CmaCh06G010680 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G010680
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein PAIR1-like isoform X1
Location	Cma_Chr06: 7190219 .. 7194444 (-)
RNA-Seq Expression	CmaCh06G010680
Synteny	CmaCh06G010680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGCGATTATTGGTTGCGATTCGCGATCGTTCTTGTAGCTCTCAACCACGCCTGCAGTTCTGATTTAACAGTTGAAGAATTTTGACTTCTTAGTTTTCACGCGGAGAGTGTTTCAATCAAATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGGTATGCATCTCTTCTTATTTATTTTCAACGTTATCTGTTGTTTGAGTTGCAAAAATTCATGGAAAACAATGCGCAAGGAAGTTTAGATTGCAATGTTGTTAGTAATCAGTAGCCTGACAGTTTTTTGTTTCTTTATTTCCCGTGCTTCTAGCCGTTTATCGGGATCCGAATTCTGAAATATATGGATTTCATTTTGATTCTACCTATGTTCTTGATGTTTCATAAGGAATTTATTGTGTCGGAGCTTTTAAGAGATTTACATTTTCAATACATTTTACTGCAGACATCGAAATTTTTACTTACGCAGCTTAGTTCGATTTATTCATCAATTGAATTGACTTCATTTTTGTTGATACAATGTTAAGTTACTTTAGGTTTTGACTAAGAATAATCAGATGACTAAGGATTTGAAGTATTCGGACTATAATCTTGTCGTGCAAACTCGATCCAATCTCTGCAGTTTTACGTCATTATGTTCGTATCTGTTCCAGAGGAAACGCAAAATATTCAAGGAAAACATGAAGTTTTTTTTTTAATGTAATATAAAATGAAAATATTAATGGTTTTGATGGTTTTTAGCAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTCTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGATGAAGTCGTGACAAATGAACAGGTCAATCACTGTTTCTTCTCGGAATTCTCAATTCTCAATTCTCGCATATTACATCGTGATCACTATCTTTGAAAAAAAAAAATAGTTTACCCCTTATCAGTCCTTCGATTTTTCTTTATGGAGAATTTAGTAATATGCATCAAGGTCTTTGTATTATTTCCGTTTCCATGATGAAATTCCATCTTCACTTCTTGTTGTTCCAGCTTCAAGTCACCAGGTATTACAATTGTAAATAGGAGCCTTATGGGACTGTGTTCCATTTCAGGAGATGACCTTGTCTACTCCATCCCTTTTTAAAAACCTTTTTCCTACCAGTCTAGCCTTTTATGTGATTGCAGAGCCAAGAGGAATTATTTATCATGAAGGAAAAAAGAATTTTTCAACCAAGAAAAAAAAAAATCCCTTTGGAAACATCATAGCCACGATAACTTCGCATACCCTACTTACCTTGCAAAATGATTGACCACATAACTACACCTGATTTTTTACCAGTCATAACGGAAACAAAAAGTCGGCTGACATGATGAACTCAGTGAGCTGGCAGGTTTCGGTTATTCAGTTACACCTAAGCTTACGTTTATTTTACAATTTTATAATAACTAGCTTGCTACAATCAGTTACATAATAGGACTACTGAAAACACTCGTCATATCCACGTCATATCTTGAATTTGGCAGTTCAAATACCTCAAAATGTATCTCTCTCTATATATTACCTTTTTATAGATATAAGAGGGCCATGGTGAATGCTCTTAGTCTCTCATGCCATGAGGATCTGACTACGACATCGTATCAACTTGAAATAGAGTTTTATGATTGTAGTGTTCTTTCTGTTTTCATCTCTTATGACTTAACTTTGACGTACCATTCTGTTTGGCAGAGATTTAGCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCACTGCCGGACTATAAGTGTAAGTTCACTCTCTTGGACTTGTAGTATGGACACAAACTATTTAAATAAGTTTGATCTCACAGTATGGTATAACTGTACAACCTTTATAATAATCGTCCCTTCATTTGTGATAAATTTTAGCTTTCCTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTGAACAAATTTGGAAAGATCCTGGATTCTCTTCACGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGGTGAGCTTTGTAATCTCTCAAGCTGAAAAGTAAAATCCGAAGAGAAACTATGTACTAGTATTACTAGCTTGAAAAACACTTCCTTCGTTTAAACCTGATGTGTTTGTTTATCAAGTAGGAATAAGGTGATGAATATGCTTTACTTGAATTTCAATTCCTTCATAAAGTAGGATTAAAATTGCTATTTAAGAATGTGAAAGGGAAAGTGCCCGCATCAATAAGTAATTCTGACCTCAAAGTCATTGCTTTAAGGCCAAAAGCTTTGTCAAGCAATATGCTTATTTTTTTAAAAAAATTGCAGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAATCCATGGTAAATAGATCGATGCAATATTATACTGAGCATTAAGTTTGTTTATTGTTAATCACAATGTCTAATTTTTCCGAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTTAAGAAGGATGCATACCAAGATAGGCTACATGAGATTTCTGATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCATATTCACCCAAGAAATGAAGGTAAGTGCATGTCGTATCAAGTACTGCTATAAATGCACGATAAAAAGGATTCCCCCCCTAACTCTATTTCGATGAGATGAGGTGTTTATAAATTATGTATACATTCTTAAAAGTACCCCGCCTAAATGTTTGTTCTTAGATTGTTTTAACATTTCAACAAAATGCCACTTTGCAGTCACGTAACTTATTGGTTATTCTTCAATAACTTGTAGGCAATGGTCTGTACCTTGAAAAAACTCTTGCAGAAGTTTCCTCATCGCCCTATTGAATCTCCTGAGGTTCAGTTTCTTATTAGATATCGGTCAAATATTTTAAGCATTTGTTTCATTCTCAACTGTTCCTCATGGAAGTCTTTAATTGTAAATCTCAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATGTAATGAACCTCAGTTTTCTTAATAATTGGCTTGATTCCTAGTATATTCATGCATTTCATATTCAGACAGTTACCATTCTATCTTAAATGAATGAATTACTGATAATGGCCAATGGGTTTAAGATTGAATTGATGTATACTAATGTGGGAGTTGATCTTGTCCTTCTATTGCTCAAAAATAGAATTTCATGCAGTCTACGACATTTAGTGACCTGTAAAAGCTCGATGGTTTATTTCATTCCTGTATATTTTATGGTTCTGGTATACTGTAGTCTGGAAGTTCTCAAAGGAATTACTGTGCTATATTTGATTAACTTCTATCATTTGGCTTGTGGATATACGGTAAAAGAGAAGTTTTCACATTTTTCAGTAATGTTATCTTAATGTGGCATGAAAAACCATGGCAGCCACAATATGTTCTGGTGACCGTGATTGATTATGAATTACGGAATTATATGCATTGATCCTTTGTTCTTTAGCATCGTAAGTGATCTTACCTTTTCCACTTGATAACAGCCAATCTGCGTCTCCTGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAATTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACGTTTTGCACTAGTACTGTGGTGAAAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGGTAATGGTTTGAGTTTCATTATTTTTTCTGCCATCTCATTACATATATTACTGAAATTGTATGATTGTACTTTTTAAAGCAAATATTAACTTATTCCCTGATTATTGAATCCGAAATTTAAACTTATTATTCATTGAAGCGGGTAAAGATTTCTCCTTGAATATTAACAGCGCCTGGTGCTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA

mRNA sequence

ACAGCGATTATTGGTTGCGATTCGCGATCGTTCTTGTAGCTCTCAACCACGCCTGCAGTTCTGATTTAACAGTTGAAGAATTTTGACTTCTTAGTTTTCACGCGGAGAGTGTTTCAATCAAATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGCAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTCTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGATGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCACTGCCGGACTATAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTGAACAAATTTGGAAAGATCCTGGATTCTCTTCACGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTTAAGAAGGATGCATACCAAGATAGGCTACATGAGATTTCTGATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCATATTCACCCAAGAAATGAAGGCAATGGTCTGTACCTTGAAAAAACTCTTGCAGAAGTTTCCTCATCGCCCTATTGAATCTCCTGAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATCCAATCTGCGTCTCCTGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAATTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACGTTTTGCACTAGTACTGTGGTGAAAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGCGCCTGGTGCTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA

Coding sequence (CDS)

ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGCAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTCTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGATGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCACTGCCGGACTATAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTGAACAAATTTGGAAAGATCCTGGATTCTCTTCACGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTTAAGAAGGATGCATACCAAGATAGGCTACATGAGATTTCTGATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCATATTCACCCAAGAAATGAAGGCAATGGTCTGTACCTTGAAAAAACTCTTGCAGAAGTTTCCTCATCGCCCTATTGAATCTCCTGAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATCCAATCTGCGTCTCCTGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAATTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACGTTTTGCACTAGTACTGTGGTGAAAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGCGCCTGGTGCTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA

Protein sequence

MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPDYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQVQASQLKLKNDFISIFTQEMKAMVCTLKKLLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRATAVQTEELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDSWK

Homology

[Close]

BLAST of CmaCh06G010680 vs. ExPASy Swiss-Prot
Match: Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 9.9e-54
Identity = 153/434 (35.25%), Postives = 237/434 (54.61%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNS 60
           M++ INKACDL SISV PP   RS      Q + QLRSQ SQQSFSQG SS     G  S
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRS---AEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFS 60

Query: 61  QFSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSREECQLPLSKSSTSLTQRWKS 120
           Q +Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ RE+ QL  S+SS+ L++RW S
Sbjct: 61  QMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSS 120

Query: 121 TPLPDYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKV 180
             + + K Q+ EEL++R G +E SL++FG +LDS+  DI+  N+G K++ L+ E I QK+
Sbjct: 121 ASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKL 180

Query: 181 IVNSSLLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQVQASQL 240
            +  + LQ + KE  D KA+LDGG K I ++  KD  Q++L +I  +L+ + +QV+ +  
Sbjct: 181 TLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQ 240

