
CmaCh06G003200 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCCCCGTCTTCAACTAAAACCCTCCAAAATCCATCCGCAGGAAACTAGTAAGAATCATGAGCTCCTTCAACAACACCGCCAATTTTGATAATCTTCTCCTTCAAACTCTGATGGGCAGGCTCCAAATCCGGCCCCAAAGCAACAACAATCCCATTCTCGCCCAATCTCTCGAAGACCTTCTCTTCGATGCAGCCAATCTCTCCGATGACGACAACGACGAGAACAAAACGCAGCTCGCCAAAGAGGAATCGATGCTCGAGAAAGAGATTATTCGCGTGATTCTCGGTGGGAATACCGATTCACTAAAACCTAATTCCGGCCAGGCTGTTACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATTTATGGGAATTACTTTGAGAGGCTTCAGGGGAAGGTCAATCGCGAGTTGAATAAAAAGGAGGCGGAAGAAGAAGAAGAAGAAGATGATGATGAAAAAGAAGAGAATCTGAGCAAATTGGGTCTTCGGGAGTTGATTGACGGTGGTGATTCGAGTGGCGGTCGCATTCTGCATCGCAATGTCAATGCCAGTTCTCAAAGGTTTCGCATGATTTACTTACTGTTTTTCTGTTTCCTTAGGAAATTATGTTCTTATGAAATTGAACTGAACACAAAAATTTAACCTAACAGTTTAAGGTATAATCAGAAGGCTGTTTTCTGGAAGAAAAATTCATTGAAGTAGCCGCTTAGCTTTTAATCTCACATGCCGTTGGTTCATGTTTTTGCTTGATATATGGTATGATTTTTATTTGTATGCCACAGAGTTATCTGCCCTTCGCCTAGTTCATGGAGTAAATCATCTCTCCCAAGTCTTGTAGTTATTGTGTGGTAGACATAGGTTCACTGCCTATCATTGGAGAAGACTTTTTTTTTTATTGATTAGGTAAAAGGACTTATGGATGGACTTAGACATGACTTTATCCCCTTTATTTTTTCGGTCGAATACTTGTTCTCGATGCCTTTGGGGACGGGAGAGTCCCGCAAGACTCTTTTGGAACAATCGGATGACAGTCACTGTACAAAGAGAATCGATGTCTCTATCTTAGTGTAAGGAAGGATAGAAACTTTAAGGACATCGGGGCATTACTATTCATATTTGGTGGTTGATGGAACTTTAGAAGTGAATATATCGACTAGTAATATTGAAACCTTCATAGTAACCGGAGTTCAGCTAGGGCATAAATGATAGTTCGAGAAAGGAGGTGCTATTGTTGATGGAGTAGAAATTACCATGGCAGAAGCTCAGCCACATGAACCCTCCAGTTGTGATTTTCTATCTGTTCCACTGGAATTTGGTATTGTCGACCATAGACTAATCAGTTCCATTAGAACAGCCATATATTTGGTAAATGAGAAATCTGTAAAACCAATGAGAAATGGCAAGTATCCTAGATAGGTCGTCATTGCCTGTCATATAGGTCCATATAGTGCCACTTCAAAATGATTTTGCATCTTCTCAAGGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTTCCCTCCAACCGATGTGGTATCTCACAATCCACTCCCCTTTGGGCTTTCCCTCTCTACTCGGTGTCCACCCTCCTTCGGTGCTCAATGTCCTCGTTGGCACATCGCCCGGTGTCTGGCTCTAATACCATTTGTAACAGCCAAACCCACCGCTAGCCGATATTGTCCTCTTTGAGCTTTCCCTTTCAGGCTTTGCCTCAAGGCTTTTAAAATGCGTCTGCTGGATAGAGATTTTCAAACCCTTATAAAAAATGATTCATTCCCCTCTCTAACCGATGTGAGATCTCACATTGCTAATGAAGGTAGATGTTCCTGCAAGCTAAAGTTTGGAGCATGCTTTAGTTTCTAGAAAATTTATATAAGACAAAAGGAAGTCTCTTTGATGCAGTCGCTCATATGTGTGTTTTATTTCTGAGAGGCCATATGTGAAGGTTGAATTGTTTGTTGCTTGGAGTTTTAAATGTTATTTCTTATCCTTAGTAATCTCTTGGGATTTCCTCCCCTCGTTTGGCTTGGATTTGAAGGATGACTCAAACCCCATTGCTGCTAGATTGATCACTTACGCTTTATGTGAGATCCCACATTGGTTGGATTTCCTTGTAAGAGTGTGGAAACCTCTCCCTAGCATACGTGTTTTAAAAACTAAGAGGAAGCCCAAAAGGGAATGCCCAAAAAGGACTAGACTTAAGCTTTTACAAATGGTATCAGAGCCAGACACCGGGCGGTGCGCTAGCAAGGACGCTAGCTCTCAAGGGGGGTGGATTATAAGATCTCTGATTGATTGGAGATGGGAACGAAGCATTCCTGATAAGGGTGTGAAAACCTCTCCGTAGCAGACTATTTTAAAAACCTCAAGGGGAAACCCGAAAGGGGAAGCCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGGGCTTGGGCAGTTACTCTTTCATTGGTAACTTTGTTCTAGGAAATGTCGGATATTTCAGACTGACAGAGTTGACAATTTGGTTGAATTCTTAATAATAATCTACTTGTTGAAGATGATTAGTTTTCATTCTAACAATGTTGATCATACACTTACTCCATTTCATTATATATTTTGCCATTAGGTTTTAGTCAGCTGAGTTGCGGTCTTTCGATCATAGAAAGTAGTTCGGATGCCGAAGAACGCTGCTAACGATCATCATTTTACAGATTGCACCTGGGTGTTTCTGCAGTCAGGACACTGAACTTTTTGTGTAAGTTGGACAGTAAATGAAAAGAGATGAATACATAGATTCAGTGACATTGGCTTTGTTTGATCTGTTTCTTCTCCATCCTTTTGAATAATTAATTGCTTTTTGCTCTTTTCAGTTCACTTCTCCAGTGTTGTGTGTTTGTTCTTCATCTCTGCAGGGTTCTTTGCCTTTTACATATTGGTTGCTTCAATTTTTATGCAATTTCATCCATTTTCTGTAAGAGAGGCTCACCACTAATGCTCATTGATCTGTATTTTCTCAGAGTTATGCTATGTTTTTT AATCCCCGTCTTCAACTAAAACCCTCCAAAATCCATCCGCAGGAAACTAGTAAGAATCATGAGCTCCTTCAACAACACCGCCAATTTTGATAATCTTCTCCTTCAAACTCTGATGGGCAGGCTCCAAATCCGGCCCCAAAGCAACAACAATCCCATTCTCGCCCAATCTCTCGAAGACCTTCTCTTCGATGCAGCCAATCTCTCCGATGACGACAACGACGAGAACAAAACGCAGCTCGCCAAAGAGGAATCGATGCTCGAGAAAGAGATTATTCGCGTGATTCTCGGTGGGAATACCGATTCACTAAAACCTAATTCCGGCCAGGCTGTTACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATTTATGGGAATTACTTTGAGAGGCTTCAGGGGAAGGTCAATCGCGAGTTGAATAAAAAGGAGGCGGAAGAAGAAGAAGAAGAAGATGATGATGAAAAAGAAGAGAATCTGAGCAAATTGGGTCTTCGGGAGTTGATTGACGGTGGTGATTCGAGTGGCGGTCGCATTCTGCATCGCAATGTCAATGCCAGTTCTCAAAGGTTTTAGTCAGCTGAGTTGCGGTCTTTCGATCATAGAAAGTAGTTCGGATGCCGAAGAACGCTGCTAACGATCATCATTTTACAGATTGCACCTGGGTGTTTCTGCAGTCAGGACACTGAACTTTTTGTGTAAGTTGGACAGTAAATGAAAAGAGATGAATACATAGATTCAGTGACATTGGCTTTGTTTGATCTGTTTCTTCTCCATCCTTTTGAATAATTAATTGCTTTTTGCTCTTTTCAGTTCACTTCTCCAGTGTTGTGTGTTTGTTCTTCATCTCTGCAGGGTTCTTTGCCTTTTACATATTGGTTGCTTCAATTTTTATGCAATTTCATCCATTTTCTGTAAGAGAGGCTCACCACTAATGCTCATTGATCTGTATTTTCTCAGAGTTATGCTATGTTTTTT ATGAGCTCCTTCAACAACACCGCCAATTTTGATAATCTTCTCCTTCAAACTCTGATGGGCAGGCTCCAAATCCGGCCCCAAAGCAACAACAATCCCATTCTCGCCCAATCTCTCGAAGACCTTCTCTTCGATGCAGCCAATCTCTCCGATGACGACAACGACGAGAACAAAACGCAGCTCGCCAAAGAGGAATCGATGCTCGAGAAAGAGATTATTCGCGTGATTCTCGGTGGGAATACCGATTCACTAAAACCTAATTCCGGCCAGGCTGTTACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATTTATGGGAATTACTTTGAGAGGCTTCAGGGGAAGGTCAATCGCGAGTTGAATAAAAAGGAGGCGGAAGAAGAAGAAGAAGAAGATGATGATGAAAAAGAAGAGAATCTGAGCAAATTGGGTCTTCGGGAGTTGATTGACGGTGGTGATTCGAGTGGCGGTCGCATTCTGCATCGCAATGTCAATGCCAGTTCTCAAAGGTTTTAG MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPILAQSLEDLLFDAANLSDDDNDENKTQLAKEESMLEKEIIRVILGGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNYFERLQGKVNRELNKKEAEEEEEEDDDEKEENLSKLGLRELIDGGDSSGGRILHRNVNASSQRF Homology
BLAST of CmaCh06G003200 vs. ExPASy TrEMBL
Match: A0A6J1KW97 (uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 8.1e-106 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmaCh06G003200 vs. ExPASy TrEMBL
Match: A0A6J1F855 (uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC111441746 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101 Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CmaCh06G003200 vs. ExPASy TrEMBL
Match: A0A6J1CVB7 (uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015123 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95 Identity = 184/206 (89.32%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of CmaCh06G003200 vs. ExPASy TrEMBL
Match: A0A6J1J2Z9 (uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 8.4e-87 Identity = 169/201 (84.08%), Postives = 186/201 (92.54%), Query Frame = 0
BLAST of CmaCh06G003200 vs. ExPASy TrEMBL
Match: A0A6J1F6Q3 (uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC111441374 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85 Identity = 171/205 (83.41%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of CmaCh06G003200 vs. NCBI nr
Match: XP_023005891.1 (uncharacterized protein LOC111498761 [Cucurbita maxima]) HSP 1 Score: 392.9 bits (1008), Expect = 1.7e-105 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmaCh06G003200 vs. NCBI nr
Match: XP_022934613.1 (uncharacterized protein LOC111441746 [Cucurbita moschata]) HSP 1 Score: 379.0 bits (972), Expect = 2.5e-101 Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CmaCh06G003200 vs. NCBI nr
Match: KAG6596424.1 (hypothetical protein SDJN03_09604, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101 Identity = 193/201 (96.02%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CmaCh06G003200 vs. NCBI nr
Match: XP_023538751.1 (uncharacterized protein LOC111799590 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99 Identity = 192/201 (95.52%), Postives = 195/201 (97.01%), Query Frame = 0
BLAST of CmaCh06G003200 vs. NCBI nr
Match: KAG7027966.1 (hypothetical protein SDJN02_09145, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 370.9 bits (951), Expect = 6.8e-99 Identity = 187/198 (94.44%), Postives = 194/198 (97.98%), Query Frame = 0
BLAST of CmaCh06G003200 vs. TAIR 10
Match: AT3G53630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 243.4 bits (620), Expect = 1.5e-64 Identity = 128/200 (64.00%), Postives = 159/200 (79.50%), Query Frame = 0
BLAST of CmaCh06G003200 vs. TAIR 10
Match: AT4G18692.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmaCh06G003200 vs. TAIR 10
Match: AT3G53342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 5.0e-07 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of CmaCh06G003200 vs. TAIR 10
Match: AT1G55710.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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