CmaCh06G010880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G010880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB41-like
Location	Cma_Chr06: 7341328 .. 7345171 (-)
RNA-Seq Expression	CmaCh06G010880
Synteny	CmaCh06G010880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGTGGAAATTTTAAAAGACCCACAAGGGAACAGTGTTGGAGGTCTGGTCTTGTCATGGTATGTCCCGTAGTATGAATGTTATTTTCATCATAATAAATGCGTCCCAAATCTCTCTCTGTTCAATAAATGCTAGTCTGCATTGTGAGAATCCGCAATTAATTCTTCTCCTTATTCGCCTATTTCTTATATCAATTGTGCGTAAATTGTAAAACCTCAGAATAAGAAATCTCTGCATTAACTCCCTCAATTTTTTTGGGACAACTTTTACTTTCAATGATGATTCAATTCTTCCTATGCTCAATCGTGTCAGTATTTATTGCAAGAACCAGCTTGAAACTTGCTGATTCTTGTCCTTCCCCTTCAGACCCACTTACCCATTAATTTCCCCTCTTTCAATTTTAGTTGATTGAGATAACGTTTCCCTTTCGCATGGCTTTCCTCCTCCTCTCTCTGTAATTCGCTCTGAAAATTTGCAAGGGAAGGATCTAGGTTCTTTCTTTCACTCTGGTCACAAGAGGGTGGTGTCCCTCTGATTTTGAAAGTTGTGAGATGGGAAGAGCGCCTTGTTGCGATAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTTCTTATCAATTATATCAAGCAAAACAATGGCCATGGAAGCTGGAGATCGCTCCCCAAGCTTGCAGGTTTAGTAATCCAAAATTTTCGCTAGTTCCCACTTGTCATCATTCATTCTGCAGTCAATGTTTATTATAACTTTTTCATTACTTCGAAATTTATTGTCACTGGAGTATAAAAGACAAAGGAGGAAGAAGAAGAAGAAGCTCGAGTAGTTGGGTCCTTTACCCTACTCTCCCTTTCGATCTCCCAATTTCTCATTCATCTCCTTTCTGCGACCTCATAGATTCTTTACAGCAGCTTCTTCCCCTGCTTTGTTACCAAAAAAATGTGCAGAAAAAAGTTCCAGCTGTTAGGAATGATCTAACTACCTCCCGTGATGAGCCCGGGAACAGAGTACACACTTTGTTCAACACTTGAGTCACTTTTGACTATAACTTTGAGGTTCACGGGTTCTTTGTTCGACATTTAAGGATTCTATTGACATGATTAAGTTAAGGGCACAACTCTAATACATTATTAGGAATGATGAATCTTCACAATGATATGATATTGTCCATTCTGAGTATAATCTCTCATGATTTTGCTTTTGGTTTCTTCAAAAAGTCTTGTACAGATAGTATTTCTTGTTTATAAACCCCGAGTCAACACCTTAATTAGTCAATAGGACTCCTCCCCCAATAATCCTCAACACCGGCATCGTTATAGATTTCTGTACTGGTAATCTGTTTTTTACTATAAACGTTCTGTGTGGCCAACAAATGATGCTAAACTAGACAAAAGAGTTCTGCGAATTTTTTTTCTATCAAGGAATGCCTGCCTCAGCCATCCAATAGCATAAGAATAGCTAGTCTTTTGATTTATCTTTAGTTTCTGATACAGCCTCCACTGCAGTCCATGAGATATCGAGTATGGTCACCAGGACCTGACATTTTTTATGCCCATACTTACTCTGTTAGTAGCCCAGCTCTATTCTTAAACAGGATACACCAACAATTTCTTGCACATTTGGAAGGGAACAATTGTTGTCTTACGTTCTTCATTGTTTTATCTCTCTCACTTTGATAAGGATGGTCTTTGTACATGATATGTTTTTTTTAGGTCTTCAACGATGTGGGAAGAGCTGCCGTTTGAGGTGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCACCGAGGAAGAGAAGCTTGTTATTCAGCTCCATGGAATTCTCGGAAACAGGTGATAATACTACATTGTTTTCTTCCTGAATAATATCATAGATTTGATTGTTAAAGTTTATGGTACCTTTTCTTTCATTGCATCCGAATTATCAATTAGTTTGAATTTTGTAACTAGACTACTGCTAGCCGATATTTTTTTCTTTGGACTTTTCCCTCAAAATTTTAAAACGAGTCTACGACGGAGATGTTTTCATATCCTTATAAGAAATGTTTCGTTCTCCTCTCCAGAGGGGTGATCTCACAAATTTTGTCATTTTTGGTTTTTTGAGAAGGAAATCAATTTTATTGATACATGAAACAAAAAGTAACGTAGCCTCCAACACCTAAAGGTGCATTACAAAAAAAAAAAAAAGATGTCCAACTAAAATCAAAGAAGAGAACTATAATGAGTAAAAGTGTCCTAAAAGAAAATTGTCATTTTCGTCTGATGTTTTGCTAACTGTCGCTTTTGTTCTTAGTCTTGAAGCTTCACACATTCCTAATGGTCTCTTTATTAGTCGGTTAAAATATGTTCGAGATATTCTTACTCGTGCTCATTTGTTCGACAGCAAACCAGTCCACAAGGTGCAGACCCCACTCCGTCTCTGCCCCTCTTTCTTTCTTCGTCTAAAATACACTCCAGAGTCCGTATTCTCAGTTTCTGCCCCCTTCTTCCTCTCTTGTTCTGACTGCCACCACGTCCACCCTCCTTCACAGTCACCATCGAGCCCTCTCTCTTTCACTTGCCCTTTTCTCAGATAGAGCCATTACCAGCGAAAGTTCTCTCAGACAACATTAGAGGTCTTTCTTTCTGACCTTCGGCTATAGTGAAAGATGTTTAGCCTGTATTTGCCCAATGGAACCACTTCCAATAAAACTCAAGGCTAAGTCTTGACTCTAAATGGTAGTTTGTAAAACCTGAAGGCCATTCATATTAAAATGTTTGCTTTAACTGAGGTTTCGAGATTCTTTGAAAATCAGGTTTAAAATGTCATCATTCTCGGACTCATCTACTTTGTTCAACGTGTTTTAGCCTTGAATTGTACTGATCGAGCGCTTTGCAGGTGGGCTGCTATTGCTTCTCAACTACCGGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTTTGCACTGGCATTGACCCTCAGACACATGAACCCTTCAACTCTCGCAGCTCCTTCTCTACAGCACCGGCATCACCGAGCACCCGCCACATGGCACAGTGGGAGAGTGCTCGGCTCGAAGCCGAAGCTCGACTTTCAAAGGAATCATCACTCTTCACCCTCCTCCCCACGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCTGAAGTTGGTGAATCATTTCGTAGGTGCAGGGAAGACAAAACAACATGCCAAAGCCAAAGTCCCATATCCTCATCAACTAAATACGACTCGGTTTTCGTCATCGCTACCGACAACGGAGTCGATTACACCGGTGGTTCCTCAACCATGTACAGCAATAATGAAAATGAAGAAACGGAATACAAAAACTTCAAACCAATGGCTGACATTCTGATGTCGAAGTCTGATTCATCGAGTGTGAACGAGTTCGAGGAGTCATCAGACAGTGCATTAGAACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAAGAAAACAACGCATAGCATCTGCAGTAGAGAGATAGCAAAGCTTATGATGATTTGAAGTTGTTTGTATGGTAGGTTAGGTCCCAAAGTTTTGTGGATTGTTGTTACCAAAACTAAACCATTTTTCTTTGTTTTTGTGCTTTGAAATGGAAGCTGTGATGAAAGAAAGCGATTCCTATCGTGGTATCTTCTTCACTAAAGGGGATCTCTACTAAGGGCCAAAGTTCAGTTTGTAGATAGCATATATGGTTCTTCCGGACGTAGAGCCATTACATTATTAGATACAGTGATTAATGTATAAGTGCTTTCAAATCCCATCTATTTTTAATGTAAGT

mRNA sequence

GGAAGTGGAAATTTTAAAAGACCCACAAGGGAACAGTGTTGGAGGTCTGGTCTTGTCATGGTTCTTTCTTTCACTCTGGTCACAAGAGGGTGGTGTCCCTCTGATTTTGAAAGTTGTGAGATGGGAAGAGCGCCTTGTTGCGATAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTTCTTATCAATTATATCAAGCAAAACAATGGCCATGGAAGCTGGAGATCGCTCCCCAAGCTTGCAGGTCTTCAACGATGTGGGAAGAGCTGCCGTTTGAGGTGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCACCGAGGAAGAGAAGCTTGTTATTCAGCTCCATGGAATTCTCGGAAACAGGTGGGCTGCTATTGCTTCTCAACTACCGGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTTTGCACTGGCATTGACCCTCAGACACATGAACCCTTCAACTCTCGCAGCTCCTTCTCTACAGCACCGGCATCACCGAGCACCCGCCACATGGCACAGTGGGAGAGTGCTCGGCTCGAAGCCGAAGCTCGACTTTCAAAGGAATCATCACTCTTCACCCTCCTCCCCACGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCTGAAGTTGGTGAATCATTTCGTAGGTGCAGGGAAGACAAAACAACATGCCAAAGCCAAAGTCCCATATCCTCATCAACTAAATACGACTCGGTTTTCGTCATCGCTACCGACAACGGAGTCGATTACACCGGTGGTTCCTCAACCATGTACAGCAATAATGAAAATGAAGAAACGGAATACAAAAACTTCAAACCAATGGCTGACATTCTGATGTCGAAGTCTGATTCATCGAGTGTGAACGAGTTCGAGGAGTCATCAGACAGTGCATTAGAACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAAGAAAACAACGCATAGCATCTGCAGTAGAGAGATAGCAAAGCTTATGATGATTTGAAGTTGTTTGTATGGTAGGTTAGGTCCCAAAGTTTTGTGGATTGTTGTTACCAAAACTAAACCATTTTTCTTTGTTTTTGTGCTTTGAAATGGAAGCTGTGATGAAAGAAAGCGATTCCTATCGTGGTATCTTCTTCACTAAAGGGGATCTCTACTAAGGGCCAAAGTTCAGTTTGTAGATAGCATATATGGTTCTTCCGGACGTAGAGCCATTACATTATTAGATACAGTGATTAATGTATAAGTGCTTTCAAATCCCATCTATTTTTAATGTAAGT

Coding sequence (CDS)

GGAAGTGGAAATTTTAAAAGACCCACAAGGGAACAGTGTTGGAGGTCTGGTCTTGTCATGGTTCTTTCTTTCACTCTGGTCACAAGAGGGTGGTGTCCCTCTGATTTTGAAAGTTGTGAGATGGGAAGAGCGCCTTGTTGCGATAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTTCTTATCAATTATATCAAGCAAAACAATGGCCATGGAAGCTGGAGATCGCTCCCCAAGCTTGCAGGTCTTCAACGATGTGGGAAGAGCTGCCGTTTGAGGTGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCACCGAGGAAGAGAAGCTTGTTATTCAGCTCCATGGAATTCTCGGAAACAGGTGGGCTGCTATTGCTTCTCAACTACCGGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTTTGCACTGGCATTGACCCTCAGACACATGAACCCTTCAACTCTCGCAGCTCCTTCTCTACAGCACCGGCATCACCGAGCACCCGCCACATGGCACAGTGGGAGAGTGCTCGGCTCGAAGCCGAAGCTCGACTTTCAAAGGAATCATCACTCTTCACCCTCCTCCCCACGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCTGAAGTTGGTGAATCATTTCGTAGGTGCAGGGAAGACAAAACAACATGCCAAAGCCAAAGTCCCATATCCTCATCAACTAAATACGACTCGGTTTTCGTCATCGCTACCGACAACGGAGTCGATTACACCGGTGGTTCCTCAACCATGTACAGCAATAATGAAAATGAAGAAACGGAATACAAAAACTTCAAACCAATGGCTGACATTCTGATGTCGAAGTCTGATTCATCGAGTGTGAACGAGTTCGAGGAGTCATCAGACAGTGCATTAGAACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAAGAAAACAACGCATAG

Protein sequence

GSGNFKRPTREQCWRSGLVMVLSFTLVTRGWCPSDFESCEMGRAPCCDKGLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTNYLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCTGIDPQTHEPFNSRSSFSTAPASPSTRHMAQWESARLEAEARLSKESSLFTLLPTERTTDSDFFLQIWNSEVGESFRRCREDKTTCQSQSPISSSTKYDSVFVIATDNGVDYTGGSSTMYSNNENEETEYKNFKPMADILMSKSDSSSVNEFEESSDSALELLLDFPINNDMSFLEENNA

Homology

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BLAST of CmaCh06G010880 vs. ExPASy Swiss-Prot
Match: Q9M2D9 (Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.4e-93
Identity = 184/301 (61.13%), Postives = 220/301 (73.09%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR PCCDK GLKKGPWT EEDE+L+ +IK+ NGHGSWR+LPKLAGL RCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKK-NGHGSWRTLPKLAGLLRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRGPFT +EEKLVIQLH ILGNRWAAIA+QLPGRTDNEIKNLWNTHLKKRLL  
Sbjct: 61  YLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSM 120

Query: 161 GIDPQTHEPFNSRSSFSTAPASPSTRHMAQWESARLEAEARLSKESSLF--TLLPTERTT 220
           G+DP+THEP  S      AP+SP+TRHMAQWESAR+EAEARLS+ES LF  +       T
Sbjct: 121 GLDPRTHEPLPSYGLAKQAPSSPTTRHMAQWESARVEAEARLSRESMLFSPSFYSGVVKT 180

Query: 221 DSDFFLQIWNSEVGESFRRCRE-DKTTCQSQSPISSSTKYDSVFVIATDNGVDYTGGSST 280
           + D FL+IWNSE+GE+FR     D++T  SQSP S +T   S  + ++ N     GG   
Sbjct: 181 ECDHFLRIWNSEIGEAFRNLAPLDESTITSQSPCSRATSTSSALLKSSTNS---WGGKEV 240

Query: 281 MYSNNENEETEYKNFKPMADILMSKSDSSSVNEFEESSDSALELLLDFPI-NNDMSFLEE 337
             + + ++ + Y N                 +  ++S+DSAL+LLLDFPI ++DMSFLEE
Sbjct: 241 TVAIHGSDYSPYSN-----------------DLEDDSTDSALQLLLDFPISDDDMSFLEE 280

[Close]

BLAST of CmaCh06G010880 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-65
Identity = 142/282 (50.35%), Postives = 184/282 (65.25%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR+PCCDK GLKKGPWT EED+ L+ YI++ +GHGSWRSLP+ AGLQRCGKSCRLRWTN
Sbjct: 1   MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEE-HGHGSWRSLPEKAGLQRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRG FT +EE+ +IQLH +LGNRW+AIA+ LP RTDNEIKN WNTHLKKRL+  
Sbjct: 61  YLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKM 120

Query: 161 GIDPQTHEPFNSRSSFSTAPA--SPSTRHMAQWESARLEAEARLSKESSLFTLLPTERTT 220
           GIDP TH+  N   S ST  +  + +  HMAQWESARLEAEARL++ES L  L   +   
Sbjct: 121 GIDPVTHKHKNETLSSSTGQSKNAATLSHMAQWESARLEAEARLARESKLLHLQHYQNNN 180

