
CmaCh06G004310 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAGTAGAGAGCAAAGGGATATGAACACTTTTCAACAATGCTGACTCTCACCCTCATTTGTAGCCCTAATTTTCAATTGCCCTAAATTTCACTTTCTCTCTCCTCTCTCTGTTTCTCTCTCTATTTGTAGCTTCAATTCCCACTCAAAACCCTCACTTCCATCTTCCACATTCGAAGCTAATCTGATCGGAAAATTTCACCGGAGACTGGAAAACATGGAGTGGGCCACCGGAAGTTTCAGACCCTTTGTTTCTCGAGCGCCGGAATCTTCATTTGGGTTTCTCTATAACTATAATCTTGAACAATATCAGGGTAATATTCAATGTTCTTGAGGGTTTTTTTTTTTTATTTTTTTATTTAATGAATTTGTTGTTTTGTTTATTTGATTTGTTCTAGTGGTTATAAACTTAAAAATAATGACACCCAGATCAGAAAAATCTGATCTTTCCACTTTTTTAGGTGTTTTTTTTTAAAAAAAAATTGTTCTTTTGTGTGTGTGTGTGTGTGTTTTTTCCGACAAGTAACTGTCACTAAACAAACGGATAATCGAAGATCTGAAACGGAGGTGGTTTTTTTAATGAATGTTTCATGTTTTTCGAACATGATTCTCTTGCAGATCCATGGAGGATATAATTAATTATATAAAATAGTTGAAAGATTTGTAGGGTTTTGTTAATCTTGTCTCTGGGGTTTTGCTTCCATGAGCAGGCATAGATGTGAAGCATTCAGCGATGGCGGGGGCGTCGGAGACGGTGCTGCAAGGGCTGGTTCCAGGGATGGACATGAACAGCTATGGAAATTTGGAGAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGACTCACTCGAACAAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGGAAGCAGAAGCTGGCCAAGGAGCTCGGTCTGCAGCCACGCCAGATCGCTGTTTGGTTCCAGAACCGCCGTGCGAGGTGGAAGGCAAAGCAACTCGAGCATCTCTACGACACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACATAAGCTTCAAGAGGAGGTATGCTTTTTTTCCCTTGATCTATGAAGTTTTAAAAAAAAAAAAATCAGATCTTTTTAAGATCTCAACTTAATAGTGAACTAAATTATGGGTTTTTTTTTTAATAGAGTAGGGTTGATTCAAGAAAATTATGAGCTTTTTGTAACAAATTTACTTGTAATGTATCTCATAAATCATTAATAAGTGCATTTTAATCATCAAAAGTACTTCAGCTTTAGAGAATTGAATTAGGGTTTATCTATACTTGGTTCGATCTCGAGTATATCTCATAAATCGTTCGTTTTTACACAAATTCATTGCATTTGAAATAGAAAGTTCGGTGCTTTTTTAGTCAATGTGGTTGGCAGTTTTGAACCGTTCGGATGTAGAAAAGATGAATATCGTCTTTTAACCCTGGCAGGTAATGAAACTGAAAAGCATGCTGAGAGAGCTTCAAACTGCGAGGAACCAAGTGTCGACGGTGTACACTGAATTGTCGGGGGAGGAGACGGTGGAGAGCACCTCGGTCGGAGCTGGCTGCTCAAGCAAGCCGAGTGCGGCGGCGGTGGCAGAAGCAGCAGCGAACCAATACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGAGTACAACCCCATGTCTCCAACCTTCTGGGGGACTCTCCCATCCTCTTATCATCCCCAGTAAACTTGTTTGCTTTGGTTTTTTTGTTTTTTTTTTTTTTTTTAATTTCATGAAAAAGTAAGATTGTGAAGTGAGAGGTTAAATTAGGGTTTTTTTAGAGAATAGTGTTGAAATTTGACAGTTTCTAATATCTGGGTCTTGGGATTTGTTTGGACAGTTCAGATCATACCACCTCAAATCTGTGTTTTTTATTTTATATATTAAGGGAAAAAAAATGGAGAATTTAATGAAAAAAAAATTATCGAGAAAGAGTTGAGGTTATATGATCTGAACTTTCTGTGCTGATTCAATGAGATCCCAGTTTAATAAATTTAATTTATGTGTTTGTG AAACAGTAGAGAGCAAAGGGATATGAACACTTTTCAACAATGCTGACTCTCACCCTCATTTGTAGCCCTAATTTTCAATTGCCCTAAATTTCACTTTCTCTCTCCTCTCTCTGTTTCTCTCTCTATTTGTAGCTTCAATTCCCACTCAAAACCCTCACTTCCATCTTCCACATTCGAAGCTAATCTGATCGGAAAATTTCACCGGAGACTGGAAAACATGGAGTGGGCCACCGGAAGTTTCAGACCCTTTGTTTCTCGAGCGCCGGAATCTTCATTTGGGTTTCTCTATAACTATAATCTTGAACAATATCAGGGCATAGATGTGAAGCATTCAGCGATGGCGGGGGCGTCGGAGACGGTGCTGCAAGGGCTGGTTCCAGGGATGGACATGAACAGCTATGGAAATTTGGAGAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGACTCACTCGAACAAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGGAAGCAGAAGCTGGCCAAGGAGCTCGGTCTGCAGCCACGCCAGATCGCTGTTTGGTTCCAGAACCGCCGTGCGAGGTGGAAGGCAAAGCAACTCGAGCATCTCTACGACACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACATAAGCTTCAAGAGGAGGTAATGAAACTGAAAAGCATGCTGAGAGAGCTTCAAACTGCGAGGAACCAAGTGTCGACGGTGTACACTGAATTGTCGGGGGAGGAGACGGTGGAGAGCACCTCGGTCGGAGCTGGCTGCTCAAGCAAGCCGAGTGCGGCGGCGGTGGCAGAAGCAGCAGCGAACCAATACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGAGTACAACCCCATGTCTCCAACCTTCTGGGGGACTCTCCCATCCTCTTATCATCCCCAGTAAACTTGTTTGCTTTGGTTTTTTTGTTTTTTTTTTTTTTTTTAATTTCATGAAAAAGTAAGATTGTGAAGTGAGAGGTTAAATTAGGGTTTTTTTAGAGAATAGTGTTGAAATTTGACAGTTTCTAATATCTGGGTCTTGGGATTTGTTTGGACAGTTCAGATCATACCACCTCAAATCTGTGTTTTTTATTTTATATATTAAGGGAAAAAAAATGGAGAATTTAATGAAAAAAAAATTATCGAGAAAGAGTTGAGGTTATATGATCTGAACTTTCTGTGCTGATTCAATGAGATCCCAGTTTAATAAATTTAATTTATGTGTTTGTG ATGGAGTGGGCCACCGGAAGTTTCAGACCCTTTGTTTCTCGAGCGCCGGAATCTTCATTTGGGTTTCTCTATAACTATAATCTTGAACAATATCAGGGCATAGATGTGAAGCATTCAGCGATGGCGGGGGCGTCGGAGACGGTGCTGCAAGGGCTGGTTCCAGGGATGGACATGAACAGCTATGGAAATTTGGAGAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGACTCACTCGAACAAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGGAAGCAGAAGCTGGCCAAGGAGCTCGGTCTGCAGCCACGCCAGATCGCTGTTTGGTTCCAGAACCGCCGTGCGAGGTGGAAGGCAAAGCAACTCGAGCATCTCTACGACACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACATAAGCTTCAAGAGGAGGTAATGAAACTGAAAAGCATGCTGAGAGAGCTTCAAACTGCGAGGAACCAAGTGTCGACGGTGTACACTGAATTGTCGGGGGAGGAGACGGTGGAGAGCACCTCGGTCGGAGCTGGCTGCTCAAGCAAGCCGAGTGCGGCGGCGGTGGCAGAAGCAGCAGCGAACCAATACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGAGTACAACCCCATGTCTCCAACCTTCTGGGGGACTCTCCCATCCTCTTATCATCCCCAGTAA MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVESTSVGAGCSSKPSAAAVAEAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ Homology
BLAST of CmaCh06G004310 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 4.1e-37 Identity = 104/199 (52.26%), Postives = 133/199 (66.83%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.3e-22 Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.3e-22 Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy TrEMBL
Match: A0A6J1L311 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC111498652 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 8.9e-128 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy TrEMBL
Match: A0A6J1FX30 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita moschata OX=3662 GN=LOC111449045 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.9e-127 Identity = 236/238 (99.16%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy TrEMBL
Match: A0A0A0LED8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.4e-119 Identity = 224/240 (93.33%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy TrEMBL
Match: A0A1S3B777 (homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486558 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.4e-119 Identity = 224/240 (93.33%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of CmaCh06G004310 vs. ExPASy TrEMBL
Match: A0A6J1F4W2 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita moschata OX=3662 GN=LOC111442145 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 8.4e-118 Identity = 220/239 (92.05%), Postives = 230/239 (96.23%), Query Frame = 0
BLAST of CmaCh06G004310 vs. NCBI nr
Match: XP_023005743.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita maxima]) HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh06G004310 vs. NCBI nr
Match: XP_023540702.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 9.1e-127 Identity = 237/238 (99.58%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh06G004310 vs. NCBI nr
Match: XP_022944654.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita moschata]) HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126 Identity = 236/238 (99.16%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh06G004310 vs. NCBI nr
Match: KAG6596528.1 (putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028062.1 putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126 Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0
BLAST of CmaCh06G004310 vs. NCBI nr
Match: XP_004138002.1 (homeobox-leucine zipper protein ATHB-22 isoform X2 [Cucumis sativus] >XP_008442781.1 PREDICTED: homeobox-leucine zipper protein ATHB-22-like isoform X2 [Cucumis melo]) HSP 1 Score: 437.2 bits (1123), Expect = 9.2e-119 Identity = 224/240 (93.33%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of CmaCh06G004310 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 ) HSP 1 Score: 156.4 bits (394), Expect = 2.9e-38 Identity = 104/199 (52.26%), Postives = 133/199 (66.83%), Query Frame = 0
BLAST of CmaCh06G004310 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 ) HSP 1 Score: 141.7 bits (356), Expect = 7.4e-34 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 0
BLAST of CmaCh06G004310 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 ) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21 Identity = 65/144 (45.14%), Postives = 91/144 (63.19%), Query Frame = 0
BLAST of CmaCh06G004310 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 ) HSP 1 Score: 100.5 bits (249), Expect = 1.9e-21 Identity = 60/127 (47.24%), Postives = 83/127 (65.35%), Query Frame = 0
BLAST of CmaCh06G004310 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 ) HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21 Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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