CmaCh06G006420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G006420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Imidazole glycerol phosphate synthase hisHF, chloroplastic
Location	Cma_Chr06: 3156309 .. 3157001 (-)
RNA-Seq Expression	CmaCh06G006420
Synteny	CmaCh06G006420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCTATGGCGATGAAGACAACGTATGGAAATGTCCGAAACACCCTTCCAAACGGCGGAGGATCGGAATATGTCCTCTCTGCCTCCGTGACCGCCTCCTCACTCTCTGCCCTGACTGCGCCAACGTCCGTCCTTGCAACTGTTGTGTAACTACTACCACCACCACCACCTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCTCTCGCTTCTCCTCCGCCGACGTTGCCTCTCTCGGATCCGTTGGCCGCCTCTCGAATCTGATTGACGGCGAGCCGGCCTTTCGCCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTTCGATCGAGATCGCGACTCGTTTCAGATTCGGTTGACTGTTCGTCGTCTGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAGGAGTAAGAGGAGCGGCCATGACAGCGGAAGAACCGAGACAGCAGCGGAAATCGAATTCACGCGGAGAGCAAAGGAAGTAGCGGAAGTCGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCAAGATCAGTTGTGGTTTCCGATTCTAGCGGGAGATTCGTCCAGCCACCAGTGAAGGCTAGGACGTGGTACTTTCCGAGTCCGATCAAAGCTTTTCGGCAATCGAAGATTTCAAAGGCCGTTCTCACGGAACGGTCTCCGTTACACAGAGGTTGA

mRNA sequence

ATGGCGTTCTATGGCGATGAAGACAACGTATGGAAATGTCCGAAACACCCTTCCAAACGGCGGAGGATCGGAATATGTCCTCTCTGCCTCCGTGACCGCCTCCTCACTCTCTGCCCTGACTGCGCCAACGTCCGTCCTTGCAACTGTTGTGTAACTACTACCACCACCACCACCTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCTCTCGCTTCTCCTCCGCCGACGTTGCCTCTCTCGGATCCGTTGGCCGCCTCTCGAATCTGATTGACGGCGAGCCGGCCTTTCGCCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTTCGATCGAGATCGCGACTCGTTTCAGATTCGGTTGACTGTTCGTCGTCTGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAGGAGTAAGAGGAGCGGCCATGACAGCGGAAGAACCGAGACAGCAGCGGAAATCGAATTCACGCGGAGAGCAAAGGAAGTAGCGGAAGTCGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCAAGATCAGTTGTGGTTTCCGATTCTAGCGGGAGATTCGTCCAGCCACCAGTGAAGGCTAGGACGTGGTACTTTCCGAGTCCGATCAAAGCTTTTCGGCAATCGAAGATTTCAAAGGCCGTTCTCACGGAACGGTCTCCGTTACACAGAGGTTGA

Coding sequence (CDS)

ATGGCGTTCTATGGCGATGAAGACAACGTATGGAAATGTCCGAAACACCCTTCCAAACGGCGGAGGATCGGAATATGTCCTCTCTGCCTCCGTGACCGCCTCCTCACTCTCTGCCCTGACTGCGCCAACGTCCGTCCTTGCAACTGTTGTGTAACTACTACCACCACCACCACCTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCTCTCGCTTCTCCTCCGCCGACGTTGCCTCTCTCGGATCCGTTGGCCGCCTCTCGAATCTGATTGACGGCGAGCCGGCCTTTCGCCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTTCGATCGAGATCGCGACTCGTTTCAGATTCGGTTGACTGTTCGTCGTCTGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAGGAGTAAGAGGAGCGGCCATGACAGCGGAAGAACCGAGACAGCAGCGGAAATCGAATTCACGCGGAGAGCAAAGGAAGTAGCGGAAGTCGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCAAGATCAGTTGTGGTTTCCGATTCTAGCGGGAGATTCGTCCAGCCACCAGTGAAGGCTAGGACGTGGTACTTTCCGAGTCCGATCAAAGCTTTTCGGCAATCGAAGATTTCAAAGGCCGTTCTCACGGAACGGTCTCCGTTACACAGAGGTTGA

Protein sequence

MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDCSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRSRSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG

Homology

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BLAST of CmaCh06G006420 vs. ExPASy TrEMBL
Match: A0A6J1KTD6 (vitellogenin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498490 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.6e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS
Sbjct: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120
           SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC
Sbjct: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120

Query: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of CmaCh06G006420 vs. ExPASy TrEMBL
Match: A0A6J1E8Z1 (suppressor protein SRP40-like OS=Cucurbita moschata OX=3662 GN=LOC111431922 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 222/230 (96.52%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED+VWKC KHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS
Sbjct: 1   MAFYGDEDDVWKCLKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120
           SSSSSSSFSRFSSADV SLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS DC
Sbjct: 61  SSSSSSSFSRFSSADVTSLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSEDC 120

Query: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           RSVVVSDSSGRFV+PPVKA+TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of CmaCh06G006420 vs. ExPASy TrEMBL
Match: A0A6J1HN71 (uncharacterized protein LOC111465171 OS=Cucurbita maxima OX=3661 GN=LOC111465171 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 202/231 (87.45%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED+VWKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCC   TTTTTSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLISLCPDCANVRPCNCC--ATTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS-VD 120
           SSSSSSSFSRFSSAD+ASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR V+DS  D
Sbjct: 61  SSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDD 120

Query: 121 CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIR 180
           CSSSGNSARASSFWSIFRS++K+S  D GR E A E +F RRAKEVAEVEEAMRRTLMIR
Sbjct: 121 CSSSGNSARASSFWSIFRSKTKKS-RDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           SRSV VSDSSGRFV+ PVKA+ WYFPSPIKAFRQSK+SKAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVSKAVLTERSPLHRG 228

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BLAST of CmaCh06G006420 vs. ExPASy TrEMBL
Match: A0A6J1E664 (uncharacterized protein LOC111430968 OS=Cucurbita moschata OX=3662 GN=LOC111430968 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.1e-101
Identity = 202/231 (87.45%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED+VWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCC   TTTTTSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCC--ATTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS-VD 120
           SSSSSSSFSRFSSAD+ASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR V+DS  D
Sbjct: 61  SSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDD 120

Query: 121 CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIR 180
           CSSSGNSARASSFWSIFRS++K+S  D GR E A E +F RRAKEVAEVEEAMRRTLMIR
Sbjct: 121 CSSSGNSARASSFWSIFRSKTKKS-RDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           SRSV VSDSSGRFV+ PVKA+ WYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

[Close]

BLAST of CmaCh06G006420 vs. ExPASy TrEMBL
Match: A0A0A0L6G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009520 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.1e-96
Identity = 194/231 (83.98%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED++WKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCC TT TTTTSS
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS-VD 120
           SSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSR V+DS  D
Sbjct: 61  SSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSGDD 120

Query: 121 CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIR 180
           CSSSGNSAR SSFWSIF+S+SK+  +D GR E A EI+F RRAKEVAEVEEAMRR LMIR
Sbjct: 121 CSSSGNSARTSSFWSIFKSKSKKR-NDGGRMEAAVEIDFRRRAKEVAEVEEAMRRKLMIR 180

Query: 181 SRSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           SRSV V+DS GR V+PPVKA+TWYFPSPIKAFRQSK+ K VLTERSPLHRG
Sbjct: 181 SRSVAVADSGGRIVRPPVKAKTWYFPSPIKAFRQSKLPKPVLTERSPLHRG 225

[Close]

BLAST of CmaCh06G006420 vs. NCBI nr
Match: XP_023005527.1 (vitellogenin-1-like [Cucurbita maxima])

HSP 1 Score: 439.5 bits (1129), Expect = 1.8e-119
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS
Sbjct: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120
           SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC
Sbjct: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120

Query: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

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BLAST of CmaCh06G006420 vs. NCBI nr
Match: KAG6596728.1 (hypothetical protein SDJN03_09908, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428.3 bits (1100), Expect = 4.1e-116
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED+VWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120
           SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS DC
Sbjct: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSEDC 120

Query: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           RSVVVSDSSGRFV+PPVKA+TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of CmaCh06G006420 vs. NCBI nr
Match: KAG7028262.1 (hypothetical protein SDJN02_09443, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.4 bits (1095), Expect = 1.6e-115
Identity = 223/230 (96.96%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED+VWKCPKHPSKRRR GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRTGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120
           SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS DC
Sbjct: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSEDC 120

Query: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           RSVVVSDSSGRFV+PPVKA+TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of CmaCh06G006420 vs. NCBI nr
Match: XP_023540514.1 (suppressor protein SRP40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCV-TTTTTTTS 60
           MAFYGDED+VWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCV TTTTTTTS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTTS 60

Query: 61  SSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVD 120
           SSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS D
Sbjct: 61  SSSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSDD 120

Query: 121 CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIR 180
           CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIR
Sbjct: 121 CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           SRSVVVSDSSGRFV+PPVKA+TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 SRSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231

[Close]

BLAST of CmaCh06G006420 vs. NCBI nr
Match: XP_022924447.1 (suppressor protein SRP40-like [Cucurbita moschata])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 222/230 (96.52%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60
           MAFYGDED+VWKC KHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS
Sbjct: 1   MAFYGDEDDVWKCLKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120
           SSSSSSSFSRFSSADV SLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDS DC
Sbjct: 61  SSSSSSSFSRFSSADVTSLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSEDC 120