Query: 221 DSDFFL----QIWNSEVGESFRRCREDKTTCQSQSPISSSTKYDSVFV---IATDNGVDY 280
           + +         +  +   ++ +  +     Q +SP S+ T  +++ +   I TD     
Sbjct: 181 NLNKSAAPQQHCFTQKTSTNWTKPNQGNGDQQLESPTSTVTFSENLLMPLGIPTD----- 240

Query: 281 TGGSSTMYSNNENEETEYKNFKPMADILMSKSDSSSVNEFEE 313
              SS   +NN NE +       M ++ +S S SS V+  +E
Sbjct: 241 ---SSRNRNNNNNESS------AMIELAVSSSTSSDVSLVKE 267

[Close]

BLAST of CmaCh06G010880 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-63
Identity = 120/182 (65.93%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR+PCCDK GLKKGPWT EED+ L+ YI++ +GHGSWRSLP+ AGL RCGKSCRLRWTN
Sbjct: 1   MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEE-HGHGSWRSLPEKAGLHRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRG F  +EE+ +IQLH +LGNRW+AIA+ LP RTDNEIKN WNTHLKKRL+  
Sbjct: 61  YLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKM 120

Query: 161 GIDPQTHEPFNSR--SSFSTAPASPSTRHMAQWESARLEAEARLSKESSLFTLLPTERTT 220
           GIDP TH+P N    SS   +  +    H AQWESARLEAEARL++ES L  L   +  T
Sbjct: 121 GIDPVTHKPKNETPLSSLGLSKNAAILSHTAQWESARLEAEARLARESKLLHLQHYQTKT 180

[Close]

BLAST of CmaCh06G010880 vs. ExPASy Swiss-Prot
Match: Q9S9Z2 (Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.1e-54
Identity = 94/129 (72.87%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR+PCCD+ GLKKGPWT EED+ LI+YI   +GHGSWR+LPKLA L RCGKSCRLRWTN
Sbjct: 1   MGRSPCCDENGLKKGPWTPEEDQKLIDYI-HKHGHGSWRALPKLADLNRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRG F+ EEE+ ++ LH ILGN+W+AIA+ L GRTDNEIKN WNTHLKK+L+  
Sbjct: 61  YLRPDIKRGKFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKLIQM 120

Query: 161 GIDPQTHEP 169
           GIDP TH+P
Sbjct: 121 GIDPVTHQP 128

[Close]

BLAST of CmaCh06G010880 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-54
Identity = 95/130 (73.08%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 41  MGRAPCCDK--GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWT 100
           MGR+PCC+K  GLKKGPWT EED+ LI+YI   +G+G+WR+LPK AGLQRCGKSCRLRWT
Sbjct: 1   MGRSPCCEKKNGLKKGPWTPEEDQKLIDYI-NIHGYGNWRTLPKNAGLQRCGKSCRLRWT 60

Query: 101 NYLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLC 160
           NYLRPDIKRG F+ EEE+ +IQLH I+GN+W+AIA++LPGRTDNEIKN WNTH++KRLL 
Sbjct: 61  NYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLK 120

Query: 161 TGIDPQTHEP 169
            GIDP TH P
Sbjct: 121 MGIDPVTHTP 129

[Close]

BLAST of CmaCh06G010880 vs. TAIR 10
Match: AT3G61250.1 (myb domain protein 17 )

HSP 1 Score: 342.8 bits (878), Expect = 3.1e-94
Identity = 184/301 (61.13%), Postives = 220/301 (73.09%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR PCCDK GLKKGPWT EEDE+L+ +IK+ NGHGSWR+LPKLAGL RCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKK-NGHGSWRTLPKLAGLLRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRGPFT +EEKLVIQLH ILGNRWAAIA+QLPGRTDNEIKNLWNTHLKKRLL  
Sbjct: 61  YLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSM 120

Query: 161 GIDPQTHEPFNSRSSFSTAPASPSTRHMAQWESARLEAEARLSKESSLF--TLLPTERTT 220
           G+DP+THEP  S      AP+SP+TRHMAQWESAR+EAEARLS+ES LF  +       T
Sbjct: 121 GLDPRTHEPLPSYGLAKQAPSSPTTRHMAQWESARVEAEARLSRESMLFSPSFYSGVVKT 180

Query: 221 DSDFFLQIWNSEVGESFRRCRE-DKTTCQSQSPISSSTKYDSVFVIATDNGVDYTGGSST 280
           + D FL+IWNSE+GE+FR     D++T  SQSP S +T   S  + ++ N     GG   
Sbjct: 181 ECDHFLRIWNSEIGEAFRNLAPLDESTITSQSPCSRATSTSSALLKSSTNS---WGGKEV 240

Query: 281 MYSNNENEETEYKNFKPMADILMSKSDSSSVNEFEESSDSALELLLDFPI-NNDMSFLEE 337
             + + ++ + Y N                 +  ++S+DSAL+LLLDFPI ++DMSFLEE
Sbjct: 241 TVAIHGSDYSPYSN-----------------DLEDDSTDSALQLLLDFPISDDDMSFLEE 280

[Close]

BLAST of CmaCh06G010880 vs. TAIR 10
Match: AT3G01140.1 (myb domain protein 106 )

HSP 1 Score: 245.4 bits (625), Expect = 6.8e-65
Identity = 139/279 (49.82%), Postives = 181/279 (64.87%), Query Frame = 0


Query: 44  APCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTNYLR 103
           +PCCDK GLKKGPWT EED+ L+ YI++ +GHGSWRSLP+ AGLQRCGKSCRLRWTNYLR
Sbjct: 47  SPCCDKAGLKKGPWTPEEDQKLLAYIEE-HGHGSWRSLPEKAGLQRCGKSCRLRWTNYLR 106

Query: 104 PDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCTGID 163
           PDIKRG FT +EE+ +IQLH +LGNRW+AIA+ LP RTDNEIKN WNTHLKKRL+  GID
Sbjct: 107 PDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGID 166

Query: 164 PQTHEPFNSRSSFSTAPA--SPSTRHMAQWESARLEAEARLSKESSLFTLLPTERTTDSD 223
           P TH+  N   S ST  +  + +  HMAQWESARLEAEARL++ES L  L   +   + +
Sbjct: 167 PVTHKHKNETLSSSTGQSKNAATLSHMAQWESARLEAEARLARESKLLHLQHYQNNNNLN 226

Query: 224 FFL----QIWNSEVGESFRRCREDKTTCQSQSPISSSTKYDSVFV---IATDNGVDYTGG 283
                    +  +   ++ +  +     Q +SP S+ T  +++ +   I TD        
Sbjct: 227 KSAAPQQHCFTQKTSTNWTKPNQGNGDQQLESPTSTVTFSENLLMPLGIPTD-------- 286

Query: 284 SSTMYSNNENEETEYKNFKPMADILMSKSDSSSVNEFEE 313
           SS   +NN NE +       M ++ +S S SS V+  +E
Sbjct: 287 SSRNRNNNNNESS------AMIELAVSSSTSSDVSLVKE 310

[Close]

BLAST of CmaCh06G010880 vs. TAIR 10
Match: AT5G15310.1 (myb domain protein 16 )

HSP 1 Score: 245.0 bits (624), Expect = 8.8e-65
Identity = 120/182 (65.93%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR+PCCDK GLKKGPWT EED+ L+ YI++ +GHGSWRSLP+ AGL RCGKSCRLRWTN
Sbjct: 1   MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEE-HGHGSWRSLPEKAGLHRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRG F  +EE+ +IQLH +LGNRW+AIA+ LP RTDNEIKN WNTHLKKRL+  
Sbjct: 61  YLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKM 120

Query: 161 GIDPQTHEPFNSR--SSFSTAPASPSTRHMAQWESARLEAEARLSKESSLFTLLPTERTT 220
           GIDP TH+P N    SS   +  +    H AQWESARLEAEARL++ES L  L   +  T
Sbjct: 121 GIDPVTHKPKNETPLSSLGLSKNAAILSHTAQWESARLEAEARLARESKLLHLQHYQTKT 180

[Close]

BLAST of CmaCh06G010880 vs. TAIR 10
Match: AT5G15310.2 (myb domain protein 16 )

HSP 1 Score: 245.0 bits (624), Expect = 8.8e-65
Identity = 120/182 (65.93%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR+PCCDK GLKKGPWT EED+ L+ YI++ +GHGSWRSLP+ AGL RCGKSCRLRWTN
Sbjct: 1   MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEE-HGHGSWRSLPEKAGLHRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRG F  +EE+ +IQLH +LGNRW+AIA+ LP RTDNEIKN WNTHLKKRL+  
Sbjct: 61  YLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKM 120

Query: 161 GIDPQTHEPFNSR--SSFSTAPASPSTRHMAQWESARLEAEARLSKESSLFTLLPTERTT 220
           GIDP TH+P N    SS   +  +    H AQWESARLEAEARL++ES L  L   +  T
Sbjct: 121 GIDPVTHKPKNETPLSSLGLSKNAAILSHTAQWESARLEAEARLARESKLLHLQHYQTKT 180

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BLAST of CmaCh06G010880 vs. TAIR 10
Match: AT5G16770.1 (myb domain protein 9 )

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-56
Identity = 95/129 (73.64%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 41  MGRAPCCDK-GLKKGPWTSEEDELLINYIKQNNGHGSWRSLPKLAGLQRCGKSCRLRWTN 100
           MGR+PCCD+ GLKKGPWT EED+ LI++I Q +GHGSWR+LPK AGL RCGKSCRLRWTN
Sbjct: 1   MGRSPCCDENGLKKGPWTQEEDDKLIDHI-QKHGHGSWRALPKQAGLNRCGKSCRLRWTN 60

Query: 101 YLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCT 160
           YLRPDIKRG FT EEE+ +I LH +LGN+W++IA  LPGRTDNEIKN WNTHL+K+LL  
Sbjct: 61  YLRPDIKRGNFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHLRKKLLQM 120

Query: 161 GIDPQTHEP 169
           GIDP TH P
Sbjct: 121 GIDPVTHRP 128

The following BLAST results are available for this feature:

BLAST of CmaCh06G010880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2D9	4.4e-93	61.13	Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1	[more]
Q9LE63	1.3e-65	50.35	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]
Q9LXF1	1.2e-63	65.93	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
Q9S9Z2	3.1e-54	72.87	Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1	[more]
Q9M0Y5	4.0e-54	73.08	Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1	[more]

BLAST of CmaCh06G010880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61250.1	3.1e-94	61.13	myb domain protein 17	[more]
AT3G01140.1	6.8e-65	49.82	myb domain protein 106	[more]
AT5G15310.1	8.8e-65	65.93	myb domain protein 16	[more]
AT5G15310.2	8.8e-65	65.93	myb domain protein 16	[more]
AT5G16770.1	7.5e-56	73.64	myb domain protein 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 106..154 e-value: 1.7E-14 score: 64.1 coord: 52..103 e-value: 4.0E-10 score: 49.6
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 48..101 score: 11.114475
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 102..152 score: 10.41773
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 109..152 e-value: 1.48618E-10 score: 53.7334
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 55..101 e-value: 4.87594E-9 score: 49.4962
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 107..152 e-value: 1.5E-13 score: 50.7 coord: 53..101 e-value: 1.2E-12 score: 47.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 48..101 score: 17.1558
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 102..156 score: 24.793964
None	No IPR available	GENE3D	1.10.10.60		coord: 50..107 e-value: 4.9E-18 score: 66.8
None	No IPR available	GENE3D	1.10.10.60		coord: 109..156 e-value: 5.2E-21 score: 76.3
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 41..335
None	No IPR available	PANTHER	PTHR10641:SF1007	PROTEIN ODORANT1-LIKE	coord: 41..335
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 50..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G010880.1	CmaCh06G010880.1	mRNA