CmaCh06G002090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G002090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DCD domain-containing protein
Location	Cma_Chr06: 1067455 .. 1074559 (+)
RNA-Seq Expression	CmaCh06G002090
Synteny	CmaCh06G002090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTCTTCCGAAAAGCAAATTCAAAGTTCAAAAGGATCTTTAAACAACATCGGTAAGTTCTAGAGATCAACCACAACGAGTGGTTATCGACTTGTGTACAACCAAGACTGTGAGCAACAAAGTGGGGTGCTAAGAGAAACAAATATGATCGTGATCACTAACCTGACATATTGCATTTTTAATCTTCTAGTTAATTGAGTTCACCTTAGTTCCCTAAAACACCTACTTATTGAGGTGCTATTGGACAAGGAATGTAATAGCTCAAGCTCACCGCTAATGGATATTCTTTTGACTTTCCTTATCGGGTTTCCTCTTAAGATTTTTAAAATGCATTTTCTAGGAAGAGGTTTTCACACCCTTGTGAATAATATTTTGTTTCTCTCTCCAACTGATGATGGATCTCACAGTCCACCCCCTCGAGTCCTCTCCAATCGATGTGGGATCTCACGAGGAAGGAGTTAGTTGCCTTCTAAACTCGAGGGAATTGAGCATGAAGACAAACTAGTTAAAGCCATAAAATCTATATTGTTACTATTTGAAGACTAACGAGTCAGTATCAATTATAAGTTGAACCCTGAGCAAAGAAAGTGTCTTGTTAATTTTTTTCAAGCCAATGTCAAGTGTTGACCCTAAGGTGATGGTGCATCGACTTATCATTGACATAGACTTCAAACATGTATAACAAAACTGTCAATCCTTTACGAAACGAAGTCATTGTTGAGATGGACACACTACTTGAGAAAAAGTTTATTTAAAAAAAAATCACAACTTTCCATTGTTATCCACGTGGTGTTAATTTGGAAGATGAATGAAAAGTGGAAGGTATACATCGACTTTATCGACGTGAATAAAGCTTGTTTAATCGAAAAGTTCCATTTTTTAAGAATCAACCAACTTGTAGATGCAACTACTAAACATAAATATCACGTTTTAGAGATGCTTATTCTAAGCCTGATCAAATTCATTTGCACGTTCCCGACTAGAAGAAAACCTCATTTGTCACCAATTGAAAATTTTATTCCTGTAACACGATGTCTCTTGATTTAAAGAATATAGGTACGACATCTAAAAGGATAGTCATAAGATGCTCGGTGTCTCATTGACAAAATATATGTAAGTATATGTTGACGATGTGTTGGAAAAAGTTGGAAGGTTAATGGAAGCCAATCTAGCCGAAGTCGAGATATATAAATTAAAAATATAGTTCCATTTTTATTTTTATTTTTATAATTAGTCTTACTTTTATTTCTTCAACCTTTGAAATTTAGTTGTTTCGATGTTTTTTCCCTGACCGTTAGATTGCAAAAGTTGTGCCATTGATTCCGCATATACGCGACACGTGCAGTCGCATGATTTATACTATAAGCACGGAACACTTGATCTTAGCCTCCACGTTTCTTCACTACATTGAGAGTCCCTCTTCAGCGCGTTGAGAAGCACCTCATTTCGCGCCTTTTATTTTTCTTTTTTTGAGATTTTACACAGTAAAGCACAGCCGCTCTGTTCGTCTCTCTCGCGATTGTGAGAGAGTGAAAGGGAACTTCATTATCGCCTGAAGAATTTCATTTTAGATTTTGTGGAAGTAAGAGTTACCGGATATTGTGATCTCTTATCCTAATCCATCGCTGTGAAAATTTGCTTTGTTCCGACGGTGAGGTCTTCCTTTGTATAGTTCGCCTCAAGACGGAAGGTGCGTTCAGATAGCGAGAATCTCGTTTGATTTAGTGGTTTTTTATTGAAAATGATTCGATATTGTTCTCGTTTTATAGTTGTAGCCATGGATTTCTGATTTTTAGTTTCTTAGAAGTTAGCATTCAAGAAACCTAGTGATATTTGAAGTGCTTATTCCTGTTATCTTTCTTCTTCCGAAGTTTGGTTAGTGGTTTGCGAGTAATACTCGCAGATTTGATGCATTTAAGACGATAAGAACTCCTGGCGAAGTCTGCTATGTATTTTGACATGCGCTTTCGGATGTATCATTAGGCACTTGTTCATATTAGTTAGATAATCTCCGGAATTTAAATATTTTCTTCTGAAACGAATTGTACTCTGCATTTCACTCTAGGATCGTGTTTTCATATACGTCGTGATCGAAGAATTGTTCATTTCTTTCAGATAACATGTTTTTCCTCTCCTGTGCTTAATATTCTTATATGCTTACCGTTTGGAGTCACACCAGAGACCTTCATGAGTACTTTCATACTGTCATGGTAGAAGATTCGCTAATTTCTCATTAGATTTTGTAAATGTCGTTATTTATACAATTTCTTGTTACTAATTGTTTCTTTTGTCCAGCCTTACAATTTACGTTGTTTTTGTTTTTCCCCCTCTATTTGTCGAATTTTTGGAGTTCAGGAAGATCCTTTTGCATTTTGACATACTTTTATGCTTGTACTTTGTAATCGGTGTAGTTTCAGTTGTTCCTTTTGTGTTGCACGTTAATGATCCTTAAAGATTTAAGTGTTTATTTTTACTTTCTCCTCACCGAATCATTTTGACATTATTATATTGCATGCTATATAAATACTGTGTGATCTCTATCTTCTGTGAACTCAATTCATCAGCCAACTATGAATCAACTTTGACCAAATATGAATCACCACACAAAAGCTCAATTTGTTATTAACATTATTAGTGTTCAGTTTTCATACTTCTGCTAATATTTGCTTCTATTTTTTTTTTTTTTTTTCCCTTCTGCTTCCCTCAAATAATTTTACGCTCTTCTTGCAGTTTTCATAGAGCCAAAAGTATGTAATAAATAAGTTATCTCGACTAGATGTGGTTTTCCACTTCAGAACCTACTTCTTCTTTTTATATGTTTTCATAGCAGAAATCCGGAGATAGTTAAAATGGACAATGAATGTTATTCCTGTGGGATGAATTTGTTGTGCGGGATGACACGTGTGACTTTGGTTACAATGTGCAGTGTATTATTTTAGTTTATGATTTTGGCTAGTTTTTTTTTTTCACTCCTATATATGCCTGAATGAATTCAGGAAAGAGAGCTCTATATTTCAAGGCCGGATCTTCTGCTTGATTGAATGCTGCAGCAGTGTCCAGAATTTTGAGCTAGTGTGACCTTGGAAGCGTAACATTTGGATGTACAAACAGCATATGAAGGAGTGTCTTTCCAGCTAGCTTTTTGGTTCGTATCCCCAACTCAATTGATATTTTCTGCTTTTCTTTCCCTTTTTCTTTTACTTCTTTTACTTCTTTTACTGGTTTATATTTACACTTCAGCGCTTTGTTAGTTTAAAGAACATCATTTATTTTATTGGAAATTACACGGTGATATCCAATACTTTGTTCTTCTTCCAATTTTCCTTCCCTCTTCACTCTATGAGTATCCTCTTGTTTTGATTCGTTTTTCTGCCCTTTGATCACTAACATGTCTATTTTTCATCTGTATAGGTTAGCCTTCTCAACAATTTTCATATGTGATCCTGGTTTGCCTTTGTTTCTATTCAACTATAGCGAGAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGATGGACTACTGATGGTTCAGAGAACACTTTTATCCAGCTCAGGTTTTACCAGAAAATTTCCATACTTGTTTCATCTCTCCTAAGTCGCACGGTTGTAAAGATACTCAATGGTCATCACCAAGAAAATGCGGTTCAGTCTTGTTCGGAAGGAGTGCCAACCTATGTTAGAAAATCTGTTCAGACCTATAATTACAACTATGCCCCATTCATTTCTGGTTTGGGCTAGACCATCCTCAGGCAAATAAGTTTATCTCTTTATTGGCATCTCAAGCCGTGGCTCCACATGTACCACAATTTACAATGAGGTGGTGACTTTTTGTACAGGCCTCCCCTCCTTGGAAATAAGGGATGAAAGTGAAAGATCAAACCACAAATTTAGGAGGAGCACTTTGACCTAGCAAGTCAAGTATCAGATGCTGTATATGTTACTTCCTCATTAGACGCAGAAAACAGTGCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAAATACCGAGTATTGCATAAACTACAACTGCCTATAATCATGAAAATCCAGTATTGCCTTCAACAAGTGAGACAGATCATACTAACCTTAATAAGGACATGAATTTGGAGAATAATGGTAGTTTCGGTGAACCAATAAAGTCCATAGAGAGCAATGAAGAGGACTTTGGTTCTGTGACTGAACTTCAACCTCTCATTGCTAAGGTAGTTACGGTATTGCATATATGATTTATATTTTTACGTATCTATGAATCACGGCATCTAATGTGTATTTTAATATTTCATCTCTCGGGTTGTAATTGGTTCAGGAGATACGAGAGCTAAAAAATTCTAAAGCAGATCAAGCTAAGAAAATAGTTTTCTTGGAGGAAAAGCTGGTACGTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTGCTTGCAAAAAATCCACTACTAGAGACTATCTCCCTTCTGCTTGTACGTGCATATGCTTCTGTTGCGTGGTTGAATAGTGAGCTTTACGTTTTTGGTGGTGGTTATGGTTGTGCATGGTATAACACTGGTATTGACTTTTGCTCATATTATCGGATGACTTTGTTTGTGTAGTAAAATAATTTCTCTCATTTTCATTTTTTGCTGTTGAAGTTGGATCATATAACCCGAGACCGATGATTGGACCTTGTGCCCTTGTGTAAATTTGGCCAAGGGAAGCCTTGGAGGCTTTCCAAACTATTTGCTGTTGGTGGTGGAAATTGCATTGAATCCTACTCAGGTGTTTGAAATGCTTGACTTAGATCTTGGACTATGGATTTAGACAAGGTCAATGCTACAAAAGGTAAAATGGTTATTTCTGCCCGTCTCTTATGTTTAATTTTAAGTTTATCCACCTTCTATCTTGTTCCAAAAAATAAAAATAAGTTTATCCACCTCTTTGATAACACATGTTTCATTCGGTTAATTTTGCAAAATAGTTCTACCAAGTGTTGATTATGAGAAACAAATTTGCTTGGAGTTTTCTTTTCTAGCTTAATTGTAGGTCATTTGCCATGCTCGACTTAACCTCGGATATAAATCCATGCAAGGTCAATGCTACCGAGTGAAACATATTCTTTGGCCAATTTGTCTGCTTACCTTCTTAACCTTTGCAGTTGCATTTTATCTGTTCACAATTTTTTATTCTCTTTTTTTTATGAGATGTCGACAATTTCTTTTCACTGCTTGATTATTTTCTTCCGCGATTTGCTGTCAGTGGAGCTCAATGGCGTGCTTAGGTGGGCTTGATGGCAGTGACTATTTGAAGTAAGATATCAGGATTTCTTATCTTTTTTTCTTTTCTTATCCATAAGAGATTTAATCAACGATCTCATTTGTTGCCCTTTGCATTCAAACTTGAGTTGGCTTGAAAGGTACAAAAATAGTTTTCATGGTCTTTCCCAATCTCTGCCTTTTCAGAACTGCTGACAGATTTGATATCCGAGAACATTCGTGGACCCAAATCCTTAGTATGAATGCAGAATGAGGATAGGCCATTCTTTGGTTACTTAAACGATAAACCGTAAGCCATTTCTTGCACTACATTTTCCATGTTTTGTTTACTAGCTTGTGTTTAATATCTAGCATGTGGTAAGTTTTTTCTTTTTTTCTTTTTACACAACTCTTTGTCCCTTTTTGGAAAATACTTGCCCTTTTTATTTAGATCTATTTAGATCAATCGACCAGAGATTATAGACACTCGGTAGAATACTACTACACTTTGCTACTTGAGACTAAAAATTTCTAGAATTTCTAGTGGCAATATAAACATTGGTAGGGTAGAGGGGTATTATAAATGTTCAAAATTTATTCCTAAAATTTTAGTTCACTCTTTCATTTTCTTAAAATATTTAGATATTCTTATTCCTTACATCATTTTTTAAAAACACATAGACAATAGATTCATATAATTATTGGCTAGATCTAATTGAGTTAGGGATGATATTTTAACATTAATGAGTAAGATTAATGCACTCTATCAATTGGGAAAATACACTTACAAGCATAGTTTATAATTTTTCACATCCATTTTGGTAAATTTGTCAGGCCCGTAAGAAATATTCTATACCGTACTTTGTAGTTGTGGTCTTGGGGGATTCGATGGAGATTCCATGGCTTCGAGCGTTCGAGTATCTCATCCACCTTCGACATTGTGGATCGTTGGGGAACCCATGAAAAAGACACGAGGATCGATTTGCAGCAGCTGGAGGCATCAATGAATCCATATGCATAATTGTGGCGGTAAGTTAATGATCTACCATATCCCTTCCTTCAGTAACTCCGAAAAATCAGATTTTCTTATAAAATAATCACAGCGATACTTCAAAGTACAATGCTCTGCTTACCATGAGGTTTGAATTTAAATCAGAATTTTATGTATTAAAATATTTAAACCATGGATTTTTTTATTTTTTATTTTTTTACTGTTAGAATGTTTAAATTATTATTTAAAAAAACGAATATGTGCTGTGCCATAAATGGAAGTGGAAGACCCTACTGCTATTTTGCTATATAGGTTGAGAGTTAAAGGGTGTGGCTGGCAGGAAAAAACGTCGAGGGTTCTAAAGAAAAGCTCTACTTGCACGGTATGTTGGTAAATAATTCAAAAATTCGATAGCTATGAAGATTTTCTCTTGAATAGAAAAGAGGCGGAGGCGTAAGTTACCGACTATTGATCTCACACATATTTGACTAGTAAAGTTCAGTCAAAATTGTTTGACAACTATTTTTATTTTGAAAAGTTAAAAGCCCATGTGATTTAGAAAATGTTTGTTTTTTATTTTTTTTATTTCGAAAAGTTGAGTAGAAAATTTTGGTTATGGAGCAGGCCTAAATGACTATTTATGATAAAAAAAATTAGTAGAAATATATATCTTATCTAGTAAAACTATATAATGCCTTACTATATAATACCATAGGCATGCATCTATTGTCTATACATAGCTGAAGTTTTCTGCACCGTACATATACTTGGAAGTTTATGTTATGGTACCATATCTGTTACCGTACATACTTGAAGTTTTTTGCTATGTTATGGTACCATATTTGTTAC

mRNA sequence

ATGAAAGTCTTCCGAAAAGCAAATTCAAAGTTCAAAAGGATCTTTAAACAACATCGGTTAGCCTTCTCAACAATTTTCATATGTGATCCTGGTTTGCCTTTGTTTCTATTCAACTATAGCGAGAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGATGGACTACTGATGGTTCAGAGAACACTTTTATCCAGCTCAGGTTTTACCAGAAAATTTCCATACTTGTTTCATCTCTCCTAAGTCGCACGGTTGTAAAGATACTCAATGGTCATCACCAAGAAAATGCGGTTCAGTCTTGTTCGGAAGGAGTGCCAACCTATGTTAGAAAATCTGTTCAGACCTATAATTACAACTATGCCCCATTCATTTCTGGTTTGGGCTAGACCATCCTCAGGCCTCCCCTCCTTGGAAATAAGGGATGAAAGTGAAAGATCAAACCACAAATTTAGGAGGAGCACTTTGACCTAGCAAGTCAAGTATCAGATGCTGTATATGTTACTTCCTCATTAGACGCAGAAAACAGTGCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAAATACCGAGTATTGCATAAACTACAACTGCCTATAATCATGAAAATCCAGTATTGCCTTCAACAAGTGAGACAGATCATACTAACCTTAATAAGGACATGAATTTGGAGAATAATGGTAGTTTCGGTGAACCAATAAAGTCCATAGAGAGCAATGAAGAGGACTTTGGTTCTGTGACTGAACTTCAACCTCTCATTGCTAAGGAGATACGAGAGCTAAAAAATTCTAAAGCAGATCAAGCTAAGAAAATAGTTTTCTTGGAGGAAAAGCTGTTGGATCATATAACCCGAGACCGATGATTGGACCTTGTGCCCTTGTGTAAATTTGGCCAAGGGAAGCCTTGGAGGCTTTCCAAACTATTTGCTGTTGGTGGTGGAAATTGCATTGAATCCTACTCAGGTGTTTGAAATGCTTGACTTAGATCTTGGACTATGGATTTAGACAAGGTCAATGCTACAAAAGTGGAGCTCAATGGCGTGCTTAGGTGGGCTTGATGGCAGTGACTATTTGAAAACTGCTGACAGATTTGATATCCGAGAACATTCGTGGACCCAAATCCTTAGTATGAATGCAGAATGAGGATAGGCCATTCTTTGGTTACTTAAACGATAAACCGCCCGTAAGAAATATTCTATACCGTACTTTGTAGTTGTGGTCTTGGGGGATTCGATGGAGATTCCATGGCTTCGAGCGTTCGAGTATCTCATCCACCTTCGACATTGTGGATCGTTGGGGAACCCATGAAAAAGACACGAGGATCGATTTGCAGCAGCTGGAGGCATCAATGAATCCATATGCATAATTGTGGCGGTTGAGAGTTAAAGGGTGTGGCTGGCAGGAAAAAACGTCGAGGGTTCTAAAGAAAAGCTCTACTTGCACGGTATGTTGGTAAATAATTCAAAAATTCGATAGCTATGAAGATTTTCTCTTGAATAGAAAAGAGGCGGAGGCGTAAGTTACCGACTATTGATCTCACACATATTTGACTAGTAAAGTTCAGTCAAAATTGTTTGACAACTATTTTTATTTTGAAAAGTTAAAAGCCCATGTGATTTAGAAAATGTTTGTTTTTTATTTTTTTTATTTCGAAAAGTTGAGTAGAAAATTTTGGTTATGGAGCAGGCCTAAATGACTATTTATGATAAAAAAAATTAGTAGAAATATATATCTTATCTAGTAAAACTATATAATGCCTTACTATATAATACCATAGGCATGCATCTATTGTCTATACATAGCTGAAGTTTTCTGCACCGTACATATACTTGGAAGTTTATGTTATGGTACCATATCTGTTACCGTACATACTTGAAGTTTTTTGCTATGTTATGGTACCATATTTGTTAC

Coding sequence (CDS)

ATGAAAGTCTTCCGAAAAGCAAATTCAAAGTTCAAAAGGATCTTTAAACAACATCGGTTAGCCTTCTCAACAATTTTCATATGTGATCCTGGTTTGCCTTTGTTTCTATTCAACTATAGCGAGAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGATGGACTACTGATGGTTCAGAGAACACTTTTATCCAGCTCAGGTTTTACCAGAAAATTTCCATACTTGTTTCATCTCTCCTAAGTCGCACGGTTGTAAAGATACTCAATGGTCATCACCAAGAAAATGCGGTTCAGTCTTGTTCGGAAGGAGTGCCAACCTATGTTAGAAAATCTGTTCAGACCTATAATTACAACTATGCCCCATTCATTTCTGGTTTGGGCTAG

Protein sequence

MKVFRKANSKFKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSENTFIQLRFYQKISILVSSLLSRTVVKILNGHHQENAVQSCSEGVPTYVRKSVQTYNYNYAPFISGLG

Homology

[Close]

BLAST of CmaCh06G002090 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.8e-06
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 30  PGLPLFLFNYSERNLHVILEAASSGQTNINPYGW 64
           PGLPLFL+NYS   LH I EAAS G TNI+P  W
Sbjct: 223 PGLPLFLYNYSTHQLHGIFEAASFGGTNIDPSAW 256

[Close]

BLAST of CmaCh06G002090 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.2e-06
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 30  PGLPLFLFNYSERNLHVILEAASSGQTNINPYGW 64
           PGLPLFL+NYS   LH + EAAS G TNI+P  W
Sbjct: 110 PGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAW 143

[Close]

BLAST of CmaCh06G002090 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 30  PGLPLFLFNYSERNLHVILEAASSGQTNINPYGW 64
           PGLP+FL+NYS   LH I EAAS G +NI+P  W
Sbjct: 261 PGLPIFLYNYSTHQLHGIFEAASFGGSNIDPTAW 294

[Close]

BLAST of CmaCh06G002090 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.8e-04
Identity = 21/29 (72.41%), Postives = 22/29 (75.86%), Query Frame = 0


Query: 30  PGLPLFLFNYSERNLHVILEAASSGQTNI 59
           PGLPLFL+NYS   LH I EAAS G TNI
Sbjct: 252 PGLPLFLYNYSTHQLHGIYEAASFGGTNI 280

[Close]

BLAST of CmaCh06G002090 vs. ExPASy TrEMBL
Match: A0A5N6RJ86 (DCD domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_017111 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 44/87 (50.57%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYS+R LH I EAAS+GQ NINPYGWTTDGSE 
Sbjct: 54  FKQLFGLPAQHFSYVKNIDPGLPLFLFNYSDRKLHGIFEAASNGQMNINPYGWTTDGSEK 113

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKIL 98
           T    +   ++ +    LL      I+
Sbjct: 114 TLYPAQVQIRVRVQCQPLLENQFKPII 140

[Close]

BLAST of CmaCh06G002090 vs. ExPASy TrEMBL
Match: A0A1U8MEX6 (kelch-like protein 5 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107937080 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYSER LH I EAAS GQ NINPYGWTTDGSE 
Sbjct: 54  FKQLFGLPAQHFSYVRNIDPGLPLFLFNYSERKLHGIFEAASHGQMNINPYGWTTDGSEK 113

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 114 TQYPAQVQIRVRMQCQPLLEEQFRPIISDNY 144

[Close]

BLAST of CmaCh06G002090 vs. ExPASy TrEMBL
Match: A0A5D2P5T3 (DCD domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G196500v1 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYSER LH I EAAS GQ NINPYGWTTDGSE 
Sbjct: 58  FKQLFGLPAQHFSYVRNIDPGLPLFLFNYSERKLHGIFEAASHGQMNINPYGWTTDGSEK 117

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 118 TQYPAQVQIRVRMQCQPLLEEQFRPIISDNY 148

[Close]

BLAST of CmaCh06G002090 vs. ExPASy TrEMBL
Match: A0A5D2P547 (DCD domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G196500v1 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYSER LH I EAAS GQ NINPYGWTTDGSE 
Sbjct: 54  FKQLFGLPAQHFSYVRNIDPGLPLFLFNYSERKLHGIFEAASHGQMNINPYGWTTDGSEK 113

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 114 TQYPAQVQIRVRMQCQPLLEEQFRPIISDNY 144

[Close]

BLAST of CmaCh06G002090 vs. ExPASy TrEMBL
Match: A0A6P4LPN2 (uncharacterized protein LOC108450414 isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108450414 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYSER LH I EAAS GQ NINPYGWTTDGSE 
Sbjct: 58  FKQLFGLPAQHFSYVRNIDPGLPLFLFNYSERKLHGIFEAASHGQMNINPYGWTTDGSEK 117

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 118 TQYPAQVQIRVRMQCQPLLEEQFRPIISDNY 148

[Close]

BLAST of CmaCh06G002090 vs. NCBI nr
Match: KAG7027876.1 (hypothetical protein SDJN02_09053, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.5 bits (267), Expect = 9.5e-20
Identity = 57/95 (60.00%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 42  RNLHVILEAASSGQTNINPYGWTTDGSENTFIQLRFY-QKISILVSSLLSRTVVKILNGH 101
           RNLHVILEAASSGQTNINPYGWTTDGSE T    +   +     V S  S          
Sbjct: 78  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQVLPENFRTCVISPKSHDCKDTQWSS 137

Query: 102 HQENAVQSCSEGVPTYVRKSVQTYNYNYAPFISGL 136
            ++   QSCSE +PT+VRKSVQTY+YNYAPFISGL
Sbjct: 138 PRQCGSQSCSEALPTFVRKSVQTYSYNYAPFISGL 172

[Close]

BLAST of CmaCh06G002090 vs. NCBI nr
Match: KAE8099103.1 (hypothetical protein FH972_017111 [Carpinus fangiana])

HSP 1 Score: 88.2 bits (217), Expect = 6.0e-14
Identity = 44/87 (50.57%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYS+R LH I EAAS+GQ NINPYGWTTDGSE 
Sbjct: 54  FKQLFGLPAQHFSYVKNIDPGLPLFLFNYSDRKLHGIFEAASNGQMNINPYGWTTDGSEK 113

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKIL 98
           T    +   ++ +    LL      I+
Sbjct: 114 TLYPAQVQIRVRVQCQPLLENQFKPII 140

[Close]

BLAST of CmaCh06G002090 vs. NCBI nr
Match: XP_023903305.1 (ring canal kelch protein-like isoform X1 [Quercus suber] >XP_023903306.1 ring canal kelch protein-like isoform X1 [Quercus suber])

HSP 1 Score: 88.2 bits (217), Expect = 6.0e-14
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNY++R LH I EAAS+GQ NINPYGWTTDGSE 
Sbjct: 53  FKQLFGSPAQHFSYVKNIDPGLPLFLFNYNDRKLHGIFEAASNGQMNINPYGWTTDGSER 112

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 113 TSYPAQVQIRVRLRCQPLLENQFKPIISDNY 143

[Close]

BLAST of CmaCh06G002090 vs. NCBI nr
Match: TYI11223.1 (hypothetical protein ES332_A09G196500v1 [Gossypium tomentosum])

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-14
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYSER LH I EAAS GQ NINPYGWTTDGSE 
Sbjct: 58  FKQLFGLPAQHFSYVRNIDPGLPLFLFNYSERKLHGIFEAASHGQMNINPYGWTTDGSEK 117

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 118 TQYPAQVQIRVRMQCQPLLEEQFRPIISDNY 148

[Close]

BLAST of CmaCh06G002090 vs. NCBI nr
Match: TYI11222.1 (hypothetical protein ES332_A09G196500v1 [Gossypium tomentosum] >TYJ19257.1 hypothetical protein E1A91_A09G180300v1 [Gossypium mustelinum])

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-14
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 11  FKRIFKQHRLAFSTIFICDPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSEN 70
           FK++F      FS +   DPGLPLFLFNYSER LH I EAAS GQ NINPYGWTTDGSE 
Sbjct: 54  FKQLFGLPAQHFSYVRNIDPGLPLFLFNYSERKLHGIFEAASHGQMNINPYGWTTDGSEK 113

Query: 71  TFIQLRFYQKISILVSSLLSRTVVKILNGHH 102
           T    +   ++ +    LL      I++ ++
Sbjct: 114 TQYPAQVQIRVRMQCQPLLEEQFRPIISDNY 144

[Close]

BLAST of CmaCh06G002090 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 7.0e-13
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 29 DPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSENT 72
          D GLPLFLFNYS+R LH I EAA  GQ N +PYGWT+DGSE T
Sbjct: 53 DIGLPLFLFNYSDRTLHGIFEAAGCGQLNFDPYGWTSDGSERT 95

[Close]

BLAST of CmaCh06G002090 vs. TAIR 10
Match: AT3G11000.1 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 29 DPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSE 70
          DPGL LFLFNYS+R LH I EAAS G+ NI+   W+ +G++
Sbjct: 46 DPGLTLFLFNYSDRTLHGIFEAASEGKLNIDSKAWSPNGTD 86

[Close]

BLAST of CmaCh06G002090 vs. TAIR 10
Match: AT3G11000.2 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 29  DPGLPLFLFNYSERNLHVILEAASSGQTNINPYGWTTDGSE 70
           DPGL LFLFNYS+R LH I EAAS G+ NI+   W+ +G++
Sbjct: 165 DPGLTLFLFNYSDRTLHGIFEAASEGKLNIDSKAWSPNGTD 205

[Close]

BLAST of CmaCh06G002090 vs. TAIR 10
Match: AT3G27090.1 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.1e-05
Identity = 19/34 (55.88%), Postives = 23/34 (67.65%), Query Frame = 0


Query: 30  PGLPLFLFNYSERNLHVILEAASSGQTNINPYGW 64
           PGLPLFL+NY+   LH I EA + G TNI+   W
Sbjct: 198 PGLPLFLYNYTTHQLHGIFEATTFGGTNIDATAW 231

[Close]

BLAST of CmaCh06G002090 vs. TAIR 10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.1e-05
Identity = 21/29 (72.41%), Postives = 22/29 (75.86%), Query Frame = 0


Query: 30  PGLPLFLFNYSERNLHVILEAASSGQTNI 59
           PGLPLFL+NYS   LH I EAAS G TNI
Sbjct: 252 PGLPLFLYNYSTHQLHGIYEAASFGGTNI 280

The following BLAST results are available for this feature:

BLAST of CmaCh06G002090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TAQ0	4.8e-06	67.65	DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1	[more]
P37707	6.2e-06	64.71	B2 protein OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q5JZR1	2.4e-05	61.76	DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1	[more]
Q8RXN8	5.8e-04	72.41	DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV...	[more]

BLAST of CmaCh06G002090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6RJ86	2.9e-14	50.57	DCD domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_017111 PE=...	[more]
A0A1U8MEX6	3.8e-14	49.45	kelch-like protein 5 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107937080 PE...	[more]
A0A5D2P5T3	3.8e-14	49.45	DCD domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G1965...	[more]
A0A5D2P547	3.8e-14	49.45	DCD domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G1965...	[more]
A0A6P4LPN2	3.8e-14	49.45	uncharacterized protein LOC108450414 isoform X1 OS=Gossypium arboreum OX=29729 G...	[more]

BLAST of CmaCh06G002090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027876.1	9.5e-20	60.00	hypothetical protein SDJN02_09053, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8099103.1	6.0e-14	50.57	hypothetical protein FH972_017111 [Carpinus fangiana]	[more]
XP_023903305.1	6.0e-14	47.25	ring canal kelch protein-like isoform X1 [Quercus suber] >XP_023903306.1 ring ca...	[more]
TYI11223.1	7.8e-14	49.45	hypothetical protein ES332_A09G196500v1 [Gossypium tomentosum]	[more]
TYI11222.1	7.8e-14	49.45	hypothetical protein ES332_A09G196500v1 [Gossypium tomentosum] >TYJ19257.1 hypot...	[more]

BLAST of CmaCh06G002090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01660.1	7.0e-13	72.09	CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IP...	[more]
AT3G11000.1	1.8e-08	58.54	DCD (Development and Cell Death) domain protein	[more]
AT3G11000.2	1.8e-08	58.54	DCD (Development and Cell Death) domain protein	[more]
AT3G27090.1	4.1e-05	55.88	DCD (Development and Cell Death) domain protein	[more]
AT5G42050.1	4.1e-05	72.41	DCD (Development and Cell Death) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013989	Development/cell death domain	SMART	SM00767	dcd	coord: 25..86 e-value: 0.0025 score: -45.7
IPR013989	Development/cell death domain	PFAM	PF10539	Dev_Cell_Death	coord: 12..82 e-value: 6.7E-13 score: 48.6
IPR013989	Development/cell death domain	PROSITE	PS51222	DCD	coord: 1..136 score: 12.622005
IPR044832	DCD domain-containing protein NRP-like	PANTHER	PTHR46034	FAMILY NOT NAMED	coord: 28..71
None	No IPR available	PANTHER	PTHR46034:SF7	INFLUENZA VIRUS NS1A-BINDING PROTEIN	coord: 28..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G002090.1	CmaCh06G002090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034976	response to endoplasmic reticulum stress