Query: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEF RR KEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           RSVVVSDSSGRFV+PPVKA+TWYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of CmaCh06G006420 vs. TAIR 10
Match: AT1G32690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-31
Identity = 97/235 (41.28%), Postives = 131/235 (55.74%), Query Frame = 0


Query: 6   DEDNVWKCPKHPSKRRRI---GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSS 65
           DED   +C KH SKR      G+CP CL +RL +LCPDCA+  PC+C      + + SSS
Sbjct: 2   DEDGFSQCSKHFSKRGYFSGGGVCPFCLHERLSSLCPDCAHDLPCSCSSRAAVSFSPSSS 61

Query: 66  SSSSSFSRFS---SADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVD 125
           SSSSSFS F+   S +++ +GSVGR+++LI+ EPAFRRS+S+ AIP       ++   +D
Sbjct: 62  SSSSSFSIFAGDISFNISGVGSVGRVASLIECEPAFRRSKSM-AIPI--KPDSVIDSGLD 121

Query: 126 CSSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIR 185
               G S + SSFW IF         + G T+ A                      +M +
Sbjct: 122 ---HGRSKKTSSFWRIFMG-------NRGDTKPA----------------------IMKK 181

Query: 186 SRSVVVSDSSGRFVQPPV----KARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
           SRSV V+   G F   PV    K + W FPSPIK FRQS++SK +  +RSPL+RG
Sbjct: 182 SRSVAVAGEFG-FSPVPVPATGKGKGWNFPSPIKVFRQSRVSKMIFQQRSPLYRG 200

[Close]

BLAST of CmaCh06G006420 vs. TAIR 10
Match: AT2G35200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32690.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-22
Identity = 80/226 (35.40%), Postives = 112/226 (49.56%), Query Frame = 0


Query: 9   NVW-KCPKHPSKRRRI-GICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSSSSSSSS 68
           +VW KC +H  +   + G+CP CL +RL +LCPDCA+  PC+C   T   + SS      
Sbjct: 18  SVWQKCSRHEGRFVCVAGVCPYCLHERLSSLCPDCAHDLPCSC---TPRASVSSRGEGDV 77

Query: 69  SFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDCSSSGNS 128
           SF+R        +GSVGR++NLI+ EPAFRRS S+    F  ++   + ++      G  
Sbjct: 78  SFAR--------IGSVGRVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPG-- 137

Query: 129 ARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRSRSVVVS 188
            R    W +FR          G  E   +I+  +               +M +S SV   
Sbjct: 138 -RGRWLWRLFR----------GNREEETKIKAAK---------------VMKKSNSVA-- 197

Query: 189 DSSGRFVQPPV--KARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 231
                F   PV  K   WYFPSPIK FRQS++SK +  +RSPL+RG
Sbjct: 198 -GEVLFSPTPVTSKGNGWYFPSPIKVFRQSRVSKMIFQQRSPLYRG 201

The following BLAST results are available for this feature:

BLAST of CmaCh06G006420 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G006420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTD6	8.6e-120	100.00	vitellogenin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498490 PE=4 SV=1	[more]
A0A6J1E8Z1	8.4e-115	96.52	suppressor protein SRP40-like OS=Cucurbita moschata OX=3662 GN=LOC111431922 PE=4...	[more]
A0A6J1HN71	1.8e-101	87.45	uncharacterized protein LOC111465171 OS=Cucurbita maxima OX=3661 GN=LOC111465171...	[more]
A0A6J1E664	3.1e-101	87.45	uncharacterized protein LOC111430968 OS=Cucurbita moschata OX=3662 GN=LOC1114309...	[more]
A0A0A0L6G5	5.1e-96	83.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009520 PE=4 SV=1	[more]

BLAST of CmaCh06G006420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005527.1	1.8e-119	100.00	vitellogenin-1-like [Cucurbita maxima]	[more]
KAG6596728.1	4.1e-116	97.39	hypothetical protein SDJN03_09908, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7028262.1	1.6e-115	96.96	hypothetical protein SDJN02_09443, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023540514.1	1.3e-114	96.97	suppressor protein SRP40-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924447.1	1.7e-114	96.52	suppressor protein SRP40-like [Cucurbita moschata]	[more]

BLAST of CmaCh06G006420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32690.1	4.3e-31	41.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35200.1	4.8e-22	35.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34197	OS04G0591300 PROTEIN	coord: 1..230
None	No IPR available	PANTHER	PTHR34197:SF2	OS04G0591300 PROTEIN	coord: 1..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G006420.1	CmaCh06G006420.1	mRNA