CmaCh06G002230 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G002230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	selT-like protein
Location	Cma_Chr06: 1145183 .. 1148097 (-)
RNA-Seq Expression	CmaCh06G002230
Synteny	CmaCh06G002230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCGTTTGTAAATTTTCCTTTTTCCCCCCCAAATCCTTCTCGTGGAAGTGAGTATCTGGTTCTCGAGAGCTTTGCATTGGTGACTCCGATAGATCGAACACAGATAGTTCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTTACTCCTCCGCCTCCTAAACCGGCCAATCACGCTCCACCTCGAGTTCACTATTAGCCTAAATCGGAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGGTGAATGATTTTAATTTTTGATTGGATTCATCTTGATTTTTGTTCGTTTTTTGTGATATTCAGCAACTTGATTTGTTGTCTTGGTTTTGGAATGCAGAAACAGAGCGGAATCGGAGGAATTGGCCATGACAGCGTTATCAATATCAATTTCTTCGTTTCTTGTTCTTCAGGTAGTTCATCTTCATTATTATAAAAAGTTTGTGTCTATCTGTCTCATTTTAGGCGGAAAGTAAGTGAATCAAACGCTTATGTGGTTTTCCTTCCAGTGTTTTTTCTTAACATCCTTGATGGAAGCGAACCTTTTAATTTCTATCTCTCTAGTGGTTGTTGAGAGTCCCTATGGTGAAAAACTGGTTGTACGCTGGACTGTTCGCTGTTGTTGTTCCTTTAAACTCGATTTCGTTGTTTTATGTTTTTTCTTCTTTATTTTCCACAACGCAGGCCTCTTTTATTATCTTCGACTTTAATTTCATTCCTCGATTTAACAGACGTTTCGATTTCTATACTCTCTTGTGGTTGTTTTTGATAGAATATTACTCTCTAGTGGTTGTTGAGATTCATTATGATGAATAGTTGGTTGTACTTCGGAATTTTCCCTTTTGTTCCTCTAAACTTGATTTTTTTTTTTACTTCTTTAAGCTAAGGTTTCTGTTATTATGTCTATATTCGTCTATTGATCAAACAAACATTTCGATTTCTCTGCTATGAACTATCTAGTGGTTGCTGAGAGTCCTTATGATGAAAAATTAGTCGTACTTTGGAACAACATGATTTCTTTGTTTTTTTTCATTTGATTAGCACAGGTTTCTTTTACTTCTGTAACATCCTCGATTGAACCAGTATTTCAATTTCTCCACCCTTTCGTGGTTGTTGAAAAACTGGCCGTACTCTGCTGCACTGTTGTCGTTCTGTTAAACATTGTCTAAGTTTTTTTTATCATCGTCAACTTCCTCAGTTGAACAAATATTTCAATTTCTCCTCTCTAGCGGCTATTGAGAGTCATTATAATAGAAAACTGGTTGTACTCTTCTTCACTGTTCTTGTTACAGAATCCGAGTTTGAGTGAACATAGGTGCAGACCTCAATTCAGAAATACAATTTGTAATTATTCCATTCGGAGCCAACTTCACATCGTTTGGTACTTAGGTTACCTGATTTGGAGCAAGACAGAAATGGAAGTTTCAATTGACCTCCCCTTTTTGAGTCTGTAATTAAATGAACTTCTCGTGCTTTAGCGTGTCCATTGATAAGCAACTTCATTAGAGTATGTTTGCAAGCTTAATTTAATTAGGTATAAGAACAGGTTAATGTGCAGACTACTCAATGTTTAGGTTTGGGATAAAAAGTGAACTGGATTCACGATGATAGAATTTTGGTCTCTGCTCATAGAGCATAAGAATTGAACACAAGTGGGCCAAAAGTGAACTGGATTTACAATTGTTATTACACGAGATAGTTTTAAAAAGAATTTCACTCGTGAACCCAAGTGGGCCAAAAGTGAACTGGATTTACAATTGTTATTACTCGAGATAGTATTAAAAAGAATTACACGAGATAGTTTTAAAAAGAACTTCACTCGTGAACCCAAGTGGGCCAATAGATCGTCCCAATGTTATTCACAGATAGGAGATGTTATGAACCCGTGGCCATGCATTTGATCCATACGGTTTTGGATGTTTTCATTAAAATGTTGTTGTACCATTATCTCATCTCAATTTGTGGCAGTGCTTATGATTTTACACTTTTTGCAGAGGTACTGCAATAACGATGAAAAATATGCTGGAGTCATCATTTCCTGGACTTGAAGTTATTTTGGCGAATTATCCCCCACCCATCCCAAAGCGTCTTCTCAGTAAAGTAGTACCCGTCGTTCAATTTGGAATCGTTGCAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTTCTTGCGTGCCAATAGGTTTGGAAGCATCGCAAGCAATTGGCTGTTTGGAAATTTTATCCAGTCGTTCTTACAAAGTTCTGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTATGATTCTTTTGAAATCTCATTCTGGTCATTTTTAGTGAGATGCTATTTACTGATCGTATCCATTTTCTGAAGGTCTTTTCGATTTTGAAGGAGCTGTGATTTCCTGGTGAGATCGAGTTGAGAGACGTCATTGGTAGGAAACTTTCTGGGTCGAGATTTGTCAACAACTCGGGAGGATTTTGGTCATAGGTATGTGACTTCTTGTGATCTATACTATCAAATTAACAACTGGTGATGTCATGACAAATCTAATCCTAGTTTATAATAGCCAAGCAGGAGCATGTTTGAGAGAGATCCAGTTTCAATATGCCTATCCTAAACATAATCCCTGTAACGTTTCTTTCCTACGAAATCAAACTTTTAAACTTTCAAATTTCAAAATAACTTGATTTCTACTAATTAATTACCTCCTGTTTCATTAATATTTGAAGCCGCCGATAACCTTTTTGGCTACCTATCAACAGGTACTAGACTTTGCTGGTGAGCAGACCAATGGTATCATTTACTGGTAACTTCGGAAATGTTTGTTTAAAAATGAACTAATGAGTAGTGCAGTAAAGATTTTGATAACAACATCTAGG

mRNA sequence

TTTTCGTTTGTAAATTTTCCTTTTTCCCCCCCAAATCCTTCTCGTGGAAGTGAGTATCTGGTTCTCGAGAGCTTTGCATTGGTGACTCCGATAGATCGAACACAGATAGTTCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTTACTCCTCCGCCTCCTAAACCGGCCAATCACGCTCCACCTCGAGTTCACTATTAGCCTAAATCGGAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACAGAGCGGAATCGGAGGAATTGGCCATGACAGCGTTATCAATATCAATTTCTTCGTTTCTTGTTCTTCAGAATCCGAGTTTGAGTGAACATAGAGGTACTGCAATAACGATGAAAAATATGCTGGAGTCATCATTTCCTGGACTTGAAGTTATTTTGGCGAATTATCCCCCACCCATCCCAAAGCGTCTTCTCAGTAAAGTAGTACCCGTCGTTCAATTTGGAATCGTTGCAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTTCTTGCGTGCCAATAGGTTTGGAAGCATCGCAAGCAATTGGCTGTTTGGAAATTTTATCCAGTCGTTCTTACAAAGTTCTGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCGATTTTGAAGGAGCTGTGATTTCCTGGTGAGATCGAGTTGAGAGACGTCATTGGTAGGAAACTTTCTGGGTCGAGATTTGTCAACAACTCGGGAGGATTTTGGTCATAGCCAAGCAGGAGCATGTTTGAGAGAGATCCAGTTTCAATATGCCTATCCTAAACATAATCCCTGTAACGTTTCTTTCCTACGAAATCAAACTTTTAAACTTTCAAATTTCAAAATAACTTGATTTCTACTAATTAATTACCTCCTGTTTCATTAATATTTGAAGCCGCCGATAACCTTTTTGGCTACCTATCAACAGGTACTAGACTTTGCTGGTGAGCAGACCAATGGTATCATTTACTGGTAACTTCGGAAATGTTTGTTTAAAAATGAACTAATGAGTAGTGCAGTAAAGATTTTGATAACAACATCTAGG

Coding sequence (CDS)

ATGACAGCGTTATCAATATCAATTTCTTCGTTTCTTGTTCTTCAGAATCCGAGTTTGAGTGAACATAGAGGTACTGCAATAACGATGAAAAATATGCTGGAGTCATCATTTCCTGGACTTGAAGTTATTTTGGCGAATTATCCCCCACCCATCCCAAAGCGTCTTCTCAGTAAAGTAGTACCCGTCGTTCAATTTGGAATCGTTGCAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTTCTTGCGTGCCAATAGGTTTGGAAGCATCGCAAGCAATTGGCTGTTTGGAAATTTTATCCAGTCGTTCTTACAAAGTTCTGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCGATTTTGAAGGAGCTGTGA

Protein sequence

MTALSISISSFLVLQNPSLSEHRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKEL

Homology

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BLAST of CmaCh06G002230 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 8.3e-43
Identity = 82/115 (71.30%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           ++GTA++MK MLES FPGL+V+LANYP P PKR+L+KVVPV Q G++  IM GEQIFP +
Sbjct: 69  YKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVVPVAQVGVIGLIMGGEQIFPMI 128

Query: 82  GMA-PPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           G+A PP WY+ LRANRFGS+AS WL GNF+QSFLQSSGAFEV CNGE+VFS LKE
Sbjct: 129 GIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGAFEVSCNGELVFSKLKE 183

[Close]

BLAST of CmaCh06G002230 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-13
Identity = 33/103 (32.04%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 32  MLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYF 91
           +L   +PG+++   NYPP I + + ++V+ +V+  ++  +++G   FP LG+  P ++ +
Sbjct: 103 ILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCVVSGRSPFPTLGLETPTFFQW 162

Query: 92  LRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILK 135
           + +NR  +    +LF N I+  LQS+GAFE+Y   E ++S L+
Sbjct: 163 MLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWSKLE 205

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BLAST of CmaCh06G002230 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 31/103 (30.10%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 32  MLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYF 91
           +L   +P ++V   NY PP     LSK++  ++  I+ ++++    F  LG+  P W+  
Sbjct: 64  LLGEKYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSH 123

Query: 92  LRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILK 135
           ++AN+  +    +  GN +++ L SSGAFE+  N   V+S L+
Sbjct: 124 MQANKIYACMMIFFLGNMLEAQLISSGAFEITLNDVPVWSKLQ 166

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BLAST of CmaCh06G002230 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 3.3e-07
Identity = 28/98 (28.57%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 34  ESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLR 93
           +  +PGL +   N+ P   K  L+++V V + G++A ++ G   F  +G   P       
Sbjct: 94  KEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAH 153

Query: 94  ANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFS 132
            NRF      ++ GN  +S L S+GAFE++   + ++S
Sbjct: 154 YNRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWS 191

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BLAST of CmaCh06G002230 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 3.6e-06
Identity = 25/98 (25.51%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 34  ESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLR 93
           +  +P + +  AN+ P + K  +++ +  V+  ++  ++ G   F R G+  P       
Sbjct: 109 KEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVLVLGGINPFERFGLGYPQILQHAH 168

Query: 94  ANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFS 132
            N+  S    ++ GN ++  L S+GAFEVY   E ++S
Sbjct: 169 GNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWS 206

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BLAST of CmaCh06G002230 vs. ExPASy TrEMBL
Match: A0A6J1I728 (selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470211 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61
Identity = 129/148 (87.16%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MTALSISISSFLVLQNPSLSEH------------RGTAITMKNMLESSFPGLEVILANYP 60
           MTALSISISSFLVLQ   L  +            +GTAITMKNMLESSFPGLEVILANYP
Sbjct: 1   MTALSISISSFLVLQVVHLHYYKKFVSICLILGGKGTAITMKNMLESSFPGLEVILANYP 60

Query: 61  PPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGN 120
           PPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGN
Sbjct: 61  PPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGN 120

Query: 121 FIQSFLQSSGAFEVYCNGEMVFSILKEL 137
           FIQSFLQSSGAFEVYCNGEMVFSILKEL
Sbjct: 121 FIQSFLQSSGAFEVYCNGEMVFSILKEL 148

[Close]

BLAST of CmaCh06G002230 vs. ExPASy TrEMBL
Match: A0A6J1CXI9 (selT-like protein OS=Momordica charantia OX=3673 GN=LOC111015112 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.4e-54
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           +RGTAITMKNMLESSFPG+EVILANYPPP+PKRLLSKVVPVVQFGI+ATIMAGEQIFPRL
Sbjct: 82  YRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIATIMAGEQIFPRL 141

Query: 82  GMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           GMAPPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYC+GEMVFS LKE
Sbjct: 142 GMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCDGEMVFSKLKE 195

[Close]

BLAST of CmaCh06G002230 vs. ExPASy TrEMBL
Match: A0A0A0LCS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.9e-51
Identity = 101/114 (88.60%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           +R TAITMKNMLESSFPG+EVILANYPPP+PKRLLSKVVP VQFGI+  IMAGE IFPRL
Sbjct: 83  YRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPAVQFGIIGIIMAGEHIFPRL 142

Query: 82  GMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           GM PPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYCNGEMVFS LKE
Sbjct: 143 GMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKE 196

[Close]

BLAST of CmaCh06G002230 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.9e-51
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 23  RGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLG 82
           RGTAI MKNMLESSFPG+EVILANYPPP+PKRLLSKVVPVVQFG++  I AGE IFPRLG
Sbjct: 83  RGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGVIGIITAGEHIFPRLG 142

Query: 83  MAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           MAPPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYCNGEMVFS LKE
Sbjct: 143 MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKE 195

[Close]

BLAST of CmaCh06G002230 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.6e-51
Identity = 100/114 (87.72%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           +RGTAI MKNMLESSFPG+EVILANYPPP PKRLLSKVVPVVQFGI+  I+AGE IFPRL
Sbjct: 83  YRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKVVPVVQFGIIGIIVAGEHIFPRL 142

Query: 82  GMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           GM PPPWYY LRANRFGSIAS WLFGNF+QSFLQSSGAFEVYCNGEMVFS LKE
Sbjct: 143 GMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGAFEVYCNGEMVFSKLKE 196

[Close]

BLAST of CmaCh06G002230 vs. NCBI nr
Match: XP_022971513.1 (selT-like protein [Cucurbita maxima])

HSP 1 Score: 245.0 bits (624), Expect = 3.8e-61
Identity = 129/148 (87.16%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MTALSISISSFLVLQNPSLSEH------------RGTAITMKNMLESSFPGLEVILANYP 60
           MTALSISISSFLVLQ   L  +            +GTAITMKNMLESSFPGLEVILANYP
Sbjct: 1   MTALSISISSFLVLQVVHLHYYKKFVSICLILGGKGTAITMKNMLESSFPGLEVILANYP 60

Query: 61  PPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGN 120
           PPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGN
Sbjct: 61  PPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLGMAPPPWYYFLRANRFGSIASNWLFGN 120

Query: 121 FIQSFLQSSGAFEVYCNGEMVFSILKEL 137
           FIQSFLQSSGAFEVYCNGEMVFSILKEL
Sbjct: 121 FIQSFLQSSGAFEVYCNGEMVFSILKEL 148

[Close]

BLAST of CmaCh06G002230 vs. NCBI nr
Match: XP_022145727.1 (selT-like protein [Momordica charantia])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           +RGTAITMKNMLESSFPG+EVILANYPPP+PKRLLSKVVPVVQFGI+ATIMAGEQIFPRL
Sbjct: 82  YRGTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIATIMAGEQIFPRL 141

Query: 82  GMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           GMAPPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYC+GEMVFS LKE
Sbjct: 142 GMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCDGEMVFSKLKE 195

[Close]

BLAST of CmaCh06G002230 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.5e-52
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           +RGTAI MKNMLESSFPG+EVILANYPPP PKRLLSKVVPVVQFGI+ TIMAGE IFPRL
Sbjct: 83  YRGTAIAMKNMLESSFPGVEVILANYPPPFPKRLLSKVVPVVQFGIIGTIMAGEHIFPRL 142

Query: 82  GMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           GMAPPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYCNGEMVFS LKE
Sbjct: 143 GMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKE 196

[Close]

BLAST of CmaCh06G002230 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 8.0e-51
Identity = 101/114 (88.60%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           +R TAITMKNMLESSFPG+EVILANYPPP+PKRLLSKVVP VQFGI+  IMAGE IFPRL
Sbjct: 83  YRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPAVQFGIIGIIMAGEHIFPRL 142

Query: 82  GMAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           GM PPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYCNGEMVFS LKE
Sbjct: 143 GMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKE 196

[Close]

BLAST of CmaCh06G002230 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.7 bits (535), Expect = 8.0e-51
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 23  RGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRLG 82
           RGTAI MKNMLESSFPG+EVILANYPPP+PKRLLSKVVPVVQFG++  I AGE IFPRLG
Sbjct: 83  RGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGVIGIITAGEHIFPRLG 142

Query: 83  MAPPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           MAPPPWYY LRANRFGSIAS WLFGNFIQSFLQSSGAFEVYCNGEMVFS LKE
Sbjct: 143 MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKE 195

[Close]

BLAST of CmaCh06G002230 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor )

HSP 1 Score: 174.5 bits (441), Expect = 5.9e-44
Identity = 82/115 (71.30%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           ++GTA++MK MLES FPGL+V+LANYP P PKR+L+KVVPV Q G++  IM GEQIFP +
Sbjct: 69  YKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVVPVAQVGVIGLIMGGEQIFPMI 128

Query: 82  GMA-PPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           G+A PP WY+ LRANRFGS+AS WL GNF+QSFLQSSGAFEV CNGE+VFS LKE
Sbjct: 129 GIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGAFEVSCNGELVFSKLKE 183

[Close]

BLAST of CmaCh06G002230 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type )

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-43
Identity = 80/115 (69.57%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           ++GTA+TMK MLE++FPGL+VILANYPPP PKRLL+KVVPVVQ G++  I+AG++I P +
Sbjct: 86  YKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLLAKVVPVVQMGVIGMIVAGDRILPMI 145

Query: 82  GMA-PPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           G+  PP W++ LRANRFGS+AS WL GNF+QS+LQSSGAFEV+CNGE VFS LKE
Sbjct: 146 GITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQSSGAFEVHCNGEPVFSKLKE 200

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BLAST of CmaCh06G002230 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type )

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-43
Identity = 80/115 (69.57%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 22  HRGTAITMKNMLESSFPGLEVILANYPPPIPKRLLSKVVPVVQFGIVATIMAGEQIFPRL 81
           ++GTA+TMK MLE++FPGL+VILANYPPP PKRLL+KVVPVVQ G++  I+AG++I P +
Sbjct: 85  YKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLLAKVVPVVQMGVIGMIVAGDRILPMI 144

Query: 82  GMA-PPPWYYFLRANRFGSIASNWLFGNFIQSFLQSSGAFEVYCNGEMVFSILKE 136
           G+  PP W++ LRANRFGS+AS WL GNF+QS+LQSSGAFEV+CNGE VFS LKE
Sbjct: 145 GITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQSSGAFEVHCNGEPVFSKLKE 199

The following BLAST results are available for this feature:

BLAST of CmaCh06G002230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STZ2	8.3e-43	71.30	SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2	[more]
Q9BN19	5.2e-13	32.04	Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=510...	[more]
Q9VMV6	1.9e-07	30.10	Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanoga...	[more]
Q19892	3.3e-07	28.57	Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis el...	[more]
Q9U3N5	3.6e-06	25.51	Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis el...	[more]

BLAST of CmaCh06G002230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I728	1.8e-61	87.16	selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470211 PE=4 SV=1	[more]
A0A6J1CXI9	6.4e-54	92.98	selT-like protein OS=Momordica charantia OX=3673 GN=LOC111015112 PE=4 SV=1	[more]
A0A0A0LCS3	3.9e-51	88.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731110 PE=4 SV=1	[more]
A0A6J1F5S6	3.9e-51	89.38	selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1	[more]
E5GBE6	6.6e-51	87.72	Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmaCh06G002230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971513.1	3.8e-61	87.16	selT-like protein [Cucurbita maxima]	[more]
XP_022145727.1	1.3e-53	92.98	selT-like protein [Momordica charantia]	[more]
XP_038903844.1	2.5e-52	91.23	selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Beninca...	[more]
XP_004137713.1	8.0e-51	88.60	selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 ...	[more]
XP_022935564.1	8.0e-51	89.38	selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurb...	[more]

BLAST of CmaCh06G002230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47300.1	5.9e-44	71.30	SELT-like protein precursor	[more]
AT5G58640.1	1.7e-43	69.57	Selenoprotein, Rdx type	[more]
AT5G58640.2	1.7e-43	69.57	Selenoprotein, Rdx type	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011893	Selenoprotein, Rdx-type	TIGRFAM	TIGR02174	TIGR02174	coord: 23..135 e-value: 1.2E-11 score: 42.7
None	No IPR available	PANTHER	PTHR13544:SF5	OS01G0832200 PROTEIN	coord: 21..135
IPR019389	Selenoprotein T	PANTHER	PTHR13544	SELENOPROTEIN T	coord: 21..135
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 23..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G002230.1	CmaCh06G002230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0098869	cellular oxidant detoxification
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0004791	thioredoxin-disulfide reductase activity