
CmaCh06G004010 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTTTCCTGGTATTTAATTTTCATCCACCTAGGGGTTTGGTGATGAATTTTGGCGGCGACCTTTGCGTCCATGGATATACCTATCCATCACATGGGGGGTTTAAGGCTCACAAACGCGGCTGATACTTTCTAATAATCCTTTGCCTCCCTCTTCGTCTTCTCTGCACTCCATCCATTTCTTCTCGATTATCCGCGTCTTTTCTCTTTCACCCATCTCACCCCCATCCAGATTTTTGAGTTCTAGAAGAATCCCACCAGCTCCGGCGAGGAAATATGTCTAAGAAAGGGGCCGCCGGTAGAACACCGGTTTTAAAGGACGCCCCATGGAGGGCTGCTGCCAAACCCACTCCGAAAATCCACCATGCTCCTGTGCTCCGCATTGCCCAATCCCCCTTTTCCAATTACGCCATCTCTGTAATGAAGGCGAGCTCTCTCATTATCTTTGTTCTTCTGTTGTTTTTTTTTTTTAATCTCTCTTTCTGGGTTTTGTTTGATTCTTTTGTTGGTTTTGGGGAAAATCTTTCTCTCTTTTTGCAGCATCCTGATCCGATTGGAAGTGGGTTGGCTATGGATGCTATCTTAGAATCGGCTGGGCCGGATTGTATTGTGCCTGGACAGACTGCACCTGTCAAACTACTTGGTCTCAAGGTATCCTTGTTTGATTTGTTTGGATTACTAGGATTTTGATTTCTAGAGGATTTCTTGGTTTTTCATACTCGAATTTTGTGTTTGAATTTGACTGAATTGATTATGTTAACTCCTTTAGTGGCAACCTGATGGTGTTTATGACTTTTGAGGCTATTGAAACGCCTTTTCTTTTAGCTGTTTGGAAGAATTACCAATTAAATGTTCCTTCCCAACATGTTTTTCAGTGGTTTCGAAATTTAGAAAAGCTTTTTTGATGTGTAACGAAAGGAAGAAAAAAAATTATGCTTAACACACTCAGAATCTTCTATCCTGATATAACAAGTTATCCACTGCGAAGCATGTTATCTCAGAATCTTAGCAATGACTCTTACCTGTCTTTTCTCTGTCACATGATCATGGCTCCATTATTTACCAGATTTAACTTTATAGCCAAGCTGAGTTTTGTTAATGGTTGGTTAGTGTTCGAATGTTAGAAGGTGGGAGGAGATGGAGGGGTTGAGGAGGCCATGTTTGTAGTGTGGTGGAATGGGCATTGTTATGAATACAATGCTTTGTTTTCTCAGTGAAAATGTAAACGACAAGTCTGAGTCGAGAAAACTCCGAAGAATCTCAGTTATTGATTGGTAATCCCTAGCTGTCCCTGAGATGAGAGAGATGAAGAATATTATAGGCCTCCCAACTCCACATTTACAATAGTGTAACAGTCTAAGTCCACCACTAGCAGATATTGTCTTTTTTGGCCCGTTACATATTTGTTAGCTTCATGGTTTTTAAAACGCCTCCGCTAGGGAGAGGTTTCCATCCTTTAAGGAATGTTTTGTTCTCCTCTCCAACCGTTGTGGGATCTCACAATCCACTCCTGTTGGGAGTCCAGCATCCTCACTGGCACACCGCTCGGTTACTGGCTCTAATACCATTTGTAATAGCCTAAGCCCACCGCTAGCAGATATTGTTCGTTTTGGTCCATTATGTATCGTCGTTAGCCTCACGGTTTTTAAAACGTGTCTGTTAGGGAGAAGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCACTCCAACCGATGTGAGATCTCACAAATAGGTGACAGGTAGGCAGTGTCAAGGGATGGGTAGTTGTTGTAGTTAAGGAGTTTCTATAGTGTAATCTCTAATTAGTAGTAACTTTAATTATAGGGTGGATGCCATTAGCATTGCCTTTATCACTGCTAAACTAAATCGTGACTTTGAGTTTATAAGAACTGCTTTTGCTGTGTATTTTGGTCTTATTATGCCACATGTGGACAGGTATGGCCCATTGATGTCGATCTTAAGTTTCTCGAGCCCGTTGGTAGAGAGCTTAAATTACTTGGAAAGGTAATTCACATAACTCTGCATATCTGTGTTTCATAAAGGTTGTTGGAAGTATACAGATTGATTTTACTTTCGAAAAAACATTATCGTCACTAGCCCGAACGTGGAGCTGGCCTTGGGTAGGAAAAACATACTCAAGAATTAGTGATACCATAAGAATGAGCCATGACCAATATGTAACGGCTCAAGCCCACTGTTAGCATATATTGTCTTCTTTGAGTTTTCTCTCTTGGGCTTCCCTTCAAAGTTTTTAAAACACGTCTGCCAAAGAGAGGTTTTCACACTCTTAAAAAGAATGCTTTGTTCCCCTTTGCAACTAAATGTGGAGCTGGCTTTGGGTAGACAAAACCTCCTCAAGAATTAGTGATATCACAAGAGTGAGCCATGACCCATAGATAACAGCCCAAGCCTACCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTATCTCTCAGACTTTCCCTCAAGGTTTTCAAAACGCGCCTGCTAGAGAAAGGTTTCCACACCCTTATAAAGAACGCTTTGTTCCCCTATTCAACCGATGTGGGATCTCACAATCCATCCCCCTTGGGGCTTAGCGTCCTTGCTGGCACTTGCTCTCTTCTCCAATCAATGTGGGACTCTGTGAGATCCCACACCGGTTGGGGAGAAGATCGAAGCACGTGGAAACCTCTCTCTAATAGATGCATTTTAAAAACCTTGAGGGGAAATTCAAAAATGGAAAAACATATTCTTGGAGTGTAAAATTATGAACGCAGAAGATTTTTTAGGCTCAAGACGTTAAGGAATCTGAGCTGCAGTTTTGCGCTCATTGTTGCTCCTAAATTCATATTTGGTTTTCCTTTGGTGTGCAGTTTATGGATGATGCGGTGAACCTGATGAACAAGTCATTTATAGATCGGTAG TTTATTTTCCTGGTATTTAATTTTCATCCACCTAGGGGTTTGGTGATGAATTTTGGCGGCGACCTTTGCGTCCATGGATATACCTATCCATCACATGGGGGGTTTAAGGCTCACAAACGCGGCTGATACTTTCTAATAATCCTTTGCCTCCCTCTTCGTCTTCTCTGCACTCCATCCATTTCTTCTCGATTATCCGCGTCTTTTCTCTTTCACCCATCTCACCCCCATCCAGATTTTTGAGTTCTAGAAGAATCCCACCAGCTCCGGCGAGGAAATATGTCTAAGAAAGGGGCCGCCGGTAGAACACCGGTTTTAAAGGACGCCCCATGGAGGGCTGCTGCCAAACCCACTCCGAAAATCCACCATGCTCCTGTGCTCCGCATTGCCCAATCCCCCTTTTCCAATTACGCCATCTCTGTAATGAAGCATCCTGATCCGATTGGAAGTGGGTTGGCTATGGATGCTATCTTAGAATCGGCTGGGCCGGATTGTATTGTGCCTGGACAGACTGCACCTGTCAAACTACTTGGTCTCAAGGTATGGCCCATTGATGTCGATCTTAAGTTTCTCGAGCCCGTTGGTAGAGAGCTTAAATTACTTGGAAAGTTTATGGATGATGCGGTGAACCTGATGAACAAGTCATTTATAGATCGGTAG ATGTCTAAGAAAGGGGCCGCCGGTAGAACACCGGTTTTAAAGGACGCCCCATGGAGGGCTGCTGCCAAACCCACTCCGAAAATCCACCATGCTCCTGTGCTCCGCATTGCCCAATCCCCCTTTTCCAATTACGCCATCTCTGTAATGAAGCATCCTGATCCGATTGGAAGTGGGTTGGCTATGGATGCTATCTTAGAATCGGCTGGGCCGGATTGTATTGTGCCTGGACAGACTGCACCTGTCAAACTACTTGGTCTCAAGGTATGGCCCATTGATGTCGATCTTAAGTTTCTCGAGCCCGTTGGTAGAGAGCTTAAATTACTTGGAAAGTTTATGGATGATGCGGTGAACCTGATGAACAAGTCATTTATAGATCGGTAG MSKKGAAGRTPVLKDAPWRAAAKPTPKIHHAPVLRIAQSPFSNYAISVMKHPDPIGSGLAMDAILESAGPDCIVPGQTAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGKFMDDAVNLMNKSFIDR Homology
BLAST of CmaCh06G004010 vs. ExPASy TrEMBL
Match: A0A6J1KUA5 (uncharacterized protein LOC111498726 OS=Cucurbita maxima OX=3661 GN=LOC111498726 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.3e-65 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmaCh06G004010 vs. ExPASy TrEMBL
Match: A0A6J1FEU8 (uncharacterized protein LOC111443428 OS=Cucurbita moschata OX=3662 GN=LOC111443428 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of CmaCh06G004010 vs. ExPASy TrEMBL
Match: A0A6J1CSK2 (uncharacterized protein LOC111014375 OS=Momordica charantia OX=3673 GN=LOC111014375 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55 Identity = 106/126 (84.13%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of CmaCh06G004010 vs. ExPASy TrEMBL
Match: A0A1S3B749 (uncharacterized protein LOC103486514 OS=Cucumis melo OX=3656 GN=LOC103486514 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54 Identity = 105/126 (83.33%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of CmaCh06G004010 vs. ExPASy TrEMBL
Match: A0A5A7TQX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002850 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51 Identity = 102/126 (80.95%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of CmaCh06G004010 vs. NCBI nr
Match: XP_023005847.1 (uncharacterized protein LOC111498726 [Cucurbita maxima]) HSP 1 Score: 257.3 bits (656), Expect = 6.9e-65 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmaCh06G004010 vs. NCBI nr
Match: XP_022937008.1 (uncharacterized protein LOC111443428 [Cucurbita moschata] >KAG6596492.1 hypothetical protein SDJN03_09672, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of CmaCh06G004010 vs. NCBI nr
Match: XP_023541001.1 (uncharacterized protein LOC111801211 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.5 bits (641), Expect = 3.8e-63 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of CmaCh06G004010 vs. NCBI nr
Match: KAG7028039.1 (hypothetical protein SDJN02_09219, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.0 bits (624), Expect = 3.5e-61 Identity = 122/126 (96.83%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of CmaCh06G004010 vs. NCBI nr
Match: XP_004137845.1 (uncharacterized protein LOC101222625 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 5.8e-56 Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of CmaCh06G004010 vs. TAIR 10
Match: AT2G36835.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 181.0 bits (458), Expect = 5.8e-46 Identity = 84/127 (66.14%), Postives = 109/127 (85.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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