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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTAGTCTTCGCATCCAGCAACTTGGTGTGTGCAACTGTCTGTCTCTTGGTTGCAGAAAAGCTTGCCATTTCTTGGTCAGTATGATTATTCTATCCACTGCCATTGTTGGTAACAAACATGTGACTTGGCAATCTATTAGTACTCGAGAGTGGACGAAAGGACGGTCAGCAAAACAAGGGAGGCACATCCAGGGCTGA mRNA sequence ATGGGTAGTCTTCGCATCCAGCAACTTGGTGTGTGCAACTGTCTGTCTCTTGGTTGCAGAAAAGCTTGCCATTTCTTGGTCAGTATGATTATTCTATCCACTGCCATTGTTGGTAACAAACATGTGACTTGGCAATCTATTAGTACTCGAGAGTGGACGAAAGGACGGTCAGCAAAACAAGGGAGGCACATCCAGGGCTGA Coding sequence (CDS) ATGGGTAGTCTTCGCATCCAGCAACTTGGTGTGTGCAACTGTCTGTCTCTTGGTTGCAGAAAAGCTTGCCATTTCTTGGTCAGTATGATTATTCTATCCACTGCCATTGTTGGTAACAAACATGTGACTTGGCAATCTATTAGTACTCGAGAGTGGACGAAAGGACGGTCAGCAAAACAAGGGAGGCACATCCAGGGCTGA Protein sequence MGSLRIQQLGVCNCLSLGCRKACHFLVSMIILSTAIVGNKHVTWQSISTREWTKGRSAKQGRHIQG
Homology
BLAST of CmaCh06G008360 vs. NCBI nr
Match: KAG6596910.1 (hypothetical protein SDJN03_10090, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.9 bits (172), Expect = 4.8e-09 Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query: 29 MIILSTAIVGNKHVTWQSISTREWTK--GRSAKQGRHIQG 67
MIILSTAIVGNKHV WQSISTREW+K GRSAKQGRHIQG
Sbjct: 1 MIILSTAIVGNKHVIWQSISTREWSKDGGRSAKQGRHIQG 40
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6596910.1 | 4.8e-09 | 90.00 | hypothetical protein SDJN03_10090, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..19
score: 5.0 |
Relationships
The following mRNA feature(s) are a part of this gene:
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