CmaCh06G008150 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G008150
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr06: 4350139 .. 4351813 (+)
RNA-Seq ExpressionCmaCh06G008150
SyntenyCmaCh06G008150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATTCTCTCTTATCTCTAATACTCTGCAACTTAAGGTTTGTGTCCTGACATGGTGTGGTGATATTTGTGAATTTTAGGCAAAGGTCTCAAAAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTTGCAGTAAATCGTTTCCAACGTGATGATGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCTGATTTCTGTAACGAACAAGCAACCGATCCAAAGAAACGTACCGATTAATCCTGTATGTATGCTCTTCCTTTTCTGTGAGTTTATTATTGTTAGAACTCGAGAATTCCTGTTCAAGCAATCTAGTTTTCTTCCATAATAATATAACAAAGTTATTGCATATTGTAGGAACGACCCTCCACAGTAGCATGATAATGTCCACTTTGAGTATAAGCTCTCATGTTTTTTCAAAAGACCTTAAAACCAATGAAGATAATATCCCTTACTTATATACCATGATATTTTCCTTTATTAGCTAATGCGAGACTCGAACAATCAACAATTCTTAATAATCCTTCCCACGAACAAAGTAAACCATTGAGCCTCATCTGACGACTCCTTTTTCTTTGGAGCCCTCAAACAAATTACAACATTGAGTCTCCCCTTAAATAGTTATCTATCTGTCCAATACTATTCTAGACGGCTTCTCTTCACTAGAGCACATTGTTAGTCCAATAAAACTCAATCATGAATCTTCATCATGACGGCACTTTCGAGACTCACAACTTCTTTGTTTGACACTTGAGCCACTATGACTACACCTTCAAGATTCAGAGCTTCTTTATTCAACATTTGAGGATTCTAGTGACATAACTTAATTAGGGTATAGCTCTAATACCACTTATAGGAACAACCACCCTTCACAATGACATAATATTGTTAACTTTGAGCATAAACTCCCGTGATTTTGTTTTTGGTTTCCCTAAAAGGTTCCATACAAATAGAGAGAGTGTCTCCTAATTATATACCCATGATCTTCCCCCTAATTAGCCAATGCAAAACTCCAGCATTCCCAATAATCATCAACACACAACAATAATCTAACCCACCTAGTGAGAAAGTATGATAATCAATTTAGTTTTCTTCAACAATAATGTAACCCAACTATACACCAAATTCATCTGAACATCTCAAATTTGAATAGATATATTGCAGTAATATTTGTTCAAGTGGTCAAGTTTTGGATGTGCATCTCCATGGTCATTCGACCATAATTTTAAGTCAAAAACATGACAACTTGAAATAGTTACCAGTGTTGTAATACTATAGATGAGGAGATGATATCAAACCCAATCATTTCTCCTGTATATAACTTGTTTTGGAAGGATATAGCCTGGCATCTATATCATGTTTGTGACGAAGAATTAAAGTTTTCCTTTTTTGATAGCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCACAAGGCTTTGACGAGTTTTCAGCCAAAAAACAAGAGACAAAAGCAGAACCAAAGCAGCGGATCTACCAAGAATACTAA

mRNA sequence

ATGGCAAAGGTCTCAAAAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTTGCAGTAAATCGTTTCCAACGTGATGATGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCTGATTTCTGTAACGAACAAGCAACCGATCCAAAGAAACGTACCGATTAATCCTGTATGTATGCTCTTCCTTTTCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCACAAGGCTTTGACGAGTTTTCAGCCAAAAAACAAGAGACAAAAGCAGAACCAAAGCAGCGGATCTACCAAGAATACTAA

Coding sequence (CDS)

ATGGCAAAGGTCTCAAAAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTTGCAGTAAATCGTTTCCAACGTGATGATGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCTGATTTCTGTAACGAACAAGCAACCGATCCAAAGAAACGTACCGATTAATCCTGTATGTATGCTCTTCCTTTTCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTCACAAGGCTTTGACGAGTTTTCAGCCAAAAAACAAGAGACAAAAGCAGAACCAAAGCAGCGGATCTACCAAGAATACTAA

Protein sequence

MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVCMLFLFSRQSSCKAQGCQIYLLLRQPDSKVSQGFDEFSAKKQETKAEPKQRIYQEY
Homology
[Close]
BLAST of CmaCh06G008150 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 0 

Query: 2   AKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 61
           A VSKENKVLV+VY+E+QEPR+ VNR+QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 272 ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 331

Query: 62  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVC----------MLFLFSRQSSCK 121
           RLRKSA+SPASPY+ TPE I + NKQPI R++ IN VC            F  +RQS  K
Sbjct: 332 RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLDEEFKFAFSIARQSLWK 391

Query: 122 AQGCQIYLLLRQPDSKVSQGFDEFSAKKQ 141
           AQG QIY L RQPDSKV Q F +FS K++
Sbjct: 392 AQGPQIYKLFRQPDSKVLQSFGKFSTKER 420

[Close]
BLAST of CmaCh06G008150 vs. ExPASy TrEMBL
Match: A0A0A0L6R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-33
Identity = 76/102 (74.51%), Postives = 89/102 (87.25%), Query Frame = 0 

Query: 1   MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYS 60
           MA VSKENKVLV+VY+E+QEPR+ VNR+QRD+VNK VRNQWK++ ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVCMLF 103
           QRLRKSA+SPASPY+ TPE I + NKQPI R++ IN VC  F
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSF 102

[Close]
BLAST of CmaCh06G008150 vs. ExPASy TrEMBL
Match: A0A1S3BKH3 (uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 75/102 (73.53%), Postives = 88/102 (86.27%), Query Frame = 0 