Query: 241 KLKNDFISIFTQEMKAMVCTLKKLLQKFPH-RPIESPESTASLDVPQQKRRRCKIQSA-- 300
           K++ +    FT+E++     L  L    P  R   +P+  A  ++P+Q+ +  K+ ++  
Sbjct: 241 KIQREICHTFTREIQ----VLASLRTPEPRVRVPTAPQVKAKENLPEQRGQAAKVLTSLK 300

Query: 301 --SPDVCIRA-----------------------TAVQTE--------------------- 360
              P V + A                       T ++T+                     
Sbjct: 301 MPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYLS 360

Query: 361 ---ELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYRVIVDSDEE-IERSF 378
              ++G WK+VK  K     +  KK   +K +     R   E +  V++DSDEE I+  F
Sbjct: 361 PKIQVGCWKTVKPEK-----SNFKKRATRKPVKSESTRTQFE-QCSVVIDSDEEDIDGGF 420

[Close]

BLAST of CmaCh06G010680 vs. ExPASy Swiss-Prot
Match: Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.9e-29
Identity = 103/258 (39.92%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQ--SSRSNALTTGQQAPQLRSQP-------SQQSFSQGLS- 60
           M+LK+NKACD++SISVLPP+     S A  +G  A  + SQP       SQQSFSQG S 
Sbjct: 1   MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60

Query: 61  SLHGTNSQFSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFPPLSYS--REECQL 120
           SL  + SQFSQ S D+ +       T +QRF   D  +S K+ S  P  S S  REE QL
Sbjct: 61  SLLHSQSQFSQVSLDDNLLTLLPSPTRDQRFGLHD--DSSKRMSSLPASSASCAREESQL 120

Query: 121 PLSKSSTSLTQRWKSTPLPDYKCQV-GEELDRRLGTIENSLNKFGKILDSLHGDILHLNQ 180
            L+K  ++   RW  +       QV  E+++R+   + +S++K G ++DS+  D++ LN+
Sbjct: 121 QLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLNR 180

Query: 181 GMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKATLDGGFKLISDQLK-KDAYQDRLHE 238
            MK+ SLD   I QK+ V  S LQ + K  DD+KA      K   DQ    ++   +L+E
Sbjct: 181 AMKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGSKLNE 240

[Close]

BLAST of CmaCh06G010680 vs. TAIR 10
Match: AT1G01690.1 (putative recombination initiation defects 3 )

HSP 1 Score: 212.2 bits (539), Expect = 7.1e-55
Identity = 153/434 (35.25%), Postives = 237/434 (54.61%), Query Frame = 0


Query: 1   MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNS 60
           M++ INKACDL SISV PP   RS      Q + QLRSQ SQQSFSQG SS     G  S
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRS---AEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFS 60

Query: 61  QFSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSREECQLPLSKSSTSLTQRWKS 120
           Q +Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ RE+ QL  S+SS+ L++RW S
Sbjct: 61  QMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSS 120

Query: 121 TPLPDYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKV 180
             + + K Q+ EEL++R G +E SL++FG +LDS+  DI+  N+G K++ L+ E I QK+
Sbjct: 121 ASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKL 180

Query: 181 IVNSSLLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQVQASQL 240
            +  + LQ + KE  D KA+LDGG K I ++  KD  Q++L +I  +L+ + +QV+ +  
Sbjct: 181 TLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQ 240

Query: 241 KLKNDFISIFTQEMKAMVCTLKKLLQKFPH-RPIESPESTASLDVPQQKRRRCKIQSA-- 300
           K++ +    FT+E++     L  L    P  R   +P+  A  ++P+Q+ +  K+ ++  
Sbjct: 241 KIQREICHTFTREIQ----VLASLRTPEPRVRVPTAPQVKAKENLPEQRGQAAKVLTSLK 300

Query: 301 --SPDVCIRA-----------------------TAVQTE--------------------- 360
              P V + A                       T ++T+                     
Sbjct: 301 MPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYLS 360

Query: 361 ---ELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYRVIVDSDEE-IERSF 378
              ++G WK+VK  K     +  KK   +K +     R   E +  V++DSDEE I+  F
Sbjct: 361 PKIQVGCWKTVKPEK-----SNFKKRATRKPVKSESTRTQFE-QCSVVIDSDEEDIDGGF 420

The following BLAST results are available for this feature:

BLAST of CmaCh06G010680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWX5	9.9e-54	35.25	Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
Q75RY2	2.9e-29	39.92	Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1	[more]

BLAST of CmaCh06G010680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01690.1	7.1e-55	35.25	putative recombination initiation defects 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..52
None	No IPR available	PANTHER	PTHR37695:SF1	RECOMBINATION INITIATION DEFECTS 3-RELATED	coord: 1..373
IPR034546	Protein PAIR1	PANTHER	PTHR37695	RECOMBINATION INITIATION DEFECTS 3-RELATED	coord: 1..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G010680.1	CmaCh06G010680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051026	chiasma assembly
biological_process	GO:0009553	embryo sac development
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0048236	plant-type sporogenesis
biological_process	GO:0009555	pollen development
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle