CmaCh06G003360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G003360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type domain-containing protein
Location	Cma_Chr06: 1571748 .. 1572590 (+)
RNA-Seq Expression	CmaCh06G003360
Synteny	CmaCh06G003360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATTAAAACCCTCCACTGTAATCATGGCCGCCCTCTCCACACTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATTTTCTCCGACGTCCACACCAGCCGCCGCCGCCTCACCTTCATCCTCTCTTCTCCAACCCTCTTTTCCTTCACTCTCCGCCACCTCAATTCCCTTTCCCTTTCCCACAAATCTCTCCTCGTCGCCCGCTTCCTTCTATCAGCCCTCCGCCGCCTCTCCCGTCCCTTCCAGACGCCGTCGAAGTCCTTCCCCCACCACCCTTCTACCGCCTTCGTTACCCCTCGCGACCTCGACGCCGCCGTCCTCCTCCTCCTTCTCTGCGATGTACGCCAGCATAATCCGGCCGCCCTCGAAACTCCGATCACCCATTGGCGATCGACCCTCTGTCGAATCTACTCCGATTCCCTCTTGACGATCTCTGGCATCGCCACCGGCGGCTCCGGGGCCATTATTCCGTACATTGAGACTGTGGGCAGGTGCTGGAAATTCGTGGGATTTGTTGTGAGCCGCAACGGCGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCTGTCGCAGTGGTGGAGTTGCCGTCGGTGGCGGTGGGCGGCTGTATGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGAATGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAGCACTTATTCCATTGGCTCTGTATTCTGCCATGGTTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCCACAGATGATATCTTCGGCGAGATCCAACGGCTCTGGGACATCCTCGTCAAGGTGGGCTCCCCATCTGATGGAGATTAA

mRNA sequence

ATGGAAGAATTAAAACCCTCCACTGTAATCATGGCCGCCCTCTCCACACTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATTTTCTCCGACGTCCACACCAGCCGCCGCCGCCTCACCTTCATCCTCTCTTCTCCAACCCTCTTTTCCTTCACTCTCCGCCACCTCAATTCCCTTTCCCTTTCCCACAAATCTCTCCTCGTCGCCCGCTTCCTTCTATCAGCCCTCCGCCGCCTCTCCCGTCCCTTCCAGACGCCGTCGAAGTCCTTCCCCCACCACCCTTCTACCGCCTTCGTTACCCCTCGCGACCTCGACGCCGCCGTCCTCCTCCTCCTTCTCTGCGATGTACGCCAGCATAATCCGGCCGCCCTCGAAACTCCGATCACCCATTGGCGATCGACCCTCTGTCGAATCTACTCCGATTCCCTCTTGACGATCTCTGGCATCGCCACCGGCGGCTCCGGGGCCATTATTCCGTACATTGAGACTGTGGGCAGGTGCTGGAAATTCGTGGGATTTGTTGTGAGCCGCAACGGCGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCTGTCGCAGTGGTGGAGTTGCCGTCGGTGGCGGTGGGCGGCTGTATGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGAATGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAGCACTTATTCCATTGGCTCTGTATTCTGCCATGGTTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCCACAGATGATATCTTCGGCGAGATCCAACGGCTCTGGGACATCCTCGTCAAGGTGGGCTCCCCATCTGATGGAGATTAA

Coding sequence (CDS)

ATGGAAGAATTAAAACCCTCCACTGTAATCATGGCCGCCCTCTCCACACTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATTTTCTCCGACGTCCACACCAGCCGCCGCCGCCTCACCTTCATCCTCTCTTCTCCAACCCTCTTTTCCTTCACTCTCCGCCACCTCAATTCCCTTTCCCTTTCCCACAAATCTCTCCTCGTCGCCCGCTTCCTTCTATCAGCCCTCCGCCGCCTCTCCCGTCCCTTCCAGACGCCGTCGAAGTCCTTCCCCCACCACCCTTCTACCGCCTTCGTTACCCCTCGCGACCTCGACGCCGCCGTCCTCCTCCTCCTTCTCTGCGATGTACGCCAGCATAATCCGGCCGCCCTCGAAACTCCGATCACCCATTGGCGATCGACCCTCTGTCGAATCTACTCCGATTCCCTCTTGACGATCTCTGGCATCGCCACCGGCGGCTCCGGGGCCATTATTCCGTACATTGAGACTGTGGGCAGGTGCTGGAAATTCGTGGGATTTGTTGTGAGCCGCAACGGCGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCTGTCGCAGTGGTGGAGTTGCCGTCGGTGGCGGTGGGCGGCTGTATGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGAATGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAGCACTTATTCCATTGGCTCTGTATTCTGCCATGGTTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCCACAGATGATATCTTCGGCGAGATCCAACGGCTCTGGGACATCCTCGTCAAGGTGGGCTCCCCATCTGATGGAGATTAA

Protein sequence

MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQHNPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNGGKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD

Homology

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BLAST of CmaCh06G003360 vs. ExPASy Swiss-Prot
Match: Q8GXF8 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SGR9 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-68
Identity = 148/278 (53.24%), Postives = 182/278 (65.47%), Query Frame = 0


Query: 7   STVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLSHKS 66
           +T+IMA+LS LSP HL++L+HSI S  H  RRRL  +LSSPTLFS TLRHL SLSL  K+
Sbjct: 6   TTIIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRHLLSLSLPDKT 65

Query: 67  LLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTP-RDLDAAVLLLLLCDVRQHNPAAL 126
            L+A  LLS L     P     K   HH S A     RDLDA VLLL LC+  Q +P  L
Sbjct: 66  HLIANHLLSLL----HPLLIHRK---HHSSYAVTMKLRDLDAVVLLLFLCETHQLHPDVL 125

Query: 127 ETPITHWRSTLCRIYSDSLLT-ISGIATGGSGAIIPYIETVGRCWKFVGFV-----VSRN 186
           E    +WR  L   YS+++L+  SG+ T  +G ++PYIET+ RC +FV  +     + R 
Sbjct: 126 EASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPYIETLVRCKRFVDIMGGYNHLRRR 185

Query: 187 GGKARREVAASPVAVVELPSVAVGGCMA-----VECVICKEEMNEGRDACQLPCEHLFHW 246
             K   +V A+  AVV L +V V    A     VECVICKEEM+EGRD C++PC+H FHW
Sbjct: 186 DQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEMSEGRDVCEMPCQHFFHW 245

Query: 247 LCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVK 273
            CILPWL K+NTCP CRFQLPTDD+F EIQRLW+ILVK
Sbjct: 246 KCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

[Close]

BLAST of CmaCh06G003360 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.5e-14
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 189 ASPVAVVELPSVAVGGCMAV----ECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKR 248
           AS  A+  LP+V V   M      +C +C +E  +G D  Q+PC+H+FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 249 NTCPCCRFQLPTDD 259
           N+CP CRF+LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

[Close]

BLAST of CmaCh06G003360 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 189 ASPVAVVELPSVAVGGCMA-VECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTC 248
           A+   V  LP   + G  A ++C +C  E  E   A ++PC HLFH  CILPWL K N+C
Sbjct: 54  AAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSC 113

Query: 249 PCCRFQLPTDD 259
           P CR++LPTDD
Sbjct: 114 PLCRYELPTDD 124

[Close]

BLAST of CmaCh06G003360 vs. ExPASy Swiss-Prot
Match: Q3T0W3 (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.7e-13
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 189 ASPVAVVELPSVAVGGCMA-VECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTC 248
           A+  AV  LP   + G  A ++C +C  E  E   A ++PC HLFH  CILPWL K N+C
Sbjct: 54  AAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSC 113

Query: 249 PCCRFQLPTDD 259
           P CR +LPTDD
Sbjct: 114 PLCRHELPTDD 124

[Close]

BLAST of CmaCh06G003360 vs. ExPASy Swiss-Prot
Match: Q6GPV5 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.2e-13
Identity = 38/72 (52.78%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 189 ASPVAVVELPSVAV---GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRN 248
           AS   V  LP V V       A++C +C  E  EG    QLPCEHLFH  CILPWL K N
Sbjct: 55  ASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTN 114

Query: 249 TCPCCRFQLPTD 258
           +CP CR +LPTD
Sbjct: 115 SCPLCRHELPTD 126

[Close]

BLAST of CmaCh06G003360 vs. ExPASy TrEMBL
Match: A0A6J1KTZ6 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita maxima OX=3661 GN=LOC111498644 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.2e-159
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH
Sbjct: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG
Sbjct: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW
Sbjct: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 280

[Close]

BLAST of CmaCh06G003360 vs. ExPASy TrEMBL
Match: A0A6J1F6V7 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita moschata OX=3662 GN=LOC111442657 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 272/280 (97.14%), Postives = 274/280 (97.86%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEELKPSTVIMAALSTLS PHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSSPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLL+ARFLLSALRRLSRPFQTPSKSFPHHPSTA VTPRDLDAAVLLLLLCDVRQH
Sbjct: 61  SLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETPIT WRSTLCRIYSDSLLTISGIATGG+GA IPYIETV RCWKFVGFVVSRNG
Sbjct: 121 NPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNG 180

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW
Sbjct: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS SDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 280

[Close]

BLAST of CmaCh06G003360 vs. ExPASy TrEMBL
Match: A0A1S4DUS9 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo OX=3656 GN=LOC103486430 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.3e-129
Identity = 236/284 (83.10%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEEL+P +VIMAAL+TLSPP L+DLSHSIFS+VH  RRRLTFILSSPTLFS TLRHLNSL
Sbjct: 1   MEELEPPSVIMAALATLSPPRLTDLSHSIFSEVHQHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLL+ARFLLSALRRLSRPFQ+PSK  P+HPSTA ++P+DLDAAVLLLLLC+VRQH
Sbjct: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAAL TPIT WR+TLCRIYS+SLLTISG+ATGG GA+IPYI+TV RCWKFVGFV S  G
Sbjct: 121 NPAALRTPITKWRATLCRIYSESLLTISGLATGGGGALIPYIDTVVRCWKFVGFVGS-CG 180

Query: 181 GKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILP 240
           GK RREVAASP+AVVELPSVAV GG   VECVICKEEM EGRDAC+LPC+HLFHWLCILP
Sbjct: 181 GKVRREVAASPMAVVELPSVAVGGGGGTVECVICKEEMGEGRDACKLPCDHLFHWLCILP 240

Query: 241 WLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS---PSDGD 281
           WLRKRNTCPCCRFQLPTDD+FGEIQRLW+IL KVGS    SDGD
Sbjct: 241 WLRKRNTCPCCRFQLPTDDVFGEIQRLWEILFKVGSTMCTSDGD 283

[Close]

BLAST of CmaCh06G003360 vs. ExPASy TrEMBL
Match: A0A0A0LAQ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736610 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.1e-128
Identity = 233/284 (82.04%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEEL+P +VI AAL+TLSPP L+DLSHSIFS++H  RRRLTFILSSPTLFS TLRHLNSL
Sbjct: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLL+ARFLLSALRRLSRPFQ+PSK  P+HPSTA ++P+DLDAAVLLLLLC+VRQH
Sbjct: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAAL TPIT WR+TLC+IYSDSLLT+SG+ATGG GA+IPYI+TV RCWKFVGFV S  G
Sbjct: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGS-CG 180

Query: 181 GKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILP 240
           GK RREVAASP+AVVELPSVAV GG  AVECVICKEEM EGRDAC+LPC+HLFHWLCILP
Sbjct: 181 GKVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILP 240

Query: 241 WLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS---PSDGD 281
           WLRKRNTCPCCRFQLPTDD+ GEIQRLW+IL KVGS    SDGD
Sbjct: 241 WLRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 283

[Close]

BLAST of CmaCh06G003360 vs. ExPASy TrEMBL
Match: A0A6J1CX45 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Momordica charantia OX=3673 GN=LOC111015097 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.4e-126
Identity = 229/283 (80.92%), Postives = 248/283 (87.63%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEEL+P TVIMAALS LSP HLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNSL
Sbjct: 30  MEELEPPTVIMAALSALSPLHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSL 89

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLL+ARFLLSALRRL  PFQ P+KS P HPSTA +TPRDLDAAVLLLLLC+VRQH
Sbjct: 90  SLSHKSLLIARFLLSALRRLCHPFQPPAKSLPQHPSTAAITPRDLDAAVLLLLLCEVRQH 149

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETP+  WR+ LCRIYSDS+L+ISGI +GG   ++PY+ETV RCWKFVGFV S  G
Sbjct: 150 NPAALETPLPKWRAALCRIYSDSILSISGIISGGGAVMVPYVETVARCWKFVGFVGS-CG 209

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GK +REVAASPVAVVELPSVA     AVECVICKEEM EGRDACQLPCEHLFHWLCILPW
Sbjct: 210 GKGKREVAASPVAVVELPSVAAAA--AVECVICKEEMGEGRDACQLPCEHLFHWLCILPW 269

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS---PSDGD 281
           LRKRNTCPCCRFQLPTDD+F EIQRLW+IL+K+GS    SDGD
Sbjct: 270 LRKRNTCPCCRFQLPTDDVFAEIQRLWEILLKLGSTITTSDGD 309

[Close]

BLAST of CmaCh06G003360 vs. NCBI nr
Match: XP_023005737.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita maxima])

HSP 1 Score: 570.1 bits (1468), Expect = 1.1e-158
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH
Sbjct: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG
Sbjct: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW
Sbjct: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 280

[Close]

BLAST of CmaCh06G003360 vs. NCBI nr
Match: XP_023538929.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 555.8 bits (1431), Expect = 2.1e-154
Identity = 273/280 (97.50%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLS+KSLL+ARFLLSALRRLSRPFQTPSKSFPHHPSTA VTPRDLDAAVLLLLLCDVRQH
Sbjct: 61  SLSNKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETPIT WRSTLCRIYSDSLLTISGIATGG+GA IPYIETV RCWKFVGFVVSRNG
Sbjct: 121 NPAALETPITRWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNG 180

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW
Sbjct: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 280

[Close]

BLAST of CmaCh06G003360 vs. NCBI nr
Match: KAG6596438.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.4 bits (1430), Expect = 2.7e-154
Identity = 273/280 (97.50%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLL+ARFLLSALRRLSRPFQTPSKSFPHHPSTA VTPRDLDAAVLLLLLCDVRQH
Sbjct: 61  SLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETPIT WRSTLCRIYSDSLLTISGIATGG+GA IPYIETV RCWKFVGFVVSRNG
Sbjct: 121 NPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNG 180

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW
Sbjct: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS SDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 280

[Close]

BLAST of CmaCh06G003360 vs. NCBI nr
Match: XP_022935892.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita moschata])

HSP 1 Score: 552.4 bits (1422), Expect = 2.3e-153
Identity = 272/280 (97.14%), Postives = 274/280 (97.86%), Query Frame = 0


Query: 1   MEELKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60
           MEELKPSTVIMAALSTLS PHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSSPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQH 120
           SLSHKSLL+ARFLLSALRRLSRPFQTPSKSFPHHPSTA VTPRDLDAAVLLLLLCDVRQH
Sbjct: 61  SLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNG 180
           NPAALETPIT WRSTLCRIYSDSLLTISGIATGG+GA IPYIETV RCWKFVGFVVSRNG
Sbjct: 121 NPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNG 180

Query: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240
           GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW
Sbjct: 181 GKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS SDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 280

[Close]

BLAST of CmaCh06G003360 vs. NCBI nr
Match: KAG7027979.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 534.6 bits (1376), Expect = 5.0e-148
Identity = 262/270 (97.04%), Postives = 265/270 (98.15%), Query Frame = 0


Query: 11  MAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLSHKSLLVA 70
           MAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLS+KSLL+A
Sbjct: 1   MAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLSNKSLLIA 60

Query: 71  RFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQHNPAALETPIT 130
           RFLLSALRRLSRPFQTPSKSFPHHPSTA VTPRDLDAAVLLLLLCDVRQHNPAALETPIT
Sbjct: 61  RFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQHNPAALETPIT 120

Query: 131 HWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRNGGKARREVAAS 190
            WRSTLCRIYSDSLLTISGIATGG+GA IPYIETV RCWKFVGFVVSRNGGKARREVAAS
Sbjct: 121 QWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNGGKARREVAAS 180

Query: 191 PVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCC 250
           PVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCC
Sbjct: 181 PVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCC 240

Query: 251 RFQLPTDDIFGEIQRLWDILVKVGSPSDGD 281
           RFQLPTDDIFGEIQRLWDILVKVGS SDGD
Sbjct: 241 RFQLPTDDIFGEIQRLWDILVKVGSSSDGD 270

[Close]

BLAST of CmaCh06G003360 vs. TAIR 10
Match: AT5G02750.1 (RING/U-box superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 3.7e-69
Identity = 148/278 (53.24%), Postives = 182/278 (65.47%), Query Frame = 0


Query: 7   STVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLSHKS 66
           +T+IMA+LS LSP HL++L+HSI S  H  RRRL  +LSSPTLFS TLRHL SLSL  K+
Sbjct: 6   TTIIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRHLLSLSLPDKT 65

Query: 67  LLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTP-RDLDAAVLLLLLCDVRQHNPAAL 126
            L+A  LLS L     P     K   HH S A     RDLDA VLLL LC+  Q +P  L
Sbjct: 66  HLIANHLLSLL----HPLLIHRK---HHSSYAVTMKLRDLDAVVLLLFLCETHQLHPDVL 125

Query: 127 ETPITHWRSTLCRIYSDSLLT-ISGIATGGSGAIIPYIETVGRCWKFVGFV-----VSRN 186
           E    +WR  L   YS+++L+  SG+ T  +G ++PYIET+ RC +FV  +     + R 
Sbjct: 126 EASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPYIETLVRCKRFVDIMGGYNHLRRR 185

Query: 187 GGKARREVAASPVAVVELPSVAVGGCMA-----VECVICKEEMNEGRDACQLPCEHLFHW 246
             K   +V A+  AVV L +V V    A     VECVICKEEM+EGRD C++PC+H FHW
Sbjct: 186 DQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEMSEGRDVCEMPCQHFFHW 245

Query: 247 LCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVK 273
            CILPWL K+NTCP CRFQLPTDD+F EIQRLW+ILVK
Sbjct: 246 KCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

[Close]

BLAST of CmaCh06G003360 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.7e-16
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 191 PVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCC 250
           PV ++E  +   GG +   C +CK+EMN G  A QLPC H +H  CI+PWL+ RNTCP C
Sbjct: 293 PVVLLEGENDDDGGLV---CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVC 352

Query: 251 RFQLPTDD 259
           R++LPTDD
Sbjct: 353 RYELPTDD 357

[Close]

BLAST of CmaCh06G003360 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 5.3e-15
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 189 ASPVAVVELPSVAVGGCMAV----ECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKR 248
           AS  A+  LP+V V   M      +C +C +E  +G D  Q+PC+H+FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 249 NTCPCCRFQLPTDD 259
           N+CP CRF+LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

[Close]

BLAST of CmaCh06G003360 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 207 AVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCCRFQLPTD 258
           AV C +CKEEM  G++  +LPC H +H  CI+PWL  RNTCP CRF+LP+D
Sbjct: 369 AVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of CmaCh06G003360 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-14
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 177 SRNGGKARREVAASPVAVVELPSVAVGGC---MAVECVICKEEMNEGRDACQLPCEHLFH 236
           S NG        AS  A+  LP V +  C       C +C E    G +  ++PC+H+FH
Sbjct: 179 SGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFH 238

Query: 237 WLCILPWLRKRNTCPCCRFQLPTDDI 260
             CI+PWL  RN+CP CRF+LP+D I
Sbjct: 239 GDCIVPWLSIRNSCPVCRFELPSDPI 264

The following BLAST results are available for this feature:

BLAST of CmaCh06G003360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXF8	5.3e-68	53.24	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8LPN7	7.5e-14	47.30	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9P0P0	1.3e-13	47.89	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1	[more]
Q3T0W3	1.7e-13	49.30	E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1	[more]
Q6GPV5	2.2e-13	52.78	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1	[more]

BLAST of CmaCh06G003360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTZ6	5.2e-159	100.00	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1F6V7	1.1e-153	97.14	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S4DUS9	3.3e-129	83.10	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LAQ3	2.1e-128	82.04	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736610 P...	[more]
A0A6J1CX45	3.4e-126	80.92	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of CmaCh06G003360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005737.1	1.1e-158	100.00	E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita maxima]	[more]
XP_023538929.1	2.1e-154	97.50	E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6596438.1	2.7e-154	97.50	E3 ubiquitin-protein ligase SGR9, amyloplastic, partial [Cucurbita argyrosperma ...	[more]
XP_022935892.1	2.3e-153	97.14	E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita moschata]	[more]
KAG7027979.1	5.0e-148	97.04	E3 ubiquitin-protein ligase SGR9, amyloplastic, partial [Cucurbita argyrosperma ...	[more]

BLAST of CmaCh06G003360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02750.1	3.7e-69	53.24	RING/U-box superfamily protein	[more]
AT5G08139.1	3.7e-16	52.94	RING/U-box superfamily protein	[more]
AT3G19950.1	5.3e-15	47.30	RING/U-box superfamily protein	[more]
AT5G60820.1	2.0e-14	58.82	RING/U-box superfamily protein	[more]
AT3G46620.1	4.5e-14	40.70	zinc finger (C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 210..250 e-value: 7.0E-6 score: 35.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 209..251 e-value: 6.3E-11 score: 42.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 210..251 score: 12.1057
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 180..257 e-value: 1.8E-16 score: 61.6
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 3..275
None	No IPR available	PANTHER	PTHR15710:SF67	E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC	coord: 3..275
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 209..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G003360.1	CmaCh06G003360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0009501	amyloplast
molecular_function	GO:0061630	ubiquitin protein ligase activity