CmaCh06G004670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G004670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein YIP
Location	Cma_Chr06: 2214370 .. 2215128 (+)
RNA-Seq Expression	CmaCh06G004670
Synteny	CmaCh06G004670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACGGTGAAGAAGGAATTCGCTGTACCGCCAGTGGTTTTCCCTTCTGGCGGCAACCCCAATCTTCAACAACGGCGGGTGGCGACGGCGCCATTTCAGCCTCCTCGGTCGACGGGCTCCAGCATTCCGTTTATGTCCTTTGACATCGGATCCGCTGCCGCTGCTTCAACATCCTCCGGTAGCATCTATGGTGGTTCTATTGTTGGCGGGTCTGTCCCTGGTGGTGCTAATTTCGAAGTCGAAGAACCCCTGCTCGACGAACTCGGGATCCATCCGGATCAAATCTGGAAAAAGACCAAGTCGATTCTGAATCCGTTCCGTGTCAGACCCGATGTGCACAAGGACTCGGACTTGTCTGGGCCGATTCTCCTTTACATGTTTTTCGGTCTCTTCCAGTTGCTCGCCGGTAAGATCCAATTCGGCGTGATTCTGGGATGGATTGTGGTTTCTTCCATCTTTCTATATGTTGTGTTCAATATGTTGGCCGGACGGAATGGTAATTTGAACCTTCACACATGTACTAGCGTGGTTGGGTACTGTATGTTGCCGGTTGTGGTTTTGTCGGCAGTGTCCTTGTTCCTACCGCAAGCTGGTATAATGAGATTCGCTGTCGCCGGAGTTTTTGTGTTGTGGGCGACGAGGATCTGTACGAGTCTCATGGTTTCTCTGGCTGATGGTGGAGATGAGCACCGCGGGTTGATAGCGTATGCTTGTTTTTTGATTTTCACTCTGTTTTCTCTGTTAGTTATATTTTAG

mRNA sequence

ATGGGGACGGTGAAGAAGGAATTCGCTGTACCGCCAGTGGTTTTCCCTTCTGGCGGCAACCCCAATCTTCAACAACGGCGGGTGGCGACGGCGCCATTTCAGCCTCCTCGGTCGACGGGCTCCAGCATTCCGTTTATGTCCTTTGACATCGGATCCGCTGCCGCTGCTTCAACATCCTCCGGTAGCATCTATGGTGGTTCTATTGTTGGCGGGTCTGTCCCTGGTGGTGCTAATTTCGAAGTCGAAGAACCCCTGCTCGACGAACTCGGGATCCATCCGGATCAAATCTGGAAAAAGACCAAGTCGATTCTGAATCCGTTCCGTGTCAGACCCGATGTGCACAAGGACTCGGACTTGTCTGGGCCGATTCTCCTTTACATGTTTTTCGGTCTCTTCCAGTTGCTCGCCGGTAAGATCCAATTCGGCGTGATTCTGGGATGGATTGTGGTTTCTTCCATCTTTCTATATGTTGTGTTCAATATGTTGGCCGGACGGAATGGTAATTTGAACCTTCACACATGTACTAGCGTGGTTGGGTACTGTATGTTGCCGGTTGTGGTTTTGTCGGCAGTGTCCTTGTTCCTACCGCAAGCTGGTATAATGAGATTCGCTGTCGCCGGAGTTTTTGTGTTGTGGGCGACGAGGATCTGTACGAGTCTCATGGTTTCTCTGGCTGATGGTGGAGATGAGCACCGCGGGTTGATAGCGTATGCTTGTTTTTTGATTTTCACTCTGTTTTCTCTGTTAGTTATATTTTAG

Coding sequence (CDS)

ATGGGGACGGTGAAGAAGGAATTCGCTGTACCGCCAGTGGTTTTCCCTTCTGGCGGCAACCCCAATCTTCAACAACGGCGGGTGGCGACGGCGCCATTTCAGCCTCCTCGGTCGACGGGCTCCAGCATTCCGTTTATGTCCTTTGACATCGGATCCGCTGCCGCTGCTTCAACATCCTCCGGTAGCATCTATGGTGGTTCTATTGTTGGCGGGTCTGTCCCTGGTGGTGCTAATTTCGAAGTCGAAGAACCCCTGCTCGACGAACTCGGGATCCATCCGGATCAAATCTGGAAAAAGACCAAGTCGATTCTGAATCCGTTCCGTGTCAGACCCGATGTGCACAAGGACTCGGACTTGTCTGGGCCGATTCTCCTTTACATGTTTTTCGGTCTCTTCCAGTTGCTCGCCGGTAAGATCCAATTCGGCGTGATTCTGGGATGGATTGTGGTTTCTTCCATCTTTCTATATGTTGTGTTCAATATGTTGGCCGGACGGAATGGTAATTTGAACCTTCACACATGTACTAGCGTGGTTGGGTACTGTATGTTGCCGGTTGTGGTTTTGTCGGCAGTGTCCTTGTTCCTACCGCAAGCTGGTATAATGAGATTCGCTGTCGCCGGAGTTTTTGTGTTGTGGGCGACGAGGATCTGTACGAGTCTCATGGTTTCTCTGGCTGATGGTGGAGATGAGCACCGCGGGTTGATAGCGTATGCTTGTTTTTTGATTTTCACTCTGTTTTCTCTGTTAGTTATATTTTAG

Protein sequence

MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSGSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF

Homology

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BLAST of CmaCh06G004670 vs. ExPASy Swiss-Prot
Match: Q66KA5 (Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 60/178 (33.71%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 76  GANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRP-DVHKDSDLSGPILLYMFFGLFQL 135
           G+ F+ E PLL+ELGI+ D IW+KT ++L+P +V   ++  ++DL+GP++  + FG   L
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLL 141

Query: 136 LAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLF 195
           LAGKIQFG + G   +  + +Y + N+++     ++    +SV+GYC+LP+++LS+ ++ 
Sbjct: 142 LAGKIQFGYVYGISAIGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSSFAVI 201

Query: 196 LPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 253
               GI+   +A + + W +   + + +S A   D  + L+AY C L++ +F+L+ +F
Sbjct: 202 FSLQGILGIVLAALIIGWCSFSASKIFIS-ALAMDGQQVLVAYPCALLYGVFALISVF 256

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BLAST of CmaCh06G004670 vs. ExPASy Swiss-Prot
Match: Q54QY3 (Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.4e-24
Identity = 72/201 (35.82%), Postives = 120/201 (59.70%), Query Frame = 0


Query: 57  STSSGSIYG--GSIVGGSVPGGA--NFEVEEPLLDELGIHPDQIWKKTKSILNPF-RVRP 116
           ST  G+ Y   G + GG   GG   +F+ E PLL+ELGI+ D I  KT S+LNP  ++  
Sbjct: 15  STPQGAYYDNTGRMGGGGGMGGPTDSFDNELPLLEELGINFDHIRSKTLSVLNPLKKIDS 74

Query: 117 DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNL 176
            +  D+DL GPIL  +  G   L++GKIQFG I G  ++  + +Y+V N+++ +   +++
Sbjct: 75  HIMDDTDLGGPILFGLLLGFSLLMSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDI 134

Query: 177 HTCTSVVGYCMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEH 236
           +   SV+GYC+LP++ LS  SL +   G++ + + G  ++W+T   + + V +    D+ 
Sbjct: 135 YRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAIVWSTYSASKMFVKVLSMIDQ- 194

Query: 237 RGLIAYACFLIFTLFSLLVIF 253
           R L+AY   L++T F+L+  F
Sbjct: 195 RILVAYPVGLLYTGFALITAF 212

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BLAST of CmaCh06G004670 vs. ExPASy Swiss-Prot
Match: Q7SXS2 (Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 60/178 (33.71%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 76  GANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRP-DVHKDSDLSGPILLYMFFGLFQL 135
           G+ F+ E PLL+ELGI+ D IW+KT ++L+P +V    +  ++DL+GP++  + FG   L
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 141

Query: 136 LAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLF 195
           LAGKIQFG + G   +  + +Y + N+++     ++    +SV+GYC+LP+++LS  ++ 
Sbjct: 142 LAGKIQFGYVYGISAMGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSTFAVI 201

Query: 196 LPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 253
               GI+   +A + + W +   + + +S A   D  + L+AY C L++ +F+L+ +F
Sbjct: 202 FSLQGILGIVLAALIIGWCSFSASKIFIS-ALAMDGQQLLVAYPCALLYGVFALISVF 256

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BLAST of CmaCh06G004670 vs. ExPASy Swiss-Prot
Match: A5D7K7 (Protein YIPF7 OS=Bos taurus OX=9913 GN=YIPF7 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-23
Identity = 65/177 (36.72%), Postives = 106/177 (59.89%), Query Frame = 0


Query: 78  NFEVEEPLLDELGIHPDQIWKKTKSILNPFR-VRPDVHKDSDLSGPILLYMFFGLFQLLA 137
           +FE E PLL+ELGI+ D IW+KT ++LNP +     +  ++DL+GPIL  M  G   LLA
Sbjct: 83  SFEEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCMALGATLLLA 142

Query: 138 GKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLP 197
           GK+QFG + G   +  + ++ + N+++  +  ++     SV+GYC+LP+V+LS+ ++F  
Sbjct: 143 GKVQFGYVYGMSAIGCLGIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSSCAIFFS 202

Query: 198 QAGIMRFAVAGVFVLWATRICTSLMVS-LADGGDEHRGLIAYACFLIFTLFSLLVIF 253
             G      A V + W +   + +  S LA  G +   LIAY C L++ LF+L+ +F
Sbjct: 203 LQGTFGTVSALVIIGWCSLSASKIFTSALAMEGQQL--LIAYPCALLYGLFALVTVF 255

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BLAST of CmaCh06G004670 vs. ExPASy Swiss-Prot
Match: Q8N8F6 (Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-22
Identity = 77/233 (33.05%), Postives = 123/233 (52.79%), Query Frame = 0


Query: 22  NLQQRRVATAPFQP-PRSTGSSIPFMSFDIGSAAAASTSSGSIYGGSIVGGSVPGGANFE 81
           NL   R   A  QP P S   S   MS           S+   Y  S      P   +F+
Sbjct: 57  NLYGSRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQS------PYIDSFD 116

Query: 82  VEEPLLDELGIHPDQIWKKTKSILNPFR-VRPDVHKDSDLSGPILLYMFFGLFQLLAGKI 141
            E PLL+ELGIH D IW+KT ++LNP + V   +  ++DL+GPIL  +  G   LLAGK+
Sbjct: 117 EEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLAGKV 176

Query: 142 QFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQAG 201
           QFG + G   +  + ++ + N+++  +  ++     SV+GYC+LP+V+LS  ++F    G
Sbjct: 177 QFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQG 236

Query: 202 IMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACFLIFTLFSLLVIF 253
           I     + V + W +   + + ++ A   +  + L+AY C +++ LF+LL IF
Sbjct: 237 IFGIMSSLVIIGWCSLSASKIFIA-ALHMEGQQLLVAYPCAILYGLFALLTIF 280

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BLAST of CmaCh06G004670 vs. ExPASy TrEMBL
Match: A0A6J1KY67 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111498633 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
           GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS
Sbjct: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

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BLAST of CmaCh06G004670 vs. ExPASy TrEMBL
Match: A0A6J1EK74 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111434052 PE=3 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.0e-134
Identity = 250/252 (99.21%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
           GSIYGGSIVGGSVPGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS
Sbjct: 61  GSIYGGSIVGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQAGI+RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQAGIIRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

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BLAST of CmaCh06G004670 vs. ExPASy TrEMBL
Match: A0A6J1CU38 (Protein YIP OS=Momordica charantia OX=3673 GN=LOC111014238 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130
Identity = 243/252 (96.43%), Postives = 246/252 (97.62%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
             IYGG I GGS+PGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRV+PDVHKDSDLS
Sbjct: 61  AGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQ GI+RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of CmaCh06G004670 vs. ExPASy TrEMBL
Match: A0A1S3B7C5 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103486599 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130
Identity = 244/253 (96.44%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDL 120
           SGSIYGG I GGS+PGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRV+PDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAG++RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLLRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

[Close]

BLAST of CmaCh06G004670 vs. ExPASy TrEMBL
Match: A0A0A0LGM5 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_3G776330 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.5e-130
Identity = 244/253 (96.44%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDL 120
           SGSIYGG I GGS+PGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRV+PDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAG++RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

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BLAST of CmaCh06G004670 vs. NCBI nr
Match: XP_023005720.1 (protein YIPF5 homolog [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 4.3e-135
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
           GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS
Sbjct: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of CmaCh06G004670 vs. NCBI nr
Match: XP_023538914.1 (protein YIPF5 homolog [Cucurbita pepo subsp. pepo] >KAG7028102.1 Protein YIPF5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.8 bits (1257), Expect = 2.8e-134
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
           GSIYGGSIVGGSVPGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS
Sbjct: 61  GSIYGGSIVGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of CmaCh06G004670 vs. NCBI nr
Match: XP_022927148.1 (protein YIPF5 homolog [Cucurbita moschata])

HSP 1 Score: 487.3 bits (1253), Expect = 8.2e-134
Identity = 250/252 (99.21%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
           GSIYGGSIVGGSVPGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS
Sbjct: 61  GSIYGGSIVGGSVPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQAGI+RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQAGIIRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of CmaCh06G004670 vs. NCBI nr
Match: XP_022144590.1 (protein YIPF5 homolog isoform X1 [Momordica charantia] >XP_022144591.1 protein YIPF5 homolog isoform X2 [Momordica charantia] >XP_022144592.1 protein YIPF5 homolog isoform X3 [Momordica charantia])

HSP 1 Score: 474.9 bits (1221), Expect = 4.2e-130
Identity = 243/252 (96.43%), Postives = 246/252 (97.62%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS 60

Query: 61  GSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 120
             IYGG I GGS+PGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRV+PDVHKDSDLS
Sbjct: 61  AGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDLS 120

Query: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180
           GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY
Sbjct: 121 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 180

Query: 181 CMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240
           CMLPVVVLSAVSLFLPQ GI+RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF
Sbjct: 181 CMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYACF 240

Query: 241 LIFTLFSLLVIF 253
           LIFTLFSLLVIF
Sbjct: 241 LIFTLFSLLVIF 252

[Close]

BLAST of CmaCh06G004670 vs. NCBI nr
Match: XP_008442831.1 (PREDICTED: protein YIPF5 homolog [Cucumis melo])

HSP 1 Score: 474.6 bits (1220), Expect = 5.5e-130
Identity = 244/253 (96.44%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTS 60
           MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTS
Sbjct: 1   MGTVKKEFAVPPVVFPSGGNPNLQQRRGVATAPFQPPRQTGSSIPFMSFDIGSAAAASTS 60

Query: 61  SGSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDL 120
           SGSIYGG I GGS+PGGANFE EEPLLDELGIHPDQIWKKTKSILNPFRV+PDVHKDSDL
Sbjct: 61  SGSIYGGPIGGGSIPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKPDVHKDSDL 120

Query: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180
           SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG
Sbjct: 121 SGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVG 180

Query: 181 YCMLPVVVLSAVSLFLPQAGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240
           YCMLPVVVLSAVSLFLPQAG++RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC
Sbjct: 181 YCMLPVVVLSAVSLFLPQAGLLRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 240

Query: 241 FLIFTLFSLLVIF 253
           FLIFTLFSLLVIF
Sbjct: 241 FLIFTLFSLLVIF 253

[Close]

BLAST of CmaCh06G004670 vs. TAIR 10
Match: AT2G36300.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 367.1 bits (941), Expect = 1.1e-101
Identity = 193/253 (76.28%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 6   KEFAVPPVVFPSGGN---PNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSGS 65
           K+FAVPPVVFPSGG+    N+QQRR    PFQPPR + S+IPFMSFDIGSAAA+S +   
Sbjct: 3   KDFAVPPVVFPSGGSSGGANVQQRRFPATPFQPPRPSSSAIPFMSFDIGSAAASSATPAG 62

Query: 66  IYGGSIVGGSVPGG--ANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKDSDLS 125
            +GG+I   S  GG  A+FE EEPLLDELGIHPDQIWKKT+SILNPFR+   VHKDSDLS
Sbjct: 63  PFGGTIASSSSFGGGSASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQAVHKDSDLS 122

Query: 126 GPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGY 185
           GPI LY+   LFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS+VGY
Sbjct: 123 GPIFLYLALCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSLVGY 182

Query: 186 CMLPVVVLSAVSLFLPQ-AGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAYAC 245
           C+LPVVVLSAVSLF+PQ AG +RF +A +FVLW+TR C++L+VSLADGG+EHRGLIAYAC
Sbjct: 183 CLLPVVVLSAVSLFVPQGAGPVRFVLAALFVLWSTRACSTLVVSLADGGEEHRGLIAYAC 242

Query: 246 FLIFTLFSLLVIF 253
           FLI+TLFSLLVIF
Sbjct: 243 FLIYTLFSLLVIF 255

[Close]

BLAST of CmaCh06G004670 vs. TAIR 10
Match: AT3G52760.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 338.6 bits (867), Expect = 4.4e-93
Identity = 182/257 (70.82%), Postives = 210/257 (81.71%), Query Frame = 0


Query: 6   KEFAVPPVVFPSGGN----PNLQQRRVATAPFQPPR--STGSSIPFMSFDIGSAAA---A 65
           K+F +PPVVFP+ G+     N+QQRRV TAP+QPPR  S  SSIPF+ F+IGSAA    A
Sbjct: 3   KDFPIPPVVFPTSGSSPATANVQQRRVPTAPYQPPRQSSASSSIPFIPFEIGSAAVSMPA 62

Query: 66  STSSGSIYGGSIVGGSVPGGANFEVEEPLLDELGIHPDQIWKKTKSILNPFRVRPDVHKD 125
               G+I   +  G  V   A+FE EEPLLDELGIHPDQIWKKT+SILNPFR+   VHKD
Sbjct: 63  GPFDGTIASSASFGRGV--SASFEDEEPLLDELGIHPDQIWKKTRSILNPFRINQTVHKD 122

Query: 126 SDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS 185
           SDLSGPI LY+   LFQLLAGKIQFGVILGW+VVSSIFLY+VFNMLAGRNGNLNLHTCTS
Sbjct: 123 SDLSGPIFLYLALCLFQLLAGKIQFGVILGWVVVSSIFLYIVFNMLAGRNGNLNLHTCTS 182

Query: 186 VVGYCMLPVVVLSAVSLFLPQ-AGIMRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLI 245
           +VGY +LPVV+LSAVSLF+PQ AG +RF +   FVLWATR C++L+VSLADGG+EHRGLI
Sbjct: 183 LVGYSLLPVVILSAVSLFVPQGAGPVRFVLGAAFVLWATRACSNLVVSLADGGEEHRGLI 242

Query: 246 AYACFLIFTLFSLLVIF 253
           +YACFLI+TLFSLLVIF
Sbjct: 243 SYACFLIYTLFSLLVIF 257

The following BLAST results are available for this feature:

BLAST of CmaCh06G004670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66KA5	4.2e-24	33.71	Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1	[more]
Q54QY3	9.4e-24	35.82	Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1	[more]
Q7SXS2	1.6e-23	33.71	Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1	[more]
A5D7K7	3.6e-23	36.72	Protein YIPF7 OS=Bos taurus OX=9913 GN=YIPF7 PE=2 SV=1	[more]
Q8N8F6	1.8e-22	33.05	Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2	[more]

BLAST of CmaCh06G004670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KY67	2.1e-135	100.00	Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111498633 PE=3 SV=1	[more]
A0A6J1EK74	4.0e-134	99.21	Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111434052 PE=3 SV=1	[more]
A0A6J1CU38	2.0e-130	96.43	Protein YIP OS=Momordica charantia OX=3673 GN=LOC111014238 PE=3 SV=1	[more]
A0A1S3B7C5	2.7e-130	96.44	Protein YIP OS=Cucumis melo OX=3656 GN=LOC103486599 PE=3 SV=1	[more]
A0A0A0LGM5	3.5e-130	96.44	Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_3G776330 PE=3 SV=1	[more]

BLAST of CmaCh06G004670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005720.1	4.3e-135	100.00	protein YIPF5 homolog [Cucurbita maxima]	[more]
XP_023538914.1	2.8e-134	99.60	protein YIPF5 homolog [Cucurbita pepo subsp. pepo] >KAG7028102.1 Protein YIPF5, ...	[more]
XP_022927148.1	8.2e-134	99.21	protein YIPF5 homolog [Cucurbita moschata]	[more]
XP_022144590.1	4.2e-130	96.43	protein YIPF5 homolog isoform X1 [Momordica charantia] >XP_022144591.1 protein Y...	[more]
XP_008442831.1	5.5e-130	96.44	PREDICTED: protein YIPF5 homolog [Cucumis melo]	[more]

BLAST of CmaCh06G004670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36300.1	1.1e-101	76.28	Integral membrane Yip1 family protein	[more]
AT3G52760.1	4.4e-93	70.82	Integral membrane Yip1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 125..249 e-value: 9.3E-9 score: 35.4
None	No IPR available	PANTHER	PTHR21236:SF21	PROTEIN YIPF	coord: 6..252
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 6..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G004670.1	CmaCh06G004670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0010506	regulation of autophagy
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0035658	Mon1-Ccz1 complex
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016020	membrane