Query: 1   MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYS 60
           MA VSKENKVLV+VY+E+QEPR+ VNR+QR +VNK VRNQWK++ ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVCMLF 103
           QRLRKSA+SPASPY+ TPE I + NKQPI R++ IN VC  F
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSF 102

[Close]
BLAST of CmaCh06G008150 vs. ExPASy TrEMBL
Match: A0A1S3BL45 (uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.0e-31
Identity = 72/96 (75.00%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 1  MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYS 60
          MA VSKENKVLV+VY+E+QEPR+ VNR+QR +VNK VRNQWK++ ANKGYNRRTELLKYS
Sbjct: 1  MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61 QRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPIN 97
          QRLRKSA+SPASPY+ TPE I + NKQPI R++ IN
Sbjct: 61 QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAIN 96

[Close]
BLAST of CmaCh06G008150 vs. ExPASy TrEMBL
Match: A0A1R3JN19 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05011 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.8e-04
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 0 

Query: 1   MAKVSKENKVLVSVYTERQEPRVAVNRFQRDD--VNKTVRNQWKKEI----ANKGYNRRT 60
           MA  SK   V+V+VY ERQ  +V+ N   R    ++ T++ +  +      A KGYNRR 
Sbjct: 1   MATYSKNKAVVVTVYVERQRRKVSSNHRNRHQHYLHHTIKQELVQHNHGGGAGKGYNRRA 60

Query: 61  ELLKYSQRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPIN 97
           ELL YS+RLR+SA+  A P     + +S T +QP   N+ +N
Sbjct: 61  ELLHYSRRLRESARLEALPKPLESKPVSST-EQPPSNNIVMN 101

[Close]
BLAST of CmaCh06G008150 vs. NCBI nr
Match: KAA0041046.1 (uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa] >TYK12056.1 uncharacterized protein E5676_scaffold1017G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 0 

Query: 2   AKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 61
           A VSKENKVLV+VY+E+QEPR+ VNR+QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 272 ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 331

Query: 62  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVC----------MLFLFSRQSSCK 121
           RLRKSA+SPASPY+ TPE I + NKQPI R++ IN VC            F  +RQS  K
Sbjct: 332 RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLDEEFKFAFSIARQSLWK 391

Query: 122 AQGCQIYLLLRQPDSKVSQGFDEFSAKKQ 141
           AQG QIY L RQPDSKV Q F +FS K++
Sbjct: 392 AQGPQIYKLFRQPDSKVLQSFGKFSTKER 420

[Close]
BLAST of CmaCh06G008150 vs. NCBI nr
Match: KAG7030163.1 (hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33
Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0 

Query: 2  AKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 61
          AKVS+ENKVLVSVYTERQEPRVAVNR QRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ
Sbjct: 5  AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 64

Query: 62 RLRKSAQSPASPYLPTPELISVTN 86
          RLRKSAQSPASPYLPTPE IS+ N
Sbjct: 65 RLRKSAQSPASPYLPTPEPISLVN 88

[Close]
BLAST of CmaCh06G008150 vs. NCBI nr
Match: XP_011650374.1 (uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 5.0e-33
Identity = 76/102 (74.51%), Postives = 89/102 (87.25%), Query Frame = 0 

Query: 1   MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYS 60
           MA VSKENKVLV+VY+E+QEPR+ VNR+QRD+VNK VRNQWK++ ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVCMLF 103
           QRLRKSA+SPASPY+ TPE I + NKQPI R++ IN VC  F
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSF 102

[Close]
BLAST of CmaCh06G008150 vs. NCBI nr
Match: XP_008448775.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-32
Identity = 75/102 (73.53%), Postives = 88/102 (86.27%), Query Frame = 0 

Query: 1   MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYS 60
           MA VSKENKVLV+VY+E+QEPR+ VNR+QR +VNK VRNQWK++ ANKGYNRRTELLKYS
Sbjct: 1   MATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61  QRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPINPVCMLF 103
           QRLRKSA+SPASPY+ TPE I + NKQPI R++ IN VC  F
Sbjct: 61  QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSF 102

[Close]
BLAST of CmaCh06G008150 vs. NCBI nr
Match: XP_011650375.1 (uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 hypothetical protein Csa_011805 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-31
Identity = 73/96 (76.04%), Postives = 86/96 (89.58%), Query Frame = 0 

Query: 1  MAKVSKENKVLVSVYTERQEPRVAVNRFQRDDVNKTVRNQWKKEIANKGYNRRTELLKYS 60
          MA VSKENKVLV+VY+E+QEPR+ VNR+QRD+VNK VRNQWK++ ANKGYNRRTELLKYS
Sbjct: 1  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYS 60

Query: 61 QRLRKSAQSPASPYLPTPELISVTNKQPIQRNVPIN 97
          QRLRKSA+SPASPY+ TPE I + NKQPI R++ IN
Sbjct: 61 QRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAIN 96

The following BLAST results are available for this feature:
BLAST of CmaCh06G008150 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G008150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TG761.4e-4165.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L6R02.4e-3374.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1[more]
A0A1S3BKH32.0e-3273.53uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BL455.0e-3175.00uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1R3JN196.8e-0439.22Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05011 PE=4 ... [more]
BLAST of CmaCh06G008150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041046.12.9e-4165.10uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa] >TYK1... [more]
KAG7030163.11.3e-3394.05hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_011650374.15.0e-3374.51uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus][more]
XP_008448775.14.2e-3273.53PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo][more]
XP_011650375.11.2e-3176.04uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 ... [more]
BLAST of CmaCh06G008150 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G008150.1CmaCh06G008150.1mRNA