CmaCh06G005080 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G005080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr06: 2385397 .. 2385810 (+)
RNA-Seq Expression	CmaCh06G005080
Synteny	CmaCh06G005080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGGTTGAGGAAGCCTAGACAAGCTGAAAATCTGAGCCAGATACGGCGGAGGAGGTGGGGTCCTGATGATCCCGGAGAGGAAGACATGGGTTGAAGATACGCCCAAGCCGCTTGCTTCACGAGGCGGTTGCGGATCGAGATCTCAAAGCCCGAATTCGCTGCAGAGGCGGCGGTGGGAGAGCTCATGGAAGTCGGAGATGGCAAAATGTCTCTGAGAGAAGTGTAGGTAAGGGAGTGGGAGGAGGATTTAACCGGGAAGAGCTCGAAAGCCAATGGCGGCGATGCAGCTGAGCCGCCGGAGGACTTGGTGGCGGAGAAGGCGAAAAGGTTTAGTTTTGATGGCACAACGACGGGCACCGCGATGGAGTTTCTTCGGCGGAGATTCGGCGGTGGTGGGTATGGTTTTTGA

mRNA sequence

ATGTGCAGGTTGAGGAAGCCTAGACAAGCTGAAAATCTGAGCCAGATACGGCGGAGGAGGTGGGGTCCTGATGATCCCGGAGAGGAAGACATGGCCGCTTGCTTCACGAGGCGGTTGCGGATCGAGATCTCAAAGCCCGAATTCGCTGCAGAGGCGGCGGTGGGAGAGCTCATGGAAGTCGGAGATGGCAAAATGTCTCTGAGAGAAGTAAGGGAGTGGGAGGAGGATTTAACCGGGAAGAGCTCGAAAGCCAATGGCGGCGATGCAGCTGAGCCGCCGGAGGACTTGGTGGCGGAGAAGGCGAAAAGGTTTAGTTTTGATGGCACAACGACGGGCACCGCGATGGAGTTTCTTCGGCGGAGATTCGGCGGTGGTGGGTATGGTTTTTGA

Coding sequence (CDS)

ATGTGCAGGTTGAGGAAGCCTAGACAAGCTGAAAATCTGAGCCAGATACGGCGGAGGAGGTGGGGTCCTGATGATCCCGGAGAGGAAGACATGGCCGCTTGCTTCACGAGGCGGTTGCGGATCGAGATCTCAAAGCCCGAATTCGCTGCAGAGGCGGCGGTGGGAGAGCTCATGGAAGTCGGAGATGGCAAAATGTCTCTGAGAGAAGTAAGGGAGTGGGAGGAGGATTTAACCGGGAAGAGCTCGAAAGCCAATGGCGGCGATGCAGCTGAGCCGCCGGAGGACTTGGTGGCGGAGAAGGCGAAAAGGTTTAGTTTTGATGGCACAACGACGGGCACCGCGATGGAGTTTCTTCGGCGGAGATTCGGCGGTGGTGGGTATGGTTTTTGA

Protein sequence

MCRLRKPRQAENLSQIRRRRWGPDDPGEEDMAACFTRRLRIEISKPEFAAEAAVGELMEVGDGKMSLREVREWEEDLTGKSSKANGGDAAEPPEDLVAEKAKRFSFDGTTTGTAMEFLRRRFGGGGYGF

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh06G005080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G005080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G005080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G005080 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G005080.1	CmaCh06G005080.1	mRNA