CmaCh06G003940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G003940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr06: 1823713 .. 1825783 (+)
RNA-Seq Expression	CmaCh06G003940
Synteny	CmaCh06G003940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTTGGACCATCACTGCATCAGTGTTGATGGCGAAAACGACATCAGATGTTCGCACCTCGGTATCAAAATACTGGATGTCCTGGTCCAGTGCTGCTTCTAGGTACTTGATCCTCATCTTTGTGGATTGCCGCTCGCCGGTCCACATCCAACACGAAATCTCTGCACTCAGTTTCATATGTCATTTCAATTCACATATGAATGTAAAGAAAAAACCCAGAGAAGCCTAATGGACACTCTCAGTACCTGCCCAGGATGACGCCCATATCGCAGCTCCAACCACGAGAAAGTAGAATGCATACTGAAATTAGAGCAGAGGGATTTCAGTTGCTTAGATTTTTGACATTTACACTAGATTATTATCAACACATACACTTCGATTGTGTTTTGAGTCACAGTTCTACTTTACCTTCAAAACCTCCTGCATCATTTTATCCACATCATTGGCGTAAGACCCAAAAGAGTTAACAAGATCGGCGAAGAATCGAAGAAACAGAGGCAGAGAACAACCATGGACAAGGGCTCCGACCGACCCAATTGCCATCAAAACGTAATCCAACCCATCGGCGAATCTGAAGAGCTCCCCAAACCCAACGGCGGTGACAGCCTCAGGCTTCTCCCCACTGGTGCCACCGCCGTTTTCCTTCTTGGAACCACTAGTAGACTCCATATCTCCGTTTGTGGCTCTGCCAAATCCGTCTTGAGCCTCCTCTTTGGGTCTGAGGTCTTCAGGGTCTGTGTGTTTAGCTGTTGGGGCTGATGGGTTGTTGGTTATAAACGGGTCAAGAGGAGGAGGAGGAGGAGGAAGATCAGAAGAGACGAGCTCAAGGCCTTGCATTTCGGACCATTTCCACTGCTCAGTCGTCTTTATCTCTTCGGAATCTTGTGACATTGACGAAATTCCTCGCTTTATGAACAAAATTTCCCTTCTTTACCTTAATATTATTATTATTTCTTTTTTGCTGCTCACTCTATCAGGCTTTGTTTGAGCTCATGTTTTTGCCGCTCACTTTTTTCAACTCCATAACTTTTTCCCCCACACATCAATCTCTTTCCTTCTGCTACAGTTCGAGTAATTTTTTTTTTTTTAACTCTCTCTCAGTTGTCTCGGCTCTTCTTGTTCTTCCTGTTCTTCTTGTTGTTGTTCATCTTCTACTTATTGAATGCAAGTGTCAAAGAGACAACAACTGGTCTGCCTCTTTTTACCGTCAGATTGCTTTTCCAATTGTTCCCACTTTGCTTCTGTAAAAAAAAAACACAGAAAGTGACACATGTTAAGGAGACCCAGAGTGAGAAAAAAAGAAGGATTTTCCACCCGACAAATCACACTGTTTCAAAACTTGGAGATGGGTTTTGTAAAAAAAGAACTAAAATCTCATCTTTAATCCCAATAAGAAAAATAATTGCTTTGGTCATTGTCAAAACCTTATAATTGTTCTTCTTTTGTATTTTACTATATTTGTGGCTGATTTGGGTATCAGATTGATCTTTCATTGCAGGCTAATCATACCAGCAGTGAACTTGGAAAAGAGTCCCATATGAACGAACAGGTAAATTTTCTATTTCTACAATTGGCAAGCTATTTCTTTTGAGGTTAAAACTTAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTTTAAGTCCGTTAAAGAGGAATAATGGAGCTTCATAAACGTTTTTAGCTTCTGGCTTCTCGTGAGCTTCATAACTGCAGATTAATAATAATATGAATATTTTTATTTTTGCAGATTGGAAGGTTGACTGAAGAGAAAAACCAAAGCATAGTTGAAAATCTGATAGCGTATACACATTGAGTCTGCAAAAATTGTCAGAACTGCCGGAAAAAAGGTTTCCTTCTTACACACTATGCCTTGTTTGGATGCCCCATTGTTGAAGTAAAGTCTTAGGAAAGGAGGTGACATTTATAACTAAAACACATTAAAAAACAAGGGAACTTCATTCACTTTCTTTTATGCTTATTCATTTCAATTTCAAACACATTATTATTATTAGCATTTAGTACAATAAATTTTGGGAGGGTTGGTATCTTGGATGAAGAACTTAAAT

mRNA sequence

ATGGCGTCTTGGACCATCACTGCATCAGTGTTGATGGCGAAAACGACATCAGATGTTCGCACCTCGGTATCAAAATACTGGATGTCCTGGTCCAGTGCTGCTTCTAGACCCAAAAGAGTTAACAAGATCGGCGAAGAATCGAAGAAACAGAGGCAGAGAACAACCATGGACAAGGGCTCCGACCGACCCAATTGCCATCAAAACGTAATCCAACCCATCGGCGAATCTGAAGAGCTCCCCAAACCCAACGGCGGTGACAGCCTCAGGCTTCTCCCCACTGGTGCCACCGCCGTTTTCCTTCTTGGAACCACTAGTAGACTCCATATCTCCGTTTGTGGCTCTGCCAAATCCGTCTTGAGCCTCCTCTTTGGGTCTGAGGTCTTCAGGATTGATCTTTCATTGCAGGCTAATCATACCAGCAGTGAACTTGGAAAAGAGTCCCATATGAACGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTTTAAGTCCATTGGAAGGTTGACTGAAGAGAAAAACCAAAGCATAGTTGAAAATCTGATAGCGTATACACATTGAGTCTGCAAAAATTGTCAGAACTGCCGGAAAAAAGGTTTCCTTCTTACACACTATGCCTTGTTTGGATGCCCCATTGTTGAAGTAAAGTCTTAGGAAAGGAGGTGACATTTATAACTAAAACACATTAAAAAACAAGGGAACTTCATTCACTTTCTTTTATGCTTATTCATTTCAATTTCAAACACATTATTATTATTAGCATTTAGTACAATAAATTTTGGGAGGGTTGGTATCTTGGATGAAGAACTTAAAT

Coding sequence (CDS)

ATGGCGTCTTGGACCATCACTGCATCAGTGTTGATGGCGAAAACGACATCAGATGTTCGCACCTCGGTATCAAAATACTGGATGTCCTGGTCCAGTGCTGCTTCTAGACCCAAAAGAGTTAACAAGATCGGCGAAGAATCGAAGAAACAGAGGCAGAGAACAACCATGGACAAGGGCTCCGACCGACCCAATTGCCATCAAAACGTAATCCAACCCATCGGCGAATCTGAAGAGCTCCCCAAACCCAACGGCGGTGACAGCCTCAGGCTTCTCCCCACTGGTGCCACCGCCGTTTTCCTTCTTGGAACCACTAGTAGACTCCATATCTCCGTTTGTGGCTCTGCCAAATCCGTCTTGAGCCTCCTCTTTGGGTCTGAGGTCTTCAGGATTGATCTTTCATTGCAGGCTAATCATACCAGCAGTGAACTTGGAAAAGAGTCCCATATGAACGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTTTAAGTCCATTGGAAGGTTGACTGAAGAGAAAAACCAAAGCATAGTTGAAAATCTGATAGCGTATACACATTGA

Protein sequence

MASWTITASVLMAKTTSDVRTSVSKYWMSWSSAASRPKRVNKIGEESKKQRQRTTMDKGSDRPNCHQNVIQPIGESEELPKPNGGDSLRLLPTGATAVFLLGTTSRLHISVCGSAKSVLSLLFGSEVFRIDLSLQANHTSSELGKESHMNEQEEEEEEEEEFKSIGRLTEEKNQSIVENLIAYTH

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh06G003940 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G003940 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G003940 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G003940 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G003940.1	CmaCh06G003940.1	mRNA