CmaCh06G009920 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G009920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	S-acyltransferase
Location	Cma_Chr06: 6712722 .. 6716927 (+)
RNA-Seq Expression	CmaCh06G009920
Synteny	CmaCh06G009920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACGCTTGTTTTGCTGCCTAGTTTTATCGAAGTTCTTGATGAAGCTAAGAGTCTCTCTAGTTCTCCTGCCAATCTTGTGATCATTTTTTTAGTTCTTGGTAAGAAGCTCAGCTGGTTTGTAGTTTACGTTTCTATAAAATTGAACTTACCCTTTGATTTTCCAATACTTTTATGTGTTTGCACTTTGATCCAGTTCTTAATCTAGCCTTTGCACTCAAGTCTTTTTTGGTTCGTAGTTATGCATGCATCTCCCCTGATGAGCAATCCAGCATCAATTGAGGTAATGAACTTGAAGTCTTCACTTGCCTTTTATTTGTCTTCAATGTTCTGCTTTAGATTGGATTATCAATTTCCGTTCCTCAAGGTTCCTGCTGCTGATTGTTGCCTTAACCTCACTTATTCCTCAAATTCACTGTTTTATTAGTCTTTTCCCACAAGTGCAAGCTATCCTTTAGTTGGTGGAATTAGAGTAGCTGGATTATTTGCCACAGATAAGATAAAAATCATTCTTATAATACATTCGTTCAAACGTGCAATTTGACCATTGTAGTCTCAAATTTAAACAAACCATTATAGCAATTCAGTCGTTAATTATTGAGACCTCAATGCCATATTTAGCTCTTAATGTGATCATTCACTATTGCATTTTCGGGTTCACGAGTTGAGAAGAGCCGTTCAATGGAAGTATGACCTAGGCAAGAAAAAAAAATTATGAGGCGGTAATACTCCTTTGCATATGCCATCTTGTCCTATGAATAGGGAGAAGGAAAAAAAACACTACAATTTTATTCAGGGATAATATTTGAATTTAATGCTTCTGAATGCCTTTATTGCATCTTCTCGTGGAAATTTATCTCCCTATGTGGTATTATGACAGAAGCTAGTCTCATGTCTATCTATATCGTTCCCAGAGTTTATGCTATATTCTTTTTTTAGTCGTTCTGCACTGAGATGAGGAGTCATTTCCGAACATGCACCAGTTTTTTCACATATAGGAGCCTTTAATAATCTCATGAAATCTTCTTCTTCTTTTTTTTTTTTTTCTTTTTTTGTTCCTCGTAACTATGCTTAAACATGAAAGGCATTGCGTGTACTGATATTCATGTCTTGGGGGAACCAGAGTAATGTAGTTATTTTATGAACAATGATGCTTTTCTTTTTGAGTGATAACAATTTGTCAGCAAAAAATTTAAAAAAATTAAATAAAAAGTTAGTAAGCAACTGAATAAGAAAGTTGTGTACCGGTGATTGCGAATTCTTCTTGATTTAAAATTCCATTCAGTTTTCCAAGACCTTATTTCCATAAACATTAAAAAAAAAAAAACAAAAATTTCTCATGATATAGTAGTGACATGTAAATCTTGGTGAAATGATGACAACTAGGGCAGGCAGGTCCCCTTGAAACCAACTAGAACTGGCCTTAGAGCAGGCAAGTCTCCCTAGAATTGGTGGGGGTGGAGCCCCAATATCCCAGCCCCCATTTGCCCAAAAAGACAATGTAATGTAATCTTGTTCATCATCTAATTTCAGGTGGTCGATCATTATCCAAGGATGAGACTAAAGAAGAAGTTCTGTCCATGGAAGTGCAGAAACAGGAGATGGAAATAGAGATCAAAATGAAGATGGGAGCGATCATCAAAACAAGGCTAAAAGGTACCATCCATTGTTGCTTCTGTGATCTATGAAACCGAACCGCCCACCAACCCATCACGAACCCCCCTGATACACTTACCAAAACTAAAACTAGACATGTCCACACATCCTTGAGATCTCTGTTCTTCTGCCTCTTCTGCTCTCTCTCCCCCTTCATCCCAGCTTCAGTGTCTGCTCCCACCTGCAATTCTCTCGTGTGTGACATAGAATAGGAGGAAAAACTCACAAATGATCCATTAGAAGAAGAAGAAGAAGAAGATAGATCGGAGAGAAAACCCAATTAGCTTAGGAAAAAGACGTGCAGTTCTTGAAGATATTAGAGAGAAATAGAATAAGAAAGTCGCATTGAGTATAACGTCACGCGTGGCTTCCCAAAGTTGGTTTTGTCAATTTGAAGGAATGTAAATATAAATAAAAGAAGGATTGGCATTCATTGGCTGGGATCGATAATTGCGTAGCTTCTATCTGGGGTAGAGTTTGATTGATTTATTGCCTTAGATGACATTTAGTGCCGCGACACCCACCTGGCCACAATTCCTTTGTTTCTTCATTTTCATAACCTCTTTCATTATTGTTTCTTTCTTCTCTCCTCCCTTCTCATGCAAACCCAACTACAGCTTCTATTCAGAACATTAATCTTTAAGTATAGTCATAAATGAGCCTTTACATAAGACTAGTCTTATGAGTGTAACCGCCTCAACTCACTGCTAATATTGTTCATTTTGGCCTGTTACATATCATCTCAACCTCATGGTTTTAAGCGCGTCTACTAGAGAGAGATTTCCACACCCTTATAAGAAATGTTTCGTTCCCTTTTCCAACCGATGTGGGATCTCACAATCCACCCCTCTTGCTCACAATCTACCCCTCTTGGGAGTCTAGCATCCTCATTGGCTCACCGCTCAATATCTTGACTCTGATACCATTTGTAATAACTCAAACTCACAGCTAATAGATATTGTCTGCTTTGGCCTATTATGTATCGTCTGATTTTAAACGCGTCTACTAAAAAGAGGTTTCCACACTCTTATAAGGAATATTTCGTTCCCCTCTCCTTTGGCCTATTATGTATCGTCGTCAGCCTCATGATTTTAAACGCGTCTACTAAAAAGAGGTTTTCACACTCTTATAAGGAATATTTCGTTCCCCTCTCCAAGCGATGTTGACTATCAGATTTGAATCATCAGATTTGAATTTAGTTTCATTACTTTTTTTAATAACCTATTTAGTTACCATGTTCATCAGAAACTTTTATATTAGATTGGGGGTAATAGGAGGATTTAATTCAGGAAGTTGTTGAAGAAAATTGTAATAGCAGGCTGTTTTAAATTATATATGAAACTCTGTCAAATGCATCTGCACAAAAACACATTCATTGCAACTCAGCCATCCCTGGATTGTTAAATAAGTTAAAAGCCACTTGGTTTTTACTAGTATTTAGAAAAGGAAACAGCCCTACTTTTCCCAAAAAGCCCCCTTTGAGAGTCTGAGACACCCAATTAAAACTTGAACAAGGGAAGCCTAAAACACATCCAGACAAGACTGTCCCTTTATGCAGGCATGGAGAAGAACTGATGACAGCTCCTTTATTATACCAAATAAAATTACTAGCCGTGGAAATACAATAATGTTGTGAATGACACAACTGGGTTAGGTTGTTAGTATTATAATATTCCGAAGCTAAGCCTGCAGTTAAGTATGATTATAATCAATCATATTTTACTACTTCAATTGAATTTGAGTTAAGAAATTGGCCTGTTTCCTTCCCGTGTATCCTTCCCGTTCCCGTTTGACATAGTCAAATATAAGATTAGTTTAGTTCCACCGAACTAGTTAAAACATATATCTAAACCAAGAAATCAAAGGTTTGAATCCCCTTATTCTGAAGTCATTTTAGCTCGGGTTGAAACTCAAATTTGATTCGGGTAGATTTTCTTCTCATTTGAACAGATTTTTGGATCACATGGTGTGATAATGGAGCTGCCCAAGTAGAACTGTGATCTATGGAAGTGCAGAAAGTAAAGATAAGAACAGACATTATAACAAATATGGGTGCAATCATGAAAACAATGTCTATTTGTTGAATGAAACTGAAACTCCCACCAACCGAACACAAGCCTTCCCCATCATGCTTGCCACTGCCATTGAACCCTAAGTAGCCTTCACAGAATATGCAGATTCTCATTCTCTTCCCTTTCTCCTTCTTCCTTCATTGCTGATTCCCCTGCAAATCTCCATGTTTTATCCATCACAAAAAGCTCTTCAGAAGAACATATGGCTGAAAAGAAAACACTGAGAGATTGAGAGAGAACTATTACTGTAGAGGGTTAAAGGATTTGGTAAGTAATTGTTGACAAAATAGGATACAAACCCGGACATTTTATGTTAAAAAAATCATCATTAGCCCAATAAAATCAAACCAAAAGTCCAGTTATCTAGAAGACTAATTAGCCAACTCAACGAGTCCATTATCTAGAAGTTTCTAGATATCTAGATATTTTAAGAATATTTTAGAAGAAGATCAACTTGCGGTTTACATTGTATAGAT

mRNA sequence

ATGGATACGCTTGTTTTGCTGCCTAGTTTTATCGAAGTTCTTGATGAAGCTAAGAGTCTCTCTAGTTCTCCTGCCAATCTTGTGATCATTTTTTTAGTTCTTGTTCTTAATCTAGCCTTTGCACTCAAGTCTTTTTTGATTGGATTATCAATTTCCGTTCCTCAAGGTGGTCGATCATTATCCAAGGATGAGACTAAAGAAGAAGTTCTGTCCATGGAAGTGCAGAAACAGGAGATGGAAATAGAGATCAAAATGAAGATGGGAGCGATCATCAAAACAAGGCTAAAAGATTTTTGGATCACATGGTGTGATAATGGAGCTGCCCAAGTAGAACTGTGATCTATGGAAGTGCAGAAAGTAAAGATAAGAACAGACATTATAACAAATATGGGTGCAATCATGAAAACAATGTCTATTTGTTGAATGAAACTGAAACTCCCACCAACCGAACACAAGCCTTCCCCATCATGCTTGCCACTGCCATTGAACCCTAAGTAGCCTTCACAGAATATGCAGATTCTCATTCTCTTCCCTTTCTCCTTCTTCCTTCATTGCTGATTCCCCTGCAAATCTCCATGTTTTATCCATCACAAAAAGCTCTTCAGAAGAACATATGGCTGAAAAGAAAACACTGAGAGATTGAGAGAGAACTATTACTGTAGAGGGTTAAAGGATTTGGTAAGTAATTGTTGACAAAATAGGATACAAACCCGGACATTTTATGTTAAAAAAATCATCATTAGCCCAATAAAATCAAACCAAAAGTCCAGTTATCTAGAAGACTAATTAGCCAACTCAACGAGTCCATTATCTAGAAGTTTCTAGATATCTAGATATTTTAAGAATATTTTAGAAGAAGATCAACTTGCGGTTTACATTGTATAGAT

Coding sequence (CDS)

ATGGATACGCTTGTTTTGCTGCCTAGTTTTATCGAAGTTCTTGATGAAGCTAAGAGTCTCTCTAGTTCTCCTGCCAATCTTGTGATCATTTTTTTAGTTCTTGTTCTTAATCTAGCCTTTGCACTCAAGTCTTTTTTGATTGGATTATCAATTTCCGTTCCTCAAGGTGGTCGATCATTATCCAAGGATGAGACTAAAGAAGAAGTTCTGTCCATGGAAGTGCAGAAACAGGAGATGGAAATAGAGATCAAAATGAAGATGGGAGCGATCATCAAAACAAGGCTAAAAGATTTTTGGATCACATGGTGTGATAATGGAGCTGCCCAAGTAGAACTGTGA

Protein sequence

MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALKSFLIGLSISVPQGGRSLSKDETKEEVLSMEVQKQEMEIEIKMKMGAIIKTRLKDFWITWCDNGAAQVEL

Homology

[Close]

BLAST of CmaCh06G009920 vs. ExPASy TrEMBL
Match: A0A6J1EVJ2 (probable protein S-acyltransferase 12 OS=Cucurbita moschata OX=3662 GN=LOC111436087 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALKSF 46
          MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL  F
Sbjct: 44 MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALSLF 88

[Close]

BLAST of CmaCh06G009920 vs. ExPASy TrEMBL
Match: A0A6J1D150 (S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111016320 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 1   MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL 43
           MDTLVLLPSFI+  D+AKS SSSPANLVIIFL  VLNLAFAL
Sbjct: 184 MDTLVLLPSFIKFFDQAKSHSSSPANLVIIFLAFVLNLAFAL 225

[Close]

BLAST of CmaCh06G009920 vs. ExPASy TrEMBL
Match: A0A1S3AUL3 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103483147 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-06
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 1   MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL 43
           MDTLVLLPSFI+  DEAKS S SPANLVI+FL  VLNLAFAL
Sbjct: 184 MDTLVLLPSFIKFFDEAKSHSGSPANLVILFLAFVLNLAFAL 225

[Close]

BLAST of CmaCh06G009920 vs. ExPASy TrEMBL
Match: A0A5A7U3N8 (S-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00690 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-06
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 1   MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL 43
           MDTLVLLPSFI+  DEAKS S SPANLVI+FL  VLNLAFAL
Sbjct: 721 MDTLVLLPSFIKFFDEAKSHSGSPANLVILFLAFVLNLAFAL 762

[Close]

BLAST of CmaCh06G009920 vs. ExPASy TrEMBL
Match: A0A0A0L714 (S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G118230 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-06
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 1   MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL 43
           MDTLVLLPSFI+  DEAKS S SPANLVI+FL  VLNLAFAL
Sbjct: 184 MDTLVLLPSFIKFFDEAKSHSGSPANLVILFLAFVLNLAFAL 225

[Close]

BLAST of CmaCh06G009920 vs. NCBI nr
Match: KAG7028523.1 (hypothetical protein SDJN02_09704, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-12
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 52  SVPQGGRSLSKDETKEEVLSMEVQKQEMEIEIKMKMGAIIKTRLK 97
           S+P GGRSLSKDETKEEVLSMEVQKQEMEIEIKMKMGAIIKTRLK
Sbjct: 120 SIPSGGRSLSKDETKEEVLSMEVQKQEMEIEIKMKMGAIIKTRLK 164

[Close]

BLAST of CmaCh06G009920 vs. NCBI nr
Match: XP_022929890.1 (probable protein S-acyltransferase 12 [Cucurbita moschata])

HSP 1 Score: 75.9 bits (185), Expect = 2.5e-10
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALKSF 46
          MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL  F
Sbjct: 44 MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALSLF 88

[Close]

BLAST of CmaCh06G009920 vs. NCBI nr
Match: XP_023540253.1 (probable protein S-acyltransferase 12 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.3 bits (181), Expect = 7.3e-10
Identity = 42/45 (93.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 1  MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALKSF 46
          MDTLVLLPSFIEVLDEAKSLSSSPANLVIIF VLVLNLAFAL  F
Sbjct: 1  MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFFVLVLNLAFALSLF 45

[Close]

BLAST of CmaCh06G009920 vs. NCBI nr
Match: XP_023540254.1 (probable protein S-acyltransferase 12 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.3 bits (181), Expect = 7.3e-10
Identity = 42/45 (93.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 1  MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFALKSF 46
          MDTLVLLPSFIEVLDEAKSLSSSPANLVIIF VLVLNLAFAL  F
Sbjct: 1  MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFFVLVLNLAFALSLF 45

[Close]

BLAST of CmaCh06G009920 vs. NCBI nr
Match: XP_022147367.1 (probable protein S-acyltransferase 12 [Momordica charantia] >XP_022147368.1 probable protein S-acyltransferase 12 [Momordica charantia] >XP_022147369.1 probable protein S-acyltransferase 12 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 1   MDTLVLLPSFIEVLDEAKSLSSSPANLVIIFLVLVLNLAFAL 43
           MDTLVLLPSFI+  D+AKS SSSPANLVIIFL  VLNLAFAL
Sbjct: 184 MDTLVLLPSFIKFFDQAKSHSSSPANLVIIFLAFVLNLAFAL 225

The following BLAST results are available for this feature:

BLAST of CmaCh06G009920 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G009920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVJ2	1.2e-10	95.56	probable protein S-acyltransferase 12 OS=Cucurbita moschata OX=3662 GN=LOC111436...	[more]
A0A6J1D150	1.4e-06	83.33	S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111016320 PE=3 SV=1	[more]
A0A1S3AUL3	3.1e-06	80.95	S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103483147 PE=3 SV=1	[more]
A0A5A7U3N8	3.1e-06	80.95	S-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00...	[more]
A0A0A0L714	3.1e-06	80.95	S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G118230 PE=3 SV=1	[more]

BLAST of CmaCh06G009920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028523.1	2.7e-12	95.56	hypothetical protein SDJN02_09704, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022929890.1	2.5e-10	95.56	probable protein S-acyltransferase 12 [Cucurbita moschata]	[more]
XP_023540253.1	7.3e-10	93.33	probable protein S-acyltransferase 12 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023540254.1	7.3e-10	93.33	probable protein S-acyltransferase 12 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022147367.1	2.9e-06	83.33	probable protein S-acyltransferase 12 [Momordica charantia] >XP_022147368.1 prob...	[more]

BLAST of CmaCh06G009920 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G009920.1	CmaCh06G009920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018230	peptidyl-L-cysteine S-palmitoylation
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity