CmaCh06G003090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G003090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	short-chain dehydrogenase TIC 32, chloroplastic-like
Location	Cma_Chr06: 1470109 .. 1472277 (+)
RNA-Seq Expression	CmaCh06G003090
Synteny	CmaCh06G003090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTACTATCCAAAACCTGCCAAATCCCCATCACATTTACTCCTTCCCCCCACCGCTCCTAAATCCTCTATAAATTTCTTTCCCCTTTTCTCCTCCTCCCATCGCCGCCACCGTCGCCACCGTACCGCCACCGCTTCCACCTTCGTTGACAAATGTCGATCATTTCCCTCATAACTGGATGGCCCGGGCCTAGCGGGTTCGGGTCAGCTTCCACGGCGGAGGAGGTGAGTGAAGGGATCGACGCTGCGAATCTCACCGCCATTGTTACCGGAGGAGCGAGTGGGATCGGGCTGGAAACGGTGAGGGTTTTAGCGATGAGAAAAGTGCACGTGATCATCGGAGCCAGGAATTTGGAGGCTGCAAACAAAGCTAAACACCAATTACTGGAACAGAATCCGGCCGCCAAATTGGACGTTCTTAAGCTTGACCTTTCTTCCATCAAGTCCACCACGGAATTTGCTCATAATTTCCTTGCGCTTAATCTCCCTCTCAATATTTTAATGTAATTTTTTTTTTCTTTTTTTTTTTTAATTTATGAATATTTATTTGATTTTTTTTTAAGTGATTTTTATTTGTGGAATTTCAGAAATAATGCTGGGGTTATGTTTTGCCCGTTTCAACTTTCTGAAGATGGGATAGAGCTGCAGTTTGCCACCAACCACCTTGGTACAATAATTATTTATTTTTATTAATTAATTAAATATTTTTGTTTTTTTTTTATTATTTAATTTATGGTGTTTTTTTAGGTCATTTTCTGTTGACAAACCTACTTCTTGAGAAAATGAAGAGCACTGCCAAAAGCACGGGAATCGAGGGTAGAATTGTCAATTTGTCATCTATTGCTCATGTCCACACTTTTGGGGATGGAATTCGGTTCAATAAAATCAATGATAAGAATGGGTATTTTCCTCTCTTTTTTTTTTTTTTAAATTAATTTTTTTTTTTTTTATGGCTTCAAATTATAATCTAAATTGTTAATTCGTAGGTATTCGGATAAAAGAGCGTATGGGCAGTCAAAACTCGCGAACATTTTACATGTCAAAGAGCTTACTCGTCGATTTAAAGTATGTCTTTAAATTTTTAATTTTAGGAGAATTTGAAATCTTGAGAAATTATAATGATATTAAATAAAATAATTGAATATATTATTATTATTTTGTTGGTTATAGGAAGAGGGTGTGAACATAACAGCGAACGCGGTGCATCCAGGGTTGATAATGACGCCTCTTATGAGGCATTCTATGCTTCTCATGAGTACGACACGTCGTTTCTCTTCTCTTTTCTCCCCACTTTTATCTTCTTATTATTTATTTCATTTTACGACATATCGTAATTTATCATCTCTCTCTCTCTCTCTCTCTCTTTGTAGGGCTTTTGCAGGCTTTCTCCTTCTTTATCTGGAAGAATGTTCCTCAGGTAAATTAAAGCAACTTAATGTTATTATTATTGTTTTGATTAGTTTTTTGAAATATATATTACAAATAGTATGTTCAACTGTTCAAATATTCAAATATCCACTTTACTAGTCTAAAAAATTAAGATAGTTCACTAATAAGGCATCGATGTTAATTTTTTTTAGGGGGCAGCGACAACGTGCTATGTGGCACTCCACCCGAGCTTGAAGGGAGTGAGCGGGAAATACTTTTTGGACTGCAACGAGAAGCGAGCAAGCTCATACGCTAGAGACGAAACACTTGCAAAGAGACTGTGGGACTTCAGCAAGAACTTAATAAATTCATCCTACAAAGTATGAAACGAAGTCATGAGGAAGCTGAACTTTATAAAGAATTAAGAGAGATTAAATAATTTGGTTGTTAGGAAAATATATATAAATATTATATTTTAGTCGATAGTTTTTGTTTTTAAGGATGGTGGTGTTGTGGGCCTTGGAAGGCCGTAGTATTGGTGTTATCATTCCATTCATATTATTTGATAGTGATATTCAATCCATTAACTAAGTTACCTTTATCTTCTAGAATTAGCCTCTATTTTTCCCCCTTGGGCTAATGGGTAAGACCCAATTTCTATAGCCCACCAACCCAAAGTCCATGCACCAGCTTGGGCATAGCCTACCCAACTGGGTTGAAGTCTGTCTATATGGCTCATGATGAACTAAGGCTAAGAACACTTTCACTCTCCAATGTATATGGAAGAAATGCATTTTAACA

mRNA sequence

TATTTACTATCCAAAACCTGCCAAATCCCCATCACATTTACTCCTTCCCCCCACCGCTCCTAAATCCTCTATAAATTTCTTTCCCCTTTTCTCCTCCTCCCATCGCCGCCACCGTCGCCACCGTACCGCCACCGCTTCCACCTTCGTTGACAAATGTCGATCATTTCCCTCATAACTGGATGGCCCGGGCCTAGCGGGTTCGGGTCAGCTTCCACGGCGGAGGAGGTGAGTGAAGGGATCGACGCTGCGAATCTCACCGCCATTGTTACCGGAGGAGCGAGTGGGATCGGGCTGGAAACGGTGAGGGTTTTAGCGATGAGAAAAGTGCACGTGATCATCGGAGCCAGGAATTTGGAGGCTGCAAACAAAGCTAAACACCAATTACTGGAACAGAATCCGGCCGCCAAATTGGACGTTCTTAAGCTTGACCTTTCTTCCATCAAGTCCACCACGGAATTTGCTCATAATTTCCTTGCGCTTAATCTCCCTCTCAATATTTTAATAAATAATGCTGGGGTTATGTTTTGCCCGTTTCAACTTTCTGAAGATGGGATAGAGCTGCAGTTTGCCACCAACCACCTTGGTCATTTTCTGTTGACAAACCTACTTCTTGAGAAAATGAAGAGCACTGCCAAAAGCACGGGAATCGAGGGTAGAATTGTCAATTTGTCATCTATTGCTCATGTCCACACTTTTGGGGATGGAATTCGGTTCAATAAAATCAATGATAAGAATGGGTATTCGGATAAAAGAGCGTATGGGCAGTCAAAACTCGCGAACATTTTACATGTCAAAGAGCTTACTCGTCGATTTAAAGAAGAGGGTGTGAACATAACAGCGAACGCGGTGCATCCAGGGTTGATAATGACGCCTCTTATGAGGCATTCTATGCTTCTCATGAGGCTTTTGCAGGCTTTCTCCTTCTTTATCTGGAAGAATGTTCCTCAGGGGGCAGCGACAACGTGCTATGTGGCACTCCACCCGAGCTTGAAGGGAGTGAGCGGGAAATACTTTTTGGACTGCAACGAGAAGCGAGCAAGCTCATACGCTAGAGACGAAACACTTGCAAAGAGACTGTGGGACTTCAGCAAGAACTTAATAAATTCATCCTACAAAGTATGAAACGAAGTCATGAGGAAGCTGAACTTTATAAAGAATTAAGAGAGATTAAATAATTTGGTTGTTAGGAAAATATATATAAATATTATATTTTAGTCGATAGTTTTTGTTTTTAAGGATGGTGGTGTTGTGGGCCTTGGAAGGCCGTAGTATTGGTGTTATCATTCCATTCATATTATTTGATAGTGATATTCAATCCATTAACTAAGTTACCTTTATCTTCTAGAATTAGCCTCTATTTTTCCCCCTTGGGCTAATGGGTAAGACCCAATTTCTATAGCCCACCAACCCAAAGTCCATGCACCAGCTTGGGCATAGCCTACCCAACTGGGTTGAAGTCTGTCTATATGGCTCATGATGAACTAAGGCTAAGAACACTTTCACTCTCCAATGTATATGGAAGAAATGCATTTTAACA

Coding sequence (CDS)

ATGTCGATCATTTCCCTCATAACTGGATGGCCCGGGCCTAGCGGGTTCGGGTCAGCTTCCACGGCGGAGGAGGTGAGTGAAGGGATCGACGCTGCGAATCTCACCGCCATTGTTACCGGAGGAGCGAGTGGGATCGGGCTGGAAACGGTGAGGGTTTTAGCGATGAGAAAAGTGCACGTGATCATCGGAGCCAGGAATTTGGAGGCTGCAAACAAAGCTAAACACCAATTACTGGAACAGAATCCGGCCGCCAAATTGGACGTTCTTAAGCTTGACCTTTCTTCCATCAAGTCCACCACGGAATTTGCTCATAATTTCCTTGCGCTTAATCTCCCTCTCAATATTTTAATAAATAATGCTGGGGTTATGTTTTGCCCGTTTCAACTTTCTGAAGATGGGATAGAGCTGCAGTTTGCCACCAACCACCTTGGTCATTTTCTGTTGACAAACCTACTTCTTGAGAAAATGAAGAGCACTGCCAAAAGCACGGGAATCGAGGGTAGAATTGTCAATTTGTCATCTATTGCTCATGTCCACACTTTTGGGGATGGAATTCGGTTCAATAAAATCAATGATAAGAATGGGTATTCGGATAAAAGAGCGTATGGGCAGTCAAAACTCGCGAACATTTTACATGTCAAAGAGCTTACTCGTCGATTTAAAGAAGAGGGTGTGAACATAACAGCGAACGCGGTGCATCCAGGGTTGATAATGACGCCTCTTATGAGGCATTCTATGCTTCTCATGAGGCTTTTGCAGGCTTTCTCCTTCTTTATCTGGAAGAATGTTCCTCAGGGGGCAGCGACAACGTGCTATGTGGCACTCCACCCGAGCTTGAAGGGAGTGAGCGGGAAATACTTTTTGGACTGCAACGAGAAGCGAGCAAGCTCATACGCTAGAGACGAAACACTTGCAAAGAGACTGTGGGACTTCAGCAAGAACTTAATAAATTCATCCTACAAAGTATGA

Protein sequence

MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHVIIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNAGVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHTFGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTPLMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYARDETLAKRLWDFSKNLINSSYKV

Homology

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BLAST of CmaCh06G003090 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.4e-120
Identity = 216/318 (67.92%), Postives = 258/318 (81.13%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           M I  ++TG  G SG+GSASTAE+V+  IDA +LTAI+TGG SGIGLE  RVL MR  HV
Sbjct: 1   MEIYGMVTGKAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTSGIGLEAARVLGMRGAHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           II ARN +AAN +K  +L+  P A++D L+LDLSSIKS   F H FLALN+PLNILINNA
Sbjct: 61  IIAARNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIE QFATNH+GHFLLTNLLL+KMKS+A+ +GIEGRIVNLSSIAH +T
Sbjct: 121 GVMFCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           + +GI F+ IND + YS+K+AYGQSKLAN+LH   L+R+ +EEGVNIT N+VHPGLI T 
Sbjct: 181 YTEGIMFDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTN 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           L RHS L M +L+A SFF+WKN+PQGAATTCYVALHP LKGV+GKYF DCN    S++A 
Sbjct: 241 LFRHSGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKGVTGKYFTDCNVTTPSNFAI 300

Query: 301 DETLAKRLWDFSKNLINS 319
           D TLA +LWDFS  L++S
Sbjct: 301 DTTLADKLWDFSIKLVDS 318

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BLAST of CmaCh06G003090 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-119
Identity = 214/318 (67.30%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           M I  ++TG  G SG+GSASTAE+V+  IDA +LTAI+TGG SGIGLE  RVL MR  HV
Sbjct: 1   MEIYGMVTGKAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTSGIGLEAARVLGMRGAHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           II +RN +AAN +K  +L+  P A++D L+LDLSSIKS   F H FLALN+PLNILINNA
Sbjct: 61  IIASRNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIE QFATNH+GHFLLTNLLL+KMKS+A+ +GIEGRIVNLSSIAH +T
Sbjct: 121 GVMFCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           + +GI F+ IND + YS+K+AYGQSKLAN+LH   L+R+ +EEGVNIT N+VHPGLI T 
Sbjct: 181 YTEGIMFDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTN 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           L RHS L M +L+A SFF+WKN+PQGAATTCYVALHP LK V+GKYF DCN    S++A 
Sbjct: 241 LFRHSGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKDVTGKYFADCNVTTPSNFAI 300

Query: 301 DETLAKRLWDFSKNLINS 319
           D TLA +LWDFS  L+ S
Sbjct: 301 DTTLADKLWDFSIKLVES 318

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BLAST of CmaCh06G003090 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.9e-98
Identity = 181/312 (58.01%), Postives = 232/312 (74.36%), Query Frame = 0


Query: 10  WP-----GPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHVIIGA 69
           WP     G SGF  +STAE+V+ GIDA  LTAIVTG +SGIG ET RVLA+R  HVI+G 
Sbjct: 2   WPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMGV 61

Query: 70  RNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNAGVMF 129
           RN+ AA   K  +L+  P+AK+D ++LDLSS+ S  +FA  F +   PLNILINNAG+M 
Sbjct: 62  RNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMA 121

Query: 130 CPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHTFGDG 189
           CPF+LS+D IELQFATNH+GHFLLTNLLL+ MK T + +  EGRIVN++S AH   + +G
Sbjct: 122 CPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEG 181

Query: 190 IRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTPLMRH 249
           IRF+KIND++ Y++ RAYGQSKLAN+LH  +LT+  KE+GVNITAN++HPG I+T L RH
Sbjct: 182 IRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFRH 241

Query: 250 SMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYARDETL 309
           +  +  L+      + KNV QGAATTCYVALHP +KGVSG+YF D N  + + + +D  L
Sbjct: 242 NSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVDL 301

Query: 310 AKRLWDFSKNLI 317
           AK+LWDFS NL+
Sbjct: 302 AKKLWDFSINLV 313

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BLAST of CmaCh06G003090 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-96
Identity = 181/311 (58.20%), Postives = 234/311 (75.24%), Query Frame = 0


Query: 9   GWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHVIIGARNLE 68
           G  G SGF S STAEEV+ G+D   LTAIVTG +SGIG+ET RVL++R VHV++  RN +
Sbjct: 5   GSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVRNTD 64

Query: 69  AANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNAGVMFCPFQ 128
           +  K K  +++Q P AKLDV++LDLSS++S  +FA  + +  LPLN+LINNAG+M CPF 
Sbjct: 65  SGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMACPFM 124

Query: 129 LSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHTFGDGIRFN 188
           LS+D IELQFATNHLGHFLLT LLL+ MKST++ +  EGRIVNLSS AH  ++ +G+RF+
Sbjct: 125 LSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFD 184

Query: 189 KINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTPLMRH-SML 248
           KINDK+ YS  RAYGQSKL N+LH  ELT++ KE+GVNITAN++HPG IMT L R+ +  
Sbjct: 185 KINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYFNPY 244

Query: 249 LMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYARDETLAKR 308
           L   + A + +I K+VPQGAATTCYVAL+P + GVSG+YF D N  +     +D  LAK+
Sbjct: 245 LAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTELAKK 304

Query: 309 LWDFSKNLINS 319
           +WDFS  L +S
Sbjct: 305 VWDFSTKLTDS 315

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BLAST of CmaCh06G003090 vs. ExPASy Swiss-Prot
Match: Q8BYK4 (Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.5e-54
Identity = 125/285 (43.86%), Postives = 172/285 (60.35%), Query Frame = 0


Query: 37  IVTGGASGIGLETVRVLAMRKVHVIIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSI 96
           ++TG  +GIG ET R LA R   V I  R++     A  ++      +++ V KLDLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDT 102

Query: 97  KSTTEFAHNFLALNLPLNILINNAGVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKM 156
           KS   FA  FLA    L+ILINNAGVM CP+  + DG E  F  NHLGHFLLT LLLE++
Sbjct: 103 KSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERL 162

Query: 157 KSTAKSTGIEGRIVNLSSIAHVHTFGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKEL 216
           K +A +     R+VNLSSIAH+      IRF+ +  +  Y    AYG SKLAN+L  +EL
Sbjct: 163 KESAPA-----RVVNLSSIAHLI---GKIRFHDLQGQKRYCSAFAYGHSKLANLLFTREL 222

Query: 217 TRRFKEEGVNITANAVHPGLIMTPLMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALH 276
            +R   +G  +TA AVHPG++++ + R+S LL  L + FS F +K+  QGA T+ + AL 
Sbjct: 223 AKRL--QGTGVTAYAVHPGVVLSEITRNSYLLCLLWRLFSPF-FKSTSQGAQTSLHCALA 282

Query: 277 PSLKGVSGKYFLDCNEKRASSYARDETLAKRLWDFSKNLINSSYK 322
             L+ +SGKYF DC     SS AR++  A+RLW+ S  L+   ++
Sbjct: 283 EDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELLGIQWE 316

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BLAST of CmaCh06G003090 vs. ExPASy TrEMBL
Match: A0A6J1I6C3 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470041 PE=3 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.7e-177
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT
Sbjct: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP
Sbjct: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR
Sbjct: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAKRLWDFSKNLINSSYKV
Sbjct: 301 DETLAKRLWDFSKNLINSSYKV 322

[Close]

BLAST of CmaCh06G003090 vs. ExPASy TrEMBL
Match: A0A6J1G2I1 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450056 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.5e-175
Identity = 317/322 (98.45%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISL+TGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLVTGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLE ANKAK QLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEGANKAKQQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT
Sbjct: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +GDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR
Sbjct: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAKRLWDFSKNLINSSYKV
Sbjct: 301 DETLAKRLWDFSKNLINSSYKV 322

[Close]

BLAST of CmaCh06G003090 vs. ExPASy TrEMBL
Match: A0A1S3B6R4 (short-chain dehydrogenase TIC 32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486400 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 294/322 (91.30%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISLITGWPGPSGFGSASTAE+V++GIDAA LTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLITGWPGPSGFGSASTAEDVTQGIDAACLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLEAANKAK QLLE+NP AKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEAANKAKQQLLEENPTAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIE+QFATNH+GHFLLTNLLLEKMK+TAKSTGIEGRIVNLSSIAH HT
Sbjct: 121 GVMFCPFQLSEDGIEMQFATNHIGHFLLTNLLLEKMKNTAKSTGIEGRIVNLSSIAHAHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +G GIRFNKINDKNGYSDKRAYGQSKLANILHVKEL RRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGGGIRFNKINDKNGYSDKRAYGQSKLANILHVKELNRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSM LMRLLQAF+FFIWK+VPQGA+TTCYVALHP+LKGVSGKYFLD NEKR SSYAR
Sbjct: 241 LMRHSMFLMRLLQAFTFFIWKSVPQGASTTCYVALHPNLKGVSGKYFLDNNEKRPSSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DE LAK+LWDFSK+LI+S  KV
Sbjct: 301 DEKLAKKLWDFSKDLISSKSKV 322

[Close]

BLAST of CmaCh06G003090 vs. ExPASy TrEMBL
Match: A0A6J1CVK5 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111014975 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.8e-162
Identity = 290/322 (90.06%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           M+IISLITGWPGPSGFGSASTAE+V+ GIDA NLTAIVTGGASGIGLETVRVLAMRK HV
Sbjct: 71  MAIISLITGWPGPSGFGSASTAEQVTLGIDATNLTAIVTGGASGIGLETVRVLAMRKAHV 130

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNL+AANKAK QLLE+NP+AKLD+LKLDLSSIKST EFA NF+ALNLPLNILINNA
Sbjct: 131 IIGARNLDAANKAKQQLLEENPSAKLDILKLDLSSIKSTREFAENFIALNLPLNILINNA 190

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLS+DGIE+QFATNHLGHFLLTNLLLEKMK+TAK+TGIEGRIVNLSSIAHVHT
Sbjct: 191 GVMFCPFQLSQDGIEMQFATNHLGHFLLTNLLLEKMKNTAKTTGIEGRIVNLSSIAHVHT 250

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +GDGIRFNKI++KNGYSDKRAYGQSKLANILHVKELTRRF+EEGVNITANAVHPGLIMTP
Sbjct: 251 YGDGIRFNKISEKNGYSDKRAYGQSKLANILHVKELTRRFQEEGVNITANAVHPGLIMTP 310

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAF+FFIWKNVPQGAAT+CYVALHPSLKGVSG+Y+LDCNEKR SS AR
Sbjct: 311 LMRHSMLLMRLLQAFTFFIWKNVPQGAATSCYVALHPSLKGVSGRYYLDCNEKRPSSSAR 370

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAK+LWDFS NLINS  KV
Sbjct: 371 DETLAKKLWDFSNNLINSISKV 392

[Close]

BLAST of CmaCh06G003090 vs. ExPASy TrEMBL
Match: A0A0A0LD76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734860 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 288/322 (89.44%), Postives = 308/322 (95.65%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISLITGWPGPSGFGSASTAE+V++GIDA  LTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLITGWPGPSGFGSASTAEDVTQGIDAGCLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLEAANKAK QLLE+NP AKL+VLKLDLSSIKSTTEFAHNFL LNLPLNILINNA
Sbjct: 61  IIGARNLEAANKAKQQLLEENPNAKLEVLKLDLSSIKSTTEFAHNFLHLNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIE+QFATNHLGHFLLTNLL+EKMK+TAKSTGIEGRIVNLSSIAH HT
Sbjct: 121 GVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLIEKMKNTAKSTGIEGRIVNLSSIAHAHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +G GIRFNKIN+KNGYSDKRAYGQSKLANILHVKEL RRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGGGIRFNKINEKNGYSDKRAYGQSKLANILHVKELNRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHS+ LMRLLQAF+FFIWKNVPQGA+TTCYVALHP+LKGVSG+YFLD NEKR SSYAR
Sbjct: 241 LMRHSLFLMRLLQAFTFFIWKNVPQGASTTCYVALHPNLKGVSGRYFLDNNEKRPSSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DE LA++LWDFSK+LI+S  KV
Sbjct: 301 DEKLARKLWDFSKDLISSKSKV 322

[Close]

BLAST of CmaCh06G003090 vs. NCBI nr
Match: XP_022971268.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 631.7 bits (1628), Expect = 3.4e-177
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT
Sbjct: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP
Sbjct: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR
Sbjct: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAKRLWDFSKNLINSSYKV
Sbjct: 301 DETLAKRLWDFSKNLINSSYKV 322

[Close]

BLAST of CmaCh06G003090 vs. NCBI nr
Match: XP_023540240.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 625.5 bits (1612), Expect = 2.5e-175
Identity = 318/322 (98.76%), Postives = 321/322 (99.69%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISL+TGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLVTGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLEAANKAK QLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEAANKAKQQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT
Sbjct: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +GDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR
Sbjct: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAKRLWDFSKNLINSSYKV
Sbjct: 301 DETLAKRLWDFSKNLINSSYKV 322

[Close]

BLAST of CmaCh06G003090 vs. NCBI nr
Match: XP_022945973.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata] >KAG7027961.1 Short-chain dehydrogenase TIC 32, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 624.0 bits (1608), Expect = 7.1e-175
Identity = 317/322 (98.45%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISL+TGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLVTGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLE ANKAK QLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEGANKAKQQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT
Sbjct: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +GDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR
Sbjct: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAKRLWDFSKNLINSSYKV
Sbjct: 301 DETLAKRLWDFSKNLINSSYKV 322

[Close]

BLAST of CmaCh06G003090 vs. NCBI nr
Match: KAG6596417.1 (Short-chain dehydrogenase TIC 32 B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 622.9 bits (1605), Expect = 1.6e-174
Identity = 316/322 (98.14%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISL+TGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLVTGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLE ANKAK QLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEGANKAKQQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT
Sbjct: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +GDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHP+LKGVSGKYFLDCNEKRASSYAR
Sbjct: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPNLKGVSGKYFLDCNEKRASSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DETLAKRLWDFSKNLINSSYKV
Sbjct: 301 DETLAKRLWDFSKNLINSSYKV 322

[Close]

BLAST of CmaCh06G003090 vs. NCBI nr
Match: XP_008442566.1 (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis melo])

HSP 1 Score: 581.6 bits (1498), Expect = 4.1e-162
Identity = 294/322 (91.30%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           MSIISLITGWPGPSGFGSASTAE+V++GIDAA LTAIVTGGASGIGLETVRVLAMRKVHV
Sbjct: 1   MSIISLITGWPGPSGFGSASTAEDVTQGIDAACLTAIVTGGASGIGLETVRVLAMRKVHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           IIGARNLEAANKAK QLLE+NP AKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA
Sbjct: 61  IIGARNLEAANKAKQQLLEENPTAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPFQLSEDGIE+QFATNH+GHFLLTNLLLEKMK+TAKSTGIEGRIVNLSSIAH HT
Sbjct: 121 GVMFCPFQLSEDGIEMQFATNHIGHFLLTNLLLEKMKNTAKSTGIEGRIVNLSSIAHAHT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           +G GIRFNKINDKNGYSDKRAYGQSKLANILHVKEL RRF+EEGVNITANAVHPGLIMTP
Sbjct: 181 YGGGIRFNKINDKNGYSDKRAYGQSKLANILHVKELNRRFQEEGVNITANAVHPGLIMTP 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           LMRHSM LMRLLQAF+FFIWK+VPQGA+TTCYVALHP+LKGVSGKYFLD NEKR SSYAR
Sbjct: 241 LMRHSMFLMRLLQAFTFFIWKSVPQGASTTCYVALHPNLKGVSGKYFLDNNEKRPSSYAR 300

Query: 301 DETLAKRLWDFSKNLINSSYKV 323
           DE LAK+LWDFSK+LI+S  KV
Sbjct: 301 DEKLAKKLWDFSKDLISSKSKV 322

[Close]

BLAST of CmaCh06G003090 vs. TAIR 10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 456.4 bits (1173), Expect = 1.8e-128
Identity = 224/321 (69.78%), Postives = 271/321 (84.42%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           M + SLITG  GPSGFGSASTAEEV++GIDA NLTAI+TGG  GIG+ET RVL+ R  HV
Sbjct: 1   MGLYSLITGRRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           +IGARN+ AA  AK ++L QN  A++ +L+LDLSSIKS   F   F AL+LPLN+LINNA
Sbjct: 61  VIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCP+QLSEDGIELQFATNH+GHFLLTNLLL+ MK+TAK++G+EGRI+N+SS+AH++T
Sbjct: 121 GVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           + +GI+F+ IND   YSDKRAYGQSKLANILH  EL+R+ +EEGVNITAN+VHPGLI+T 
Sbjct: 181 YQEGIQFDSINDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTN 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           L +H+ LLMR L+ FSF++WKN+PQGAATTCYVALHPS+KGV+GKYF DCNE   S  AR
Sbjct: 241 LFQHTALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLAR 300

Query: 301 DETLAKRLWDFSKNLINSSYK 322
           DETLA++LWDFS  LINS  K
Sbjct: 301 DETLAQKLWDFSVKLINSVSK 321

[Close]

BLAST of CmaCh06G003090 vs. TAIR 10
Match: AT2G37540.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 421.4 bits (1082), Expect = 6.6e-118
Identity = 207/321 (64.49%), Postives = 259/321 (80.69%), Query Frame = 0


Query: 1   MSIISLITGWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHV 60
           M I  ++TG  G SGFGSASTAE+V++ IDA++LTAI+TGG SGIGLE  RVLAMR  HV
Sbjct: 1   MGIYGVMTGKKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHV 60

Query: 61  IIGARNLEAANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNA 120
           II ARN +AAN++K  +L+ NP A++D L++D+SSIKS   F   FLALN+PLNILINNA
Sbjct: 61  IIAARNPKAANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNA 120

Query: 121 GVMFCPFQLSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHT 180
           GVMFCPF+L+EDGIE QFATNH+GHFLLTNLLL+KMKSTA+ +G++GRIVNLSSIAH +T
Sbjct: 121 GVMFCPFKLTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYT 180

Query: 181 FGDGIRFNKINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTP 240
           + +GI+F  IND  GYS++RAYGQSKL+N+LH   L+RR +EEGVNIT N+VHPGL+ T 
Sbjct: 181 YSEGIKFQGINDPAGYSERRAYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPGLVTTN 240

Query: 241 LMRHSMLLMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYAR 300
           L R+S   M++ +A +F  WKN+PQGAATTCYVALHP L+GV+GKYF DCN    S +A 
Sbjct: 241 LFRYSGFSMKVFRAMTFLFWKNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFAT 300

Query: 301 DETLAKRLWDFSKNLINSSYK 322
           + +LA +LWDFS  LI+S  K
Sbjct: 301 NNSLADKLWDFSVFLIDSISK 321

[Close]

BLAST of CmaCh06G003090 vs. TAIR 10
Match: AT4G23430.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 354.8 bits (909), Expect = 7.5e-98
Identity = 181/311 (58.20%), Postives = 234/311 (75.24%), Query Frame = 0


Query: 9   GWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHVIIGARNLE 68
           G  G SGF S STAEEV+ G+D   LTAIVTG +SGIG+ET RVL++R VHV++  RN +
Sbjct: 5   GSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVRNTD 64

Query: 69  AANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNAGVMFCPFQ 128
           +  K K  +++Q P AKLDV++LDLSS++S  +FA  + +  LPLN+LINNAG+M CPF 
Sbjct: 65  SGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMACPFM 124

Query: 129 LSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHTFGDGIRFN 188
           LS+D IELQFATNHLGHFLLT LLL+ MKST++ +  EGRIVNLSS AH  ++ +G+RF+
Sbjct: 125 LSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFD 184

Query: 189 KINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTPLMRH-SML 248
           KINDK+ YS  RAYGQSKL N+LH  ELT++ KE+GVNITAN++HPG IMT L R+ +  
Sbjct: 185 KINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYFNPY 244

Query: 249 LMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYARDETLAKR 308
           L   + A + +I K+VPQGAATTCYVAL+P + GVSG+YF D N  +     +D  LAK+
Sbjct: 245 LAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTELAKK 304

Query: 309 LWDFSKNLINS 319
           +WDFS  L +S
Sbjct: 305 VWDFSTKLTDS 315

[Close]

BLAST of CmaCh06G003090 vs. TAIR 10
Match: AT4G11410.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-97
Identity = 176/306 (57.52%), Postives = 227/306 (74.18%), Query Frame = 0


Query: 10  WPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHVIIGARNLEA 69
           W G SGF + STAEEV+ GID   LTAIVTG +SGIG ET RVLA+R VHV++  RN ++
Sbjct: 6   WKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAVRNTDS 65

Query: 70  ANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNAGVMFCPFQL 129
            N+ + ++L++ P AK+DV+KLDLSS+ S   FA  + +L+LPLN+LINNAG+M CPF L
Sbjct: 66  GNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMACPFLL 125

Query: 130 SEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHTFGDGIRFNK 189
           S D IELQFATNHLGHFLLTNLLLE+MK TA  +  EGRIV +SS  H   + +G++F+K
Sbjct: 126 SSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREGVQFDK 185

Query: 190 INDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTPLMRHSMLLM 249
           IND+  Y+  +AYGQSKL NILH  EL R FKE+GVNITAN++HPG IMT L+R+   + 
Sbjct: 186 INDEARYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSIMTNLLRYHSFIN 245

Query: 250 RLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYARDETLAKRLW 309
            +  A   ++ K++PQGAATTCY ALHP  KGVSG+Y +D N    +S  +D+ LAK+LW
Sbjct: 246 TIGNAVGKYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKDLAKKLW 305

Query: 310 DFSKNL 316
           +FS  L
Sbjct: 306 EFSLRL 311

[Close]

BLAST of CmaCh06G003090 vs. TAIR 10
Match: AT4G23430.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 347.1 bits (889), Expect = 1.6e-95
Identity = 180/311 (57.88%), Postives = 233/311 (74.92%), Query Frame = 0


Query: 9   GWPGPSGFGSASTAEEVSEGIDAANLTAIVTGGASGIGLETVRVLAMRKVHVIIGARNLE 68
           G  G SGF S STAEEV+ G+D   LTAIVTG +SGIG+ET RVL++R VHV++  RN +
Sbjct: 5   GSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVRNTD 64

Query: 69  AANKAKHQLLEQNPAAKLDVLKLDLSSIKSTTEFAHNFLALNLPLNILINNAGVMFCPFQ 128
           +  K K  +++Q P AKLDV++LDLSS++S  +FA  + +  LPLN+LINNAG+M CPF 
Sbjct: 65  SGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMACPFM 124

Query: 129 LSEDGIELQFATNHLGHFLLTNLLLEKMKSTAKSTGIEGRIVNLSSIAHVHTFGDGIRFN 188
           LS+D IELQFATNHLGHFLLT LLL+ MKST++ +  EGRIVNLSS AH  ++ +G+RF+
Sbjct: 125 LSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFD 184

Query: 189 KINDKNGYSDKRAYGQSKLANILHVKELTRRFKEEGVNITANAVHPGLIMTPLMRH-SML 248
           KINDK+  S  RAYGQSKL N+LH  ELT++ KE+GVNITAN++HPG IMT L R+ +  
Sbjct: 185 KINDKS--SSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYFNPY 244

Query: 249 LMRLLQAFSFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEKRASSYARDETLAKR 308
           L   + A + +I K+VPQGAATTCYVAL+P + GVSG+YF D N  +     +D  LAK+
Sbjct: 245 LAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTELAKK 304

Query: 309 LWDFSKNLINS 319
           +WDFS  L +S
Sbjct: 305 VWDFSTKLTDS 313

The following BLAST results are available for this feature:

BLAST of CmaCh06G003090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A078ISJ6	1.4e-120	67.92	Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A0A078IS66	2.6e-119	67.30	Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
Q6RVV4	1.9e-98	58.01	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
A2RVM0	1.1e-96	58.20	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8BYK4	8.5e-54	43.86	Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1	[more]

BLAST of CmaCh06G003090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6C3	1.7e-177	100.00	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1G2I1	3.5e-175	98.45	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3B6R4	2.0e-162	91.30	short-chain dehydrogenase TIC 32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CVK5	9.8e-162	90.06	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3...	[more]
A0A0A0LD76	1.2e-159	89.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734860 PE=4 SV=1	[more]

BLAST of CmaCh06G003090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971268.1	3.4e-177	100.00	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima]	[more]
XP_023540240.1	2.5e-175	98.76	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022945973.1	7.1e-175	98.45	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata] >KAG70...	[more]
KAG6596417.1	1.6e-174	98.14	Short-chain dehydrogenase TIC 32 B, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_008442566.1	4.1e-162	91.30	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis melo]	[more]

BLAST of CmaCh06G003090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02540.1	1.8e-128	69.78	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G37540.1	6.6e-118	64.49	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.2	7.5e-98	58.20	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G11410.1	2.2e-97	57.52	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.1	1.6e-95	57.88	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 161..177 score: 30.79 coord: 35..52 score: 46.5 coord: 111..122 score: 47.12 coord: 225..242 score: 38.13
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 111..122 score: 46.66 coord: 202..221 score: 22.94 coord: 167..175 score: 53.72
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 35..243 e-value: 3.5E-27 score: 95.1
None	No IPR available	GENE3D	3.40.50.720		coord: 25..322 e-value: 9.2E-80 score: 269.8
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 4..319
None	No IPR available	PANTHER	PTHR24320:SF224	SHORT-CHAIN DEHYDROGENASE TIC 32, CHLOROPLASTIC-LIKE	coord: 4..319
None	No IPR available	CDD	cd05327	retinol-DH_like_SDR_c_like	coord: 35..309 e-value: 2.6396E-105 score: 306.844
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 34..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G003090.1	CmaCh06G003090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity