CmaCh06G004540 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G004540
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor ERF024-like
Location	Cma_Chr06: 2105391 .. 2106363 (+)
RNA-Seq Expression	CmaCh06G004540
Synteny	CmaCh06G004540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCCTCCAATGGCTGCCACCCCAACCCTCATCAGAACTTAGTTCATCTCCAACTGGTCTGCACTCATCTCCTCCGCCATTTCCCCCTCCCTTTTTCTTCCTCCATAAATGCCTTCTCTCCATCTCTTCAACCCCACCGCCCCTCCCCTCCTCCTCCTCACTTTTCCCTTCAATTCACCTCCTCCATGGCTACTTCCGGCCGCCACCCCGTTTACCGCGGCGTTCGACGCCGCAACACAGGCAAATGGGTGTCGGAAATTCGCGAGCCCCGGAAGCCAAATCGGATTTGGTTGGGAACCTTCCCGACAGCTGAAATGGCGGCTGTGGCTTATGACGTTGCTGCCCTTGCTCTCAAGGGCCACGACACCCACCTCAATTTCCCCAATTCCGCGTCCTCTCTCCCTGTTCCTGCTTCACGTTCACCCTCTGATATTCAGGCTGCAGCCGCCTCTGCCGCCGCTGCGCTTGGTGCCGCAGCAGCCGCCATCGAGGCAAGAAGTGGTTTTCACGGTGGCCGTAGTAATGATCCAGGGGAAGTGCGAAATCATTTCATGGACGAGGACTTGATTTTTGATATGCCTAATATTCTAATGAATATGGCTGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATAATCATGGTGGTGATGACGACGGAGCCGATCATGGTACTGGAAACCTCTGGAATTTTTTCTAAGCAACAAATATACACATAGGGTTTTGTTTCTTCCGTCTTCTGGTTCTAAAAAGGAGGGATGTTATATAAGATCCCACCTCAATTGTAGAGGAGAACAAAACACTCTTTATAAGTATGTACAAACTTCTCCCTAGCAAATACATTTTTAAAAGATAGTATGTGTCTGATCAGCGGCCATTCACCACATTTGGTGAAGAAAGAAGCAAAAAGCAAAGCAAGTTGGAAGGTTAAGTTAGTTGAAGATAATGAGAAGTTTGATTCAAAGTGGACTTTC

mRNA sequence

GTCTCCTCCAATGGCTGCCACCCCAACCCTCATCAGAACTTAGTTCATCTCCAACTGGTCTGCACTCATCTCCTCCGCCATTTCCCCCTCCCTTTTTCTTCCTCCATAAATGCCTTCTCTCCATCTCTTCAACCCCACCGCCCCTCCCCTCCTCCTCCTCACTTTTCCCTTCAATTCACCTCCTCCATGGCTACTTCCGGCCGCCACCCCGTTTACCGCGGCGTTCGACGCCGCAACACAGGCAAATGGGTGTCGGAAATTCGCGAGCCCCGGAAGCCAAATCGGATTTGGTTGGGAACCTTCCCGACAGCTGAAATGGCGGCTGTGGCTTATGACGTTGCTGCCCTTGCTCTCAAGGGCCACGACACCCACCTCAATTTCCCCAATTCCGCGTCCTCTCTCCCTGTTCCTGCTTCACGTTCACCCTCTGATATTCAGGCTGCAGCCGCCTCTGCCGCCGCTGCGCTTGGTGCCGCAGCAGCCGCCATCGAGGCAAGAAGTGGTTTTCACGGTGGCCGTAGTAATGATCCAGGGGAAGTGCGAAATCATTTCATGGACGAGGACTTGATTTTTGATATGCCTAATATTCTAATGAATATGGCTGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATAATCATGGTGGTGATGACGACGGAGCCGATCATGATAATGAGAAGTTTGATTCAAAGTGGACTTTC

Coding sequence (CDS)

GTCTCCTCCAATGGCTGCCACCCCAACCCTCATCAGAACTTAGTTCATCTCCAACTGGTCTGCACTCATCTCCTCCGCCATTTCCCCCTCCCTTTTTCTTCCTCCATAAATGCCTTCTCTCCATCTCTTCAACCCCACCGCCCCTCCCCTCCTCCTCCTCACTTTTCCCTTCAATTCACCTCCTCCATGGCTACTTCCGGCCGCCACCCCGTTTACCGCGGCGTTCGACGCCGCAACACAGGCAAATGGGTGTCGGAAATTCGCGAGCCCCGGAAGCCAAATCGGATTTGGTTGGGAACCTTCCCGACAGCTGAAATGGCGGCTGTGGCTTATGACGTTGCTGCCCTTGCTCTCAAGGGCCACGACACCCACCTCAATTTCCCCAATTCCGCGTCCTCTCTCCCTGTTCCTGCTTCACGTTCACCCTCTGATATTCAGGCTGCAGCCGCCTCTGCCGCCGCTGCGCTTGGTGCCGCAGCAGCCGCCATCGAGGCAAGAAGTGGTTTTCACGGTGGCCGTAGTAATGATCCAGGGGAAGTGCGAAATCATTTCATGGACGAGGACTTGATTTTTGATATGCCTAATATTCTAATGAATATGGCTGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATAATCATGGTGGTGATGACGACGGAGCCGATCATGATAATGAGAAGTTTGATTCAAAGTGGACTTTC

Protein sequence

VSSNGCHPNPHQNLVHLQLVCTHLLRHFPLPFSSSINAFSPSLQPHRPSPPPPHFSLQFTSSMATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADHDNEKFDSKWTF

Homology

[Close]

BLAST of CmaCh06G004540 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47
Identity = 108/157 (68.79%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 61  SSMATSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALK 120
           +S    GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALK
Sbjct: 4   TSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALK 63

Query: 121 GHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAI------EARSGFHGGR 180
           G    LNFPNS SSLP P S SP+DIQAAAASAAAA GAA  AI         SG     
Sbjct: 64  GSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMN 123

Query: 181 SNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPR 211
           S+      N FMDEDL+FDMPN+LMNMAEGMLLSPPR
Sbjct: 124 SSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPR 160

[Close]

BLAST of CmaCh06G004540 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-34
Identity = 93/186 (50.00%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 61  SSMATSG-----RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAA 120
           SSMA++G     + PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA
Sbjct: 3   SSMASAGLGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAA 62

Query: 121 LALKGHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAA-----AIEARSGFH 180
           +ALKG +  LNFP S  S PVP S S +DI+AAAA+AAA  G         A E +S   
Sbjct: 63  MALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSS 122

Query: 181 GGRS------NDPGE---VRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGA 228
             R+      ND G        FMDE+ + +MPN+L NMAEGM+++PP +      DD  
Sbjct: 123 KSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSP 182

[Close]

BLAST of CmaCh06G004540 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.0e-33
Identity = 82/167 (49.10%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 68  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 127
           ++PVYRG+R R +GKWVSEIREP+K  R+WLGT+PT EMAA AYDVAALALKG DT LNF
Sbjct: 86  KNPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNF 145

Query: 128 PNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRNHFMDE 187
           P+S  S P+P S S + I+ AAA+AAA  GAA AA++          +        F+DE
Sbjct: 146 PDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTAESSTMGFVDE 205

Query: 188 DLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADHDNEKFDSKWTF 235
           + + +MP +L +MA+GM+++PP   +   DD   + D E   S W++
Sbjct: 206 EELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGE---SLWSY 248

[Close]

BLAST of CmaCh06G004540 vs. ExPASy Swiss-Prot
Match: Q9FJ90 (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-31
Identity = 92/204 (45.10%), Postives = 118/204 (57.84%), Query Frame = 0


Query: 40  SPSLQP---HRPSPPPPHFSLQFTSSMATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRI 99
           SP   P     PSP P   S    ++   SG+H ++RG+R RN GKWVSEIREPRK  RI
Sbjct: 30  SPQTSPGSSSSPSPRPSGGSPARRTATGLSGKHSIFRGIRLRN-GKWVSEIREPRKTTRI 89

Query: 100 WLGTFPTAEMAAVAYDVAALALKGHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAAL 159
           WLGT+P  EMAA AYDVAALALKG D  LNFP  A +   P S S +DI+AAA+ AA   
Sbjct: 90  WLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAAEMK 149

Query: 160 GAAAAAIE-ARSGFHGGRSNDPGEVRNH-----FMDEDLIFDMPNILMNMAEGMLLSPPR 219
                  E        G+  +  EV  +     FMDE+ + +MP +L  MAEGML+SPPR
Sbjct: 150 QPDQGGDEKVLEPVQPGKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPR 209

Query: 220 FNNHGGDDDGADHDNEKFDSKWTF 235
              H   +D +  +N + D+ W++
Sbjct: 210 MMIHPTMEDDSP-ENHEGDNLWSY 231

[Close]

BLAST of CmaCh06G004540 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30
Identity = 81/164 (49.39%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 68  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 127
           RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G    LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 128 PNSASSLPVPASRSPSDIQAAAASAAAAL-------GAAAAAIEARSGFHGGRSND-PGE 187
            +SA  L +P +  P +IQ AA+ AA A        G+  AA    +   G R  +   E
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 188 VRN---HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDG 221
            +N    +MD++ +  MPN   NMAEGMLL PP    +  D DG
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHNDFDG 213

[Close]

BLAST of CmaCh06G004540 vs. ExPASy TrEMBL
Match: A0A6J1L0H2 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111498736 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.9e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 63  MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 122
           MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 123 THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 182
           THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 120

Query: 183 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH 224
           HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH
Sbjct: 121 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH 161

[Close]

BLAST of CmaCh06G004540 vs. ExPASy TrEMBL
Match: A0A6J1G3I4 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111450440 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.3e-82
Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 63  MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 122
           MATSGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 123 THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 182
           THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEV N
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVGN 120

Query: 183 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH 224
           HFMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGDDDGADH
Sbjct: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADH 161

[Close]

BLAST of CmaCh06G004540 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.0e-63
Identity = 134/168 (79.76%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 64  ATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 123
           ++SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 124 HLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSG------------FHG 183
            LNFPNSASSLP+PASRSPSDIQAAAASAAAALGAAAAA+EAR+              +G
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSEDVMYG 122

Query: 184 GRSNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDD 220
            R     E+ N FMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGDD+
Sbjct: 123 ARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDN 170

[Close]

BLAST of CmaCh06G004540 vs. ExPASy TrEMBL
Match: A0A5A7TQS0 (Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003560 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 4.4e-63
Identity = 136/168 (80.95%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 64  ATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 123
           ++SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DT
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDT 62

Query: 124 HLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEAR--SGFHGGRSND----- 183
            LNFPNSASSLP+PASRSPSDIQAAAASAAAALGAAAAA+EAR  SG   G  +D     
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHSDDVVYE 122

Query: 184 -----PGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDD 220
                  E+ + FMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGD+D
Sbjct: 123 ARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDED 170

[Close]

BLAST of CmaCh06G004540 vs. ExPASy TrEMBL
Match: A0A1S3B634 (ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=LOC103486579 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 4.4e-63
Identity = 136/168 (80.95%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 64  ATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 123
           ++SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DT
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDT 62

Query: 124 HLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEAR--SGFHGGRSND----- 183
            LNFPNSASSLP+PASRSPSDIQAAAASAAAALGAAAAA+EAR  SG   G  +D     
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHSDDVVYE 122

Query: 184 -----PGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDD 220
                  E+ + FMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGD+D
Sbjct: 123 ARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDED 170

[Close]

BLAST of CmaCh06G004540 vs. NCBI nr
Match: XP_023005859.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita maxima])

HSP 1 Score: 317.8 bits (813), Expect = 8.0e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 63  MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 122
           MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 123 THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 182
           THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 120

Query: 183 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH 224
           HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH
Sbjct: 121 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH 161

[Close]

BLAST of CmaCh06G004540 vs. NCBI nr
Match: XP_023539533.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 8.8e-82
Identity = 161/172 (93.60%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 63  MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 122
           MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 123 THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 182
           THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEV N
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVGN 120

Query: 183 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADHDNEKFDSKWTF 235
           HFMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGDDD ADH  E     W F
Sbjct: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDRADHGTENL---WNF 169

[Close]

BLAST of CmaCh06G004540 vs. NCBI nr
Match: XP_022946339.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata] >KAG6596551.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028087.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314.3 bits (804), Expect = 8.8e-82
Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 63  MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 122
           MATSGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 123 THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVRN 182
           THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEV N
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVGN 120

Query: 183 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADH 224
           HFMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGDDDGADH
Sbjct: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADH 161

[Close]

BLAST of CmaCh06G004540 vs. NCBI nr
Match: XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 6.3e-64
Identity = 141/183 (77.05%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 64  ATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 123
           ++SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 124 HLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSG------------FHG 183
            LNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEAR+              +G
Sbjct: 63  ELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNSGSYRGTNSSDIVYG 122

Query: 184 GRSNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADHDNEKFDSK 235
           GR    G + N FMDEDLIFDMPN+LMNMAEGMLLSPPRFN HGGDD   DHD+    + 
Sbjct: 123 GRYGQDG-LGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGDD---DHDDGADQNL 181

[Close]

BLAST of CmaCh06G004540 vs. NCBI nr
Match: XP_004138009.1 (ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hypothetical protein Csa_000912 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 4.1e-63
Identity = 134/168 (79.76%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 64  ATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 123
           ++SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 124 HLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSG------------FHG 183
            LNFPNSASSLP+PASRSPSDIQAAAASAAAALGAAAAA+EAR+              +G
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSEDVMYG 122

Query: 184 GRSNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDD 220
            R     E+ N FMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGDD+
Sbjct: 123 ARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDN 170

[Close]

BLAST of CmaCh06G004540 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-48
Identity = 108/157 (68.79%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 61  SSMATSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALK 120
           +S    GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALK
Sbjct: 4   TSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALK 63

Query: 121 GHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAI------EARSGFHGGR 180
           G    LNFPNS SSLP P S SP+DIQAAAASAAAA GAA  AI         SG     
Sbjct: 64  GSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMN 123

Query: 181 SNDPGEVRNHFMDEDLIFDMPNILMNMAEGMLLSPPR 211
           S+      N FMDEDL+FDMPN+LMNMAEGMLLSPPR
Sbjct: 124 SSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPR 160

[Close]

BLAST of CmaCh06G004540 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 3.0e-35
Identity = 93/186 (50.00%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 61  SSMATSG-----RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAA 120
           SSMA++G     + PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA
Sbjct: 3   SSMASAGLGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAA 62

Query: 121 LALKGHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAA-----AIEARSGFH 180
           +ALKG +  LNFP S  S PVP S S +DI+AAAA+AAA  G         A E +S   
Sbjct: 63  MALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSS 122

Query: 181 GGRS------NDPGE---VRNHFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGA 228
             R+      ND G        FMDE+ + +MPN+L NMAEGM+++PP +      DD  
Sbjct: 123 KSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSP 182

[Close]

BLAST of CmaCh06G004540 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32
Identity = 92/204 (45.10%), Postives = 118/204 (57.84%), Query Frame = 0


Query: 40  SPSLQP---HRPSPPPPHFSLQFTSSMATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRI 99
           SP   P     PSP P   S    ++   SG+H ++RG+R RN GKWVSEIREPRK  RI
Sbjct: 30  SPQTSPGSSSSPSPRPSGGSPARRTATGLSGKHSIFRGIRLRN-GKWVSEIREPRKTTRI 89

Query: 100 WLGTFPTAEMAAVAYDVAALALKGHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAAL 159
           WLGT+P  EMAA AYDVAALALKG D  LNFP  A +   P S S +DI+AAA+ AA   
Sbjct: 90  WLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAAEMK 149

Query: 160 GAAAAAIE-ARSGFHGGRSNDPGEVRNH-----FMDEDLIFDMPNILMNMAEGMLLSPPR 219
                  E        G+  +  EV  +     FMDE+ + +MP +L  MAEGML+SPPR
Sbjct: 150 QPDQGGDEKVLEPVQPGKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPR 209

Query: 220 FNNHGGDDDGADHDNEKFDSKWTF 235
              H   +D +  +N + D+ W++
Sbjct: 210 MMIHPTMEDDSP-ENHEGDNLWSY 231

[Close]

BLAST of CmaCh06G004540 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-31
Identity = 81/164 (49.39%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 68  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 127
           RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G    LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 128 PNSASSLPVPASRSPSDIQAAAASAAAAL-------GAAAAAIEARSGFHGGRSND-PGE 187
            +SA  L +P +  P +IQ AA+ AA A        G+  AA    +   G R  +   E
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 188 VRN---HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDG 221
            +N    +MD++ +  MPN   NMAEGMLL PP    +  D DG
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHNDFDG 213

[Close]

BLAST of CmaCh06G004540 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 132.5 bits (332), Expect = 4.4e-31
Identity = 84/165 (50.91%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 68  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 127
           RHP+YRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G    LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 128 PNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSND--------PGE 187
            +SA  L +P S    DIQ AAA AA A        +  +  HG    +        P +
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAF--QDETCDTTTTNHGLDMEETMVEAIYTPEQ 163

Query: 188 VRNHF-MDEDLIFDMPNILMNMAEGMLLSPPRF---NNHGGDDDG 221
               F MDE+ +F MP +L NMAEGMLL PP     +N+ G+ DG
Sbjct: 164 SEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDG 206

The following BLAST results are available for this feature:

BLAST of CmaCh06G004540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJR0	1.5e-47	68.79	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	4.2e-34	50.00	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9CAN9	6.0e-33	49.10	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ90	5.6e-31	45.10	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ93	2.1e-30	49.39	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmaCh06G004540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0H2	3.9e-83	100.00	ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1G3I4	4.3e-82	98.14	ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36...	[more]
A0A0A0LBA2	2.0e-63	79.76	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=...	[more]
A0A5A7TQS0	4.4e-63	80.95	Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var...	[more]
A0A1S3B634	4.4e-63	80.95	ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of CmaCh06G004540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005859.1	8.0e-83	100.00	ethylene-responsive transcription factor ERF024-like [Cucurbita maxima]	[more]
XP_023539533.1	8.8e-82	93.60	ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo...	[more]
XP_022946339.1	8.8e-82	98.14	ethylene-responsive transcription factor ERF024-like [Cucurbita moschata] >KAG65...	[more]
XP_038906274.1	6.3e-64	77.05	ethylene-responsive transcription factor ERF024 [Benincasa hispida]	[more]
XP_004138009.1	4.1e-63	79.76	ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hy...	[more]

BLAST of CmaCh06G004540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36450.1	1.0e-48	68.79	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	3.0e-35	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G52020.1	4.0e-32	45.10	Integrase-type DNA-binding superfamily protein	[more]
AT5G51990.1	1.5e-31	49.39	C-repeat-binding factor 4	[more]
AT4G25490.1	4.4e-31	50.91	C-repeat/DRE binding factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 72..83 score: 65.15 coord: 94..110 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 71..134 e-value: 8.3E-33 score: 125.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 70..121 e-value: 5.6E-13 score: 48.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 71..128 score: 22.655378
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 72..130 e-value: 2.04893E-31 score: 108.128
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 71..129 e-value: 3.9E-24 score: 86.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..234
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 60..226
None	No IPR available	PANTHER	PTHR31985:SF121	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024	coord: 60..226
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 71..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G004540.1	CmaCh06G004540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity