
CmaCh06G004700 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTCACCGTCCTGATTCTTTTCTTCCTCCTCCGCCGCCATTGACGGCCCAGAAAGCTCCTGTACCGGCGGAGAAAATCGGAATCGAACAGGAACTGGAGTCTCTGGCTTCGAAAAAACGCTCGGAATCAGAAGTGCAGGAGGTCGCCGCGGGTAAGGAAATGCAAGTACAGACGACAACGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAAGGTGGACGGGAGAGGCTGAAGAGGCACCGGCGGGAGATGGGCGGCCGAGTCTGGATACCGGATATATGGGGGCAAGAGGAACTTCTGAAGGAGTGGATTGATTGCTCCGGCTTCGATGCTTGTTTATTTCCGACTGGAATCGGGTTGGCGAGGGCGGCGCTGGTTGAAGAAGGAAGAAGGGCCAACAATGGCGGATTCAGACTGGAGAACAGGTGCTGA ATGGAATCTCACCGTCCTGATTCTTTTCTTCCTCCTCCGCCGCCATTGACGGCCCAGAAAGCTCCTGTACCGGCGGAGAAAATCGGAATCGAACAGGAACTGGAGTCTCTGGCTTCGAAAAAACGCTCGGAATCAGAAGTGCAGGAGGTCGCCGCGGGTAAGGAAATGCAAGTACAGACGACAACGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAAGGTGGACGGGAGAGGCTGAAGAGGCACCGGCGGGAGATGGGCGGCCGAGTCTGGATACCGGATATATGGGGGCAAGAGGAACTTCTGAAGGAGTGGATTGATTGCTCCGGCTTCGATGCTTGTTTATTTCCGACTGGAATCGGGTTGGCGAGGGCGGCGCTGGTTGAAGAAGGAAGAAGGGCCAACAATGGCGGATTCAGACTGGAGAACAGGTGCTGA ATGGAATCTCACCGTCCTGATTCTTTTCTTCCTCCTCCGCCGCCATTGACGGCCCAGAAAGCTCCTGTACCGGCGGAGAAAATCGGAATCGAACAGGAACTGGAGTCTCTGGCTTCGAAAAAACGCTCGGAATCAGAAGTGCAGGAGGTCGCCGCGGGTAAGGAAATGCAAGTACAGACGACAACGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAAGGTGGACGGGAGAGGCTGAAGAGGCACCGGCGGGAGATGGGCGGCCGAGTCTGGATACCGGATATATGGGGGCAAGAGGAACTTCTGAAGGAGTGGATTGATTGCTCCGGCTTCGATGCTTGTTTATTTCCGACTGGAATCGGGTTGGCGAGGGCGGCGCTGGTTGAAGAAGGAAGAAGGGCCAACAATGGCGGATTCAGACTGGAGAACAGGTGCTGA MESHRPDSFLPPPPPLTAQKAPVPAEKIGIEQELESLASKKRSESEVQEVAAGKEMQVQTTTAAAAAEEEEEEEGGRERLKRHRREMGGRVWIPDIWGQEELLKEWIDCSGFDACLFPTGIGLARAALVEEGRRANNGGFRLENRC Homology
BLAST of CmaCh06G004700 vs. ExPASy Swiss-Prot
Match: Q9LXJ1 (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.3e-24 Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of CmaCh06G004700 vs. ExPASy Swiss-Prot
Match: Q9M280 (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08 Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of CmaCh06G004700 vs. ExPASy TrEMBL
Match: A0A6J1KWF3 (protein BIC1-like OS=Cucurbita maxima OX=3661 GN=LOC111498803 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.5e-74 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CmaCh06G004700 vs. ExPASy TrEMBL
Match: A0A6J1EGP6 (protein BIC1-like OS=Cucurbita moschata OX=3662 GN=LOC111434141 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69 Identity = 139/146 (95.21%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CmaCh06G004700 vs. ExPASy TrEMBL
Match: A0A0A0LAW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776900 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.5e-42 Identity = 101/147 (68.71%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of CmaCh06G004700 vs. ExPASy TrEMBL
Match: A0A5A7TR64 (Protein BIC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003850 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.5e-40 Identity = 97/143 (67.83%), Postives = 108/143 (75.52%), Query Frame = 0
BLAST of CmaCh06G004700 vs. ExPASy TrEMBL
Match: A0A1S3B6P7 (uncharacterized protein LOC103486607 OS=Cucumis melo OX=3656 GN=LOC103486607 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.5e-40 Identity = 97/143 (67.83%), Postives = 108/143 (75.52%), Query Frame = 0
BLAST of CmaCh06G004700 vs. NCBI nr
Match: XP_023005946.1 (protein BIC1-like [Cucurbita maxima]) HSP 1 Score: 287.0 bits (733), Expect = 9.4e-74 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CmaCh06G004700 vs. NCBI nr
Match: XP_022927272.1 (protein BIC1-like [Cucurbita moschata]) HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69 Identity = 139/146 (95.21%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CmaCh06G004700 vs. NCBI nr
Match: KAG7028105.1 (Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.4 bits (690), Expect = 9.1e-69 Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CmaCh06G004700 vs. NCBI nr
Match: KAG6596566.1 (Protein BIC1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68 Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CmaCh06G004700 vs. NCBI nr
Match: XP_023540183.1 (protein BIC1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259.2 bits (661), Expect = 2.1e-65 Identity = 134/146 (91.78%), Postives = 136/146 (93.15%), Query Frame = 0
BLAST of CmaCh06G004700 vs. TAIR 10
Match: AT3G52740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 111.3 bits (277), Expect = 6.6e-25 Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of CmaCh06G004700 vs. TAIR 10
Match: AT3G44450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 7.8e-10 Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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