVLRNVSAGDRFVRQGLWP 144
           + S G+D +D+   + + + +    ++ ++DVAD+A+ L++  LR +   DR+VR G W 
Sbjct: 76  SFSVGLDKIDLVRCKEKGIRVTNTPDVLTEDVADLALALILATLRRICESDRYVRSGSW- 135

Query: 145 TQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSRTKKPTLPYPFYSDLHE 204
            +GDF L  K +GK +GI+GLG+IG+ +AKR EGF C ISY+SRT+KP   Y +Y  + E
Sbjct: 136 KKGDFKLTTKFTGKSVGIIGLGRIGSAIAKRAEGFSCPISYHSRTEKPGTNYKYYPSVVE 195

Query: 205 LAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAIVDETELVRRLIQGELG 264
           LA+NC+ L++ C LT ETRH+I+R+V+ ALG  GV++NIGRG  VDE ELV  L++G LG
Sbjct: 196 LASNCQILVVACALTPETRHIINREVINALGPKGVVINIGRGLHVDEPELVSALVEGRLG 255

Query: 265 GAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLALGNLEAFFSNKPLVSP 324
           GAGLDVFENEP VP+EL  +DNVVL PHV   T E+   +  L LGNLEA F NKPL++P
Sbjct: 256 GAGLDVFENEPNVPEELLAMDNVVLLPHVGSGTVETRKDMADLVLGNLEAHFLNKPLLTP 313

Query: 325 YV 327
            V
Sbjct: 316 VV 313

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BLAST of CmaCh06G011200 vs. ExPASy Swiss-Prot
Match: Q65CJ7 (Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides OX=4142 GN=HPPR PE=1 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 7.0e-72
Identity = 144/314 (45.86%), Postives = 206/314 (65.61%), Query Frame = 0


Query: 13  VLVLSPPAIFTSLESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLLVNSA 72
           VL++ P  + T LE +   RF + + W ++     FL   A+S+ A  VV       ++ 
Sbjct: 6   VLMMCP--MSTYLEQELDKRFKLFRYW-TQPAQRDFLALQAESIRA--VVGNSNAGADAE 65

Query: 73  ILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVLRNVS 132
           ++D LP L++V + S G+D +D+ +   + V +    ++ + DVAD+A+GL++ VLR + 
Sbjct: 66  LIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRIC 125

Query: 133 AGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSRTKKP 192
             D++VR+G W   GDF L  K SGK++GI+GLG+IG  VA+R E F C ISY SR+KKP
Sbjct: 126 ECDKYVRRGAWKF-GDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKP 185

Query: 193 TLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAIVDET 252
              Y +Y  + ELA+N + L++ C LT ET H+I+R+V+ ALG  GV++NIGRG  VDE 
Sbjct: 186 NTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEP 245

Query: 253 ELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLALGNL 312
           ELV  L++G LGGAGLDVFE EPEVP++LF L+NVVL PHV   T E+   +  L +GNL
Sbjct: 246 ELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNL 305

Query: 313 EAFFSNKPLVSPYV 327
           EA FS KPL++P V
Sbjct: 306 EAHFSGKPLLTPVV 313

[Close]

BLAST of CmaCh06G011200 vs. ExPASy Swiss-Prot
Match: Q9CA90 (Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana OX=3702 GN=HPR2 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.9e-70
Identity = 138/314 (43.95%), Postives = 206/314 (65.61%), Query Frame = 0


Query: 13  VLVLSPPAIFTSLESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLLVNSA 72
           VL++ P + +  LE++   RF++L+ W S    +  L ++  S+ A  VV       ++ 
Sbjct: 6   VLMMCPMSSY--LENELEKRFNLLRFWTSPEKSV-LLETHRNSIRA--VVGNASAGADAQ 65

Query: 73  ILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVLRNVS 132
           ++  LP+L++V + S G+D +D+ + + + + +    ++ ++DVAD+A+GL++ +LR + 
Sbjct: 66  LISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLC 125

Query: 133 AGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSRTKKP 192
             DR+VR G W  QG+F L  K SGK +GI+GLG+IGT +AKR E F C I+Y SRT KP
Sbjct: 126 ECDRYVRSGKW-KQGEFQLTTKFSGKSVGIIGLGRIGTAIAKRAEAFSCPINYYSRTIKP 185

Query: 193 TLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAIVDET 252
            + Y +Y  + +LA N + L++ C LT +TRH++DR VM ALG  GV++NIGRG  VDE 
Sbjct: 186 DVAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVDEQ 245

Query: 253 ELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLALGNL 312
           EL++ L +G LGGA LDVFE EP VP+ELF L+NVVL PHV   T E+   +  L +GNL
Sbjct: 246 ELIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVGNL 305

Query: 313 EAFFSNKPLVSPYV 327
           EA FS K L++P V
Sbjct: 306 EAHFSGKSLLTPVV 313

[Close]

BLAST of CmaCh06G011200 vs. ExPASy Swiss-Prot
Match: Q5FTU6 (2-ketogluconate reductase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=GOX0417 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-52
Identity = 117/318 (36.79%), Postives = 177/318 (55.66%), Query Frame = 0


Query: 11  PQVLVLSP--PAIFTSLESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLL 70
           P +L + P  P +   LE  F+     L P+ S    L+ L + A ++    +  G    
Sbjct: 5   PDILTIDPLVPVMKERLEKSFT-----LHPYTS----LENLKNIAPAIRG--ITTGGGSG 64

Query: 71  VNSAILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVL 130
           V S I+D LP+L+++     G D +++ E RRR + +A   N  + DVADMAV L++ V+
Sbjct: 65  VPSEIMDALPNLEVISVNGVGTDRINLDEARRRNIGVAITQNTLTDDVADMAVALMMAVM 124

Query: 131 RNVSAGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSR 190
           R++   D FVR G WP+    PL   L+ K++GI G G IG  +AKR+  FG +++Y + 
Sbjct: 125 RSIVTNDAFVRAGKWPS-ATAPLGRSLTRKKVGIAGFGHIGQAIAKRVSAFGMEVAYFNS 184

Query: 191 TKKPTLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAI 250
             +P     F  DL  LA  C+ LI+       + +MIDRD + ALG+DG +VNI RG +
Sbjct: 185 HARPESTCHFEPDLKALATWCDVLILAVSGGPRSANMIDRDTLDALGKDGFLVNIARGTV 244

Query: 251 VDETELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLA 310
           VDE  L+  L +  + GAGLDVF+NEP +     +L N VL  H A  T E+   +  L 
Sbjct: 245 VDEAALLSALQEKRIAGAGLDVFQNEPNINPAFLSLPNTVLQAHQASATVETRTTMANLV 304

Query: 311 LGNLEAFFSNKPLVSPYV 327
           + NL A+F++K L++P +
Sbjct: 305 VDNLIAYFTDKTLLTPVI 310

[Close]

BLAST of CmaCh06G011200 vs. TAIR 10
Match: AT2G45630.2 (D-isomer specific 2-hydroxyacid dehydrogenase family protein )

HSP 1 Score: 349.0 bits (894), Expect = 4.2e-96
Identity = 177/327 (54.13%), Postives = 240/327 (73.39%), Query Frame = 0


Query: 1   MAVERQPNELPQVLVLSPPAIFTSLESQF--SIRFHMLKPWDSKLPLLQFLTSYAQSVPA 60
           MA      +LP+VL++  P     L   F  S +F +LK ++S LPL +FL  ++ S+ A
Sbjct: 12  MATSSSTEKLPRVLIVKRPDAMAVLGDGFVASTKFEILKAFESPLPLPEFLAYHSDSISA 71

Query: 61  MLVVPGDRLLVNSAILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVAD 120
             ++      V + ++  LP+L+LVVTTSAGVDH+D+ E RRR +++A AG+ FS+DVAD
Sbjct: 72  --IIAPVAAPVTADLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSEDVAD 131

Query: 121 MAVGLLIDVLRNVSAGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEG 180
            AVGLLIDV R +SA +RFV+Q  WP +GD+PL  KL  K+IGIVGLG IG++VA RL+ 
Sbjct: 132 TAVGLLIDVFRRISAANRFVKQRFWPLKGDYPLGSKLGRKRIGIVGLGSIGSKVATRLDA 191

Query: 181 FGCKISYNSRTKKP-TLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRD 240
           FGC+ISY+SR +KP  +PY +Y D+ E+AAN +ALIICC L  +T  +I++DV+ ALG+ 
Sbjct: 192 FGCQISYSSRNRKPYDVPYHYYMDIEEMAANSDALIICCELNEKTLRLINKDVLSALGKR 251

Query: 241 GVIVNIGRGAIVDETELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLT 300
           GVIVN+ RGAI+DE E+VR L +GE+GGAGLDVFE+EP VPKELF LDNVV SPH A +T
Sbjct: 252 GVIVNVARGAIIDEEEMVRCLREGEIGGAGLDVFEDEPNVPKELFELDNVVFSPHSAFMT 311

Query: 301 TESMVGLTQLALGNLEAFFSNKPLVSP 325
            E +  L ++ +GN+EAFFSNKPL++P
Sbjct: 312 LEGLEELGKVVVGNIEAFFSNKPLLTP 336

[Close]

BLAST of CmaCh06G011200 vs. TAIR 10
Match: AT1G12550.1 (D-isomer specific 2-hydroxyacid dehydrogenase family protein )

HSP 1 Score: 329.7 bits (844), Expect = 2.6e-90
Identity = 168/320 (52.50%), Postives = 225/320 (70.31%), Query Frame = 0


Query: 6   QPNELPQVLVLSPPAIFTSLESQFSIRFH-MLKPWDSKLPLLQFLTSYAQSVPAMLVVPG 65
           + +E P VL+  PP++ T ++   +  F  ++    S   L  F   +A S  A ++   
Sbjct: 3   ESSEPPVVLLHRPPSL-TFMDEILTREFRTLITDTSSSESLPSFFPRHASSARAFVI--S 62

Query: 66  DRLLVNSAILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLL 125
            RL V   +L  LPSL+++V TS G+DH+D+A  +RR + I  AGN FS DVAD AVGLL
Sbjct: 63  GRLPVTDELLSHLPSLQILVCTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADCAVGLL 122

Query: 126 IDVLRNVSAGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKIS 185
           I VLR + A DR+VR G W   GDF L  K+SGK++GIVGLG IG+ VAKRLE FGC IS
Sbjct: 123 ISVLRRIPAADRYVRSGNWAKFGDFQLGSKVSGKRVGIVGLGSIGSFVAKRLESFGCVIS 182

Query: 186 YNSRTKKPTLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIG 245
           YNSR++K + PY +YSD+  LA N + L++CC LT ET H+++R+VM  LG+DGV++N+G
Sbjct: 183 YNSRSQKQSSPYRYYSDILSLAENNDVLVLCCSLTDETHHIVNREVMELLGKDGVVINVG 242

Query: 246 RGAIVDETELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGL 305
           RG ++DE E+V+ L+ G +GGAGLDVFENEP VP+ELF LDNVVLSPH AV T  S+  +
Sbjct: 243 RGKLIDEKEMVKCLVDGVIGGAGLDVFENEPAVPQELFGLDNVVLSPHFAVATPGSLDNV 302

Query: 306 TQLALGNLEAFFSNKPLVSP 325
            Q+AL NL+AFFSN+PL+SP
Sbjct: 303 AQIALANLKAFFSNRPLLSP 319

[Close]

BLAST of CmaCh06G011200 vs. TAIR 10
Match: AT1G79870.1 (D-isomer specific 2-hydroxyacid dehydrogenase family protein )

HSP 1 Score: 266.5 bits (680), Expect = 2.7e-71
Identity = 138/314 (43.95%), Postives = 206/314 (65.61%), Query Frame = 0


Query: 13  VLVLSPPAIFTSLESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLLVNSA 72
           VL++ P + +  LE++   RF++L+ W S    +  L ++  S+ A  VV       ++ 
Sbjct: 6   VLMMCPMSSY--LENELEKRFNLLRFWTSPEKSV-LLETHRNSIRA--VVGNASAGADAQ 65

Query: 73  ILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVLRNVS 132
           ++  LP+L++V + S G+D +D+ + + + + +    ++ ++DVAD+A+GL++ +LR + 
Sbjct: 66  LISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLC 125

Query: 133 AGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSRTKKP 192
             DR+VR G W  QG+F L  K SGK +GI+GLG+IGT +AKR E F C I+Y SRT KP
Sbjct: 126 ECDRYVRSGKW-KQGEFQLTTKFSGKSVGIIGLGRIGTAIAKRAEAFSCPINYYSRTIKP 185

Query: 193 TLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAIVDET 252
            + Y +Y  + +LA N + L++ C LT +TRH++DR VM ALG  GV++NIGRG  VDE 
Sbjct: 186 DVAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVDEQ 245

Query: 253 ELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLALGNL 312
           EL++ L +G LGGA LDVFE EP VP+ELF L+NVVL PHV   T E+   +  L +GNL
Sbjct: 246 ELIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVGNL 305

Query: 313 EAFFSNKPLVSPYV 327
           EA FS K L++P V
Sbjct: 306 EAHFSGKSLLTPVV 313

[Close]

BLAST of CmaCh06G011200 vs. TAIR 10
Match: AT1G79870.2 (D-isomer specific 2-hydroxyacid dehydrogenase family protein )

HSP 1 Score: 232.6 bits (592), Expect = 4.4e-61
Identity = 128/314 (40.76%), Postives = 193/314 (61.46%), Query Frame = 0


Query: 13  VLVLSPPAIFTSLESQFSIRFHMLKPWDSKLPLLQFLTSYAQSVPAMLVVPGDRLLVNSA 72
           VL++ P + +  LE++   RF++L+ W S    +  L ++  S+ A  VV       ++ 
Sbjct: 6   VLMMCPMSSY--LENELEKRFNLLRFWTSPEKSV-LLETHRNSIRA--VVGNASAGADAQ 65

Query: 73  ILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVADMAVGLLIDVLRNVS 132
           ++  LP+L++V + S G+D +D+ + + + + +    ++ ++DVAD+A+GL++ +LR + 
Sbjct: 66  LISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLC 125

Query: 133 AGDRFVRQGLWPTQGDFPLALKLSGKQIGIVGLGKIGTEVAKRLEGFGCKISYNSRTKKP 192
             DR+VR G W              KQ      G+IGT +AKR E F C I+Y SRT KP
Sbjct: 126 ECDRYVRSGKW--------------KQ------GRIGTAIAKRAEAFSCPINYYSRTIKP 185

Query: 193 TLPYPFYSDLHELAANCEALIICCGLTAETRHMIDRDVMVALGRDGVIVNIGRGAIVDET 252
            + Y +Y  + +LA N + L++ C LT +TRH++DR VM ALG  GV++NIGRG  VDE 
Sbjct: 186 DVAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVDEQ 245

Query: 253 ELVRRLIQGELGGAGLDVFENEPEVPKELFNLDNVVLSPHVAVLTTESMVGLTQLALGNL 312
           EL++ L +G LGGA LDVFE EP VP+ELF L+NVVL PHV   T E+   +  L +GNL
Sbjct: 246 ELIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVGNL 294

Query: 313 EAFFSNKPLVSPYV 327
           EA FS K L++P V
Sbjct: 306 EAHFSGKSLLTPVV 294

[Close]

BLAST of CmaCh06G011200 vs. TAIR 10
Match: AT2G45630.1 (D-isomer specific 2-hydroxyacid dehydrogenase family protein )

HSP 1 Score: 135.6 bits (340), Expect = 7.3e-32
Identity = 72/157 (45.86%), Postives = 104/157 (66.24%), Query Frame = 0


Query: 1   MAVERQPNELPQVLVLSPPAIFTSLESQF--SIRFHMLKPWDSKLPLLQFLTSYAQSVPA 60
           MA      +LP+VL++  P     L   F  S +F +LK ++S LPL +FL  ++ S+ A
Sbjct: 12  MATSSSTEKLPRVLIVKRPDAMAVLGDGFVASTKFEILKAFESPLPLPEFLAYHSDSISA 71

Query: 61  MLVVPGDRLLVNSAILDCLPSLKLVVTTSAGVDHLDVAELRRRRVAIAYAGNLFSQDVAD 120
             ++      V + ++  LP+L+LVVTTSAGVDH+D+ E RRR +++A AG+ FS+DVAD
Sbjct: 72  --IIAPVAAPVTADLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSEDVAD 131

Query: 121 MAVGLLIDVLRNVSAGDRFVRQGLWPTQGDFPLALKL 156
            AVGLLIDV R +SA +RFV+Q  WP +GD+PL  K+
Sbjct: 132 TAVGLLIDVFRRISAANRFVKQRFWPLKGDYPLGSKV 166

The following BLAST results are available for this feature:

BLAST of CmaCh06G011200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE33	3.7e-89	52.50	Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana OX=3702 GN=HPR...	[more]
A5CAL1	2.9e-73	45.36	Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR OS=Vitis vinifera OX=29760 GN...	[more]
Q65CJ7	7.0e-72	45.86	Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides OX=4142 GN=HPPR ...	[more]
Q9CA90	3.9e-70	43.95	Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana OX=3702 GN=H...	[more]
Q5FTU6	1.6e-52	36.79	2-ketogluconate reductase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=GO...	[more]

BLAST of CmaCh06G011200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45630.2	4.2e-96	54.13	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]
AT1G12550.1	2.6e-90	52.50	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]
AT1G79870.1	2.7e-71	43.95	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]
AT1G79870.2	4.4e-61	40.76	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]
AT2G45630.1	7.3e-32	45.86	D-isomer specific 2-hydroxyacid dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006140	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain	PFAM	PF02826	2-Hacid_dh_C	coord: 121..294 e-value: 4.1E-48 score: 163.1
None	No IPR available	GENE3D	3.40.50.720		coord: 113..297 e-value: 1.9E-98 score: 330.8
None	No IPR available	GENE3D	3.40.50.720		coord: 28..320 e-value: 1.9E-98 score: 330.8
None	No IPR available	PANTHER	PTHR10996	2-HYDROXYACID DEHYDROGENASE-RELATED	coord: 8..324
None	No IPR available	PANTHER	PTHR10996:SF179	D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED	coord: 8..324
None	No IPR available	CDD	cd12156	HPPR	coord: 11..317 e-value: 1.51231E-135 score: 384.898
None	No IPR available	SUPERFAMILY	52283	Formate/glycerate dehydrogenase catalytic domain-like	coord: 47..149
IPR006139	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	PFAM	PF00389	2-Hacid_dh	coord: 54..321 e-value: 2.1E-13 score: 50.4
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 113..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G011200.1	CmaCh06G011200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0030267	glyoxylate reductase (NADP+) activity
molecular_function	GO:0016618	hydroxypyruvate reductase